RNA–Protein interactions for RNA: ENST00000640909.1

KCNC1-213, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 5

Gene KCNC1, Length 1,270 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-213ENST00000640909 ECHDC1Q9NTX5 307 aa17.15■□□□□ 0.34
KCNC1-213ENST00000640909 MTMR7Q9Y216 660 aa17.15■□□□□ 0.34
KCNC1-213ENST00000640909 USP15Q9Y4E8 981 aaPredicted RBP17.15■□□□□ 0.34
KCNC1-213ENST00000640909 MRVI1Q9Y6F6 885 aa17.15■□□□□ 0.34
KCNC1-213ENST00000640909 MYH7BA7E2Y1 1941 aa17.15■□□□□ 0.34
KCNC1-213ENST00000640909 EIF3JO75822 258 aaKnown RBP17.14■□□□□ 0.33
KCNC1-213ENST00000640909 TOP1P11387 765 aaKnown RBP17.14■□□□□ 0.33
KCNC1-213ENST00000640909 CAMK1Q14012 370 aa17.14■□□□□ 0.33
KCNC1-213ENST00000640909 NKD2Q969F2 451 aaPredicted RBP17.14■□□□□ 0.33
KCNC1-213ENST00000640909 BCL11AQ9H165 835 aa17.14■□□□□ 0.33
KCNC1-213ENST00000640909 PLAGL2Q9UPG8 496 aa17.14■□□□□ 0.33
KCNC1-213ENST00000640909 KIAA1671Q9BY89 1806 aa17.14■□□□□ 0.33
KCNC1-213ENST00000640909 PDHBP11177 359 aa17.13■□□□□ 0.33
KCNC1-213ENST00000640909 SUSD6Q92537 303 aa17.13■□□□□ 0.33
KCNC1-213ENST00000640909 ZNF689Q96CS4 500 aaPredicted RBP17.13■□□□□ 0.33
KCNC1-213ENST00000640909 RMDN3Q96TC7 470 aa17.13■□□□□ 0.33
KCNC1-213ENST00000640909 LRRCC1Q9C099 1032 aa17.13■□□□□ 0.33
KCNC1-213ENST00000640909 FRMPD2Q68DX3 1309 aaPredicted RBP17.13■□□□□ 0.33
KCNC1-213ENST00000640909 GNAT1P11488 350 aa17.12■□□□□ 0.33
KCNC1-213ENST00000640909 BTG3Q14201 252 aaPredicted RBP17.12■□□□□ 0.33
KCNC1-213ENST00000640909 FAM26DQ5JW98 314 aa17.12■□□□□ 0.33
KCNC1-213ENST00000640909 MYSM1Q5VVJ2 828 aa17.12■□□□□ 0.33
KCNC1-213ENST00000640909 MCF2L2Q86YR7 1114 aa17.12■□□□□ 0.33
KCNC1-213ENST00000640909 SIRT2Q8IXJ6 389 aa17.12■□□□□ 0.33
KCNC1-213ENST00000640909 SYTL5Q8TDW5 730 aaPredicted RBP17.12■□□□□ 0.33
KCNC1-213ENST00000640909 RPGRIP1Q96KN7 1286 aa17.12■□□□□ 0.33
KCNC1-213ENST00000640909 C16orf70Q9BSU1 422 aa17.12■□□□□ 0.33
KCNC1-213ENST00000640909 GPCPD1Q9NPB8 672 aa17.12■□□□□ 0.33
KCNC1-213ENST00000640909 TCP11L1Q9NUJ3 509 aa17.12■□□□□ 0.33
KCNC1-213ENST00000640909 ANAPC4Q9UJX5 808 aa17.12■□□□□ 0.33
KCNC1-213ENST00000640909 ABCB11O95342 1321 aa17.12■□□□□ 0.33
