RNA–Protein interactions for RNA: ENST00000640483.1

CACNA1D-230, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS ALT2 TSL 5

Gene CACNA1D, Length 5,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-230ENST00000640483 TOPORSQ9NS56 1045 aaPredicted RBP10.19□□□□□ -0.78
CACNA1D-230ENST00000640483 STK17AQ9UEE5 414 aa10.19□□□□□ -0.78
CACNA1D-230ENST00000640483 SCRN1Q12765 414 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 RINT1Q6NUQ1 792 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 MAP7D3Q8IWC1 876 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 LRRC4Q9HBW1 653 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 FEZ2Q9UHY8 353 aaPredicted RBP10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 IPO11Q9UI26 975 aaKnown RBP10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 GMPSP49915 693 aaPredicted RBP10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 TWF2Q6IBS0 349 aaKnown RBP10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 PPP1R2P3Q6NXS1 205 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 ZNF589Q86UQ0 364 aaPredicted RBP10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 SIX6OS1Q8N1H7 587 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 STAG1Q8WVM7 1258 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 NKIRAS1Q9NYS0 192 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 PCDHA6Q9UN73 950 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 DOLKQ9UPQ8 538 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 INPP5FQ9Y2H2 1132 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 PCDHA8Q9Y5H6 950 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 PPLO60437 1756 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 FAM196BA6NMK8 535 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 CYP21A2P08686 494 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 CMA1P23946 247 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 NNMTP40261 264 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 