KCNC1-213ENST00000640909 PTPRZ1P23471 2315 aaPredicted RBP17.12■□□□□ 0.33
KCNC1-213ENST00000640909 ORC4O43929 436 aa17.11■□□□□ 0.33
KCNC1-213ENST00000640909 RANBP6O60518 1105 aaKnown RBP17.11■□□□□ 0.33
KCNC1-213ENST00000640909 GLP2RO95838 553 aa17.11■□□□□ 0.33
KCNC1-213ENST00000640909 SNHG28P0DPA3 235 aa17.11■□□□□ 0.33
KCNC1-213ENST00000640909 ZNF543Q08ER8 600 aa17.11■□□□□ 0.33
KCNC1-213ENST00000640909 HSDL1Q3SXM5 330 aa17.11■□□□□ 0.33
KCNC1-213ENST00000640909 UBALD2Q8IYN6 164 aa17.11■□□□□ 0.33
KCNC1-213ENST00000640909 GPATCH3Q96I76 525 aa17.11■□□□□ 0.33
KCNC1-213ENST00000640909 SPATA33Q96N06 139 aa17.11■□□□□ 0.33
KCNC1-213ENST00000640909 TAAR1Q96RJ0 339 aa17.11■□□□□ 0.33
KCNC1-213ENST00000640909 TMEM47Q9BQJ4 181 aa17.11■□□□□ 0.33
KCNC1-213ENST00000640909 FAM186AA6NE01 2351 aa17.11■□□□□ 0.33
KCNC1-213ENST00000640909 DNAH14Q0VDD8 3507 aa17.11■□□□□ 0.33
KCNC1-213ENST00000640909 H3BRB1 525 aa17.1■□□□□ 0.33
KCNC1-213ENST00000640909 TREHO43280 583 aa17.1■□□□□ 0.33
KCNC1-213ENST00000640909 CTSHP09668 335 aa17.1■□□□□ 0.33
KCNC1-213ENST00000640909 FGRP09769 529 aa17.1■□□□□ 0.33
KCNC1-213ENST00000640909 USH1GQ495M9 461 aa17.1■□□□□ 0.33
KCNC1-213ENST00000640909 CELF3Q5SZQ8 465 aaKnown RBP17.1■□□□□ 0.33
KCNC1-213ENST00000640909 GPATCH4Q5T3I0 446 aaKnown RBP17.1■□□□□ 0.33
KCNC1-213ENST00000640909 ARHGEF16Q5VV41 709 aa17.1■□□□□ 0.33
KCNC1-213ENST00000640909 ADGRD2Q7Z7M1 963 aa17.1■□□□□ 0.33
KCNC1-213ENST00000640909 TUT1Q9H6E5 874 aaKnown RBP17.1■□□□□ 0.33
KCNC1-213ENST00000640909 COL20A1Q9P218 1284 aa17.1■□□□□ 0.33
KCNC1-213ENST00000640909 BARX2Q9UMQ3 279 aaPredicted RBP17.1■□□□□ 0.33
KCNC1-213ENST00000640909 CCDC171Q6TFL3 1326 aa17.1■□□□□ 0.33
KCNC1-213ENST00000640909 TTC3P53804 2025 aa17.09■□□□□ 0.33
KCNC1-213ENST00000640909 DGKIO75912 1065 aa17.09■□□□□ 0.33
KCNC1-213ENST00000640909 NR3C2P08235 984 aa17.09■□□□□ 0.33
KCNC1-213ENST00000640909 SMIM10L2AP0DMW4 78 aa17.09■□□□□ 0.33
KCNC1-213ENST00000640909 SMIM10L2BP0DMW5 78 aa17.09■□□□□ 0.33
KCNC1-213ENST00000640909 TGFB3P10600 412 aa17.09■□□□□ 0.33
KCNC1-213ENST00000640909 MS4A1P11836 297 aa17.09■□□□□ 0.33
KCNC1-213ENST00000640909 NRIP1P48552 1158 aa17.09■□□□□ 0.33
KCNC1-213ENST00000640909 CMTR2Q8IYT2 770 aaKnown RBP17.09■□□□□ 0.33
KCNC1-213ENST00000640909 ADSSL1Q8N142 457 aa17.09■□□□□ 0.33
KCNC1-213ENST00000640909 SPPL3Q8TCT6 385 aa17.09■□□□□ 0.33
KCNC1-213ENST00000640909 TTC14Q96N46 770 aa17.09■□□□□ 0.33
KCNC1-213ENST00000640909 CDCA3Q99618 268 aaPredicted RBP17.09■□□□□ 0.33
KCNC1-213ENST00000640909 ITGB1P05556 798 aa17.08■□□□□ 0.32
KCNC1-213ENST00000640909 SRGAP2BP0DMP2 458 aa17.08■□□□□ 0.32
KCNC1-213ENST00000640909 MTMR3Q13615 1198 aa17.08■□□□□ 0.32
KCNC1-213ENST00000640909 ZBTB33Q86T24 672 aa17.08■□□□□ 0.32
KCNC1-213ENST00000640909 ATP8B4Q8TF62 1192 aa17.08■□□□□ 0.32
KCNC1-213ENST00000640909 OSBPL7Q9BZF2 842 aa17.08■□□□□ 0.32
KCNC1-213ENST00000640909 RNPEPQ9H4A4 650 aa17.08■□□□□ 0.32
KCNC1-213ENST00000640909 PXMP2Q9NR77 195 aa17.08■□□□□ 0.32
KCNC1-213ENST00000640909 ZBTB40Q9NUA8 1239 aa17.08■□□□□ 0.32
KCNC1-213ENST00000640909 DMXL1Q9Y485 3027 aa17.07■□□□□ 0.32
KCNC1-213ENST00000640909 GGPS1O95749 300 aa17.07■□□□□ 0.32
KCNC1-213ENST00000640909 PDGFBP01127 241 aaPredicted RBP17.07■□□□□ 0.32
KCNC1-213ENST00000640909 HSPD1P10809 573 aaKnown RBP17.07■□□□□ 0.32
KCNC1-213ENST00000640909 DNAJB1P25685 340 aa17.07■□□□□ 0.32
KCNC1-213ENST00000640909 UBE3AQ05086 875 aa17.07■□□□□ 0.32
KCNC1-213ENST00000640909 CTDSPL2Q05D32 466 aa17.07■□□□□ 0.32
KCNC1-213ENST00000640909 TMEM105Q8N8V8 129 aa17.07■□□□□ 0.32
KCNC1-213ENST00000640909 PANK1Q8TE04 598 aa17.07■□□□□ 0.32
KCNC1-213ENST00000640909 POF1BQ8WVV4 589 aa17.07■□□□□ 0.32
KCNC1-213ENST00000640909 NEK1Q96PY6 1258 aa17.07■□□□□ 0.32
KCNC1-213ENST00000640909 CHMP4BQ9H444 224 aaKnown RBP17.07■□□□□ 0.32
KCNC1-213ENST00000640909 EHMT1Q9H9B1 1298 aa17.07■□□□□ 0.32
KCNC1-213ENST00000640909 DDX19BQ9UMR2 479 aa17.07■□□□□ 0.32
KCNC1-213ENST00000640909 SORCS3Q9UPU3 1222 aa17.07■□□□□ 0.32
KCNC1-213ENST00000640909 NR2E1Q9Y466 385 aa17.07■□□□□ 0.32
KCNC1-213ENST00000640909 PLXNA4Q9HCM2 1894 aa17.07■□□□□ 0.32
KCNC1-213ENST00000640909 MYH6P13533 1939 aa17.06■□□□□ 0.32
KCNC1-213ENST00000640909 RIF1Q5UIP0 2472 aaKnown RBP17.06■□□□□ 0.32
KCNC1-213ENST00000640909 CSPG5O95196 566 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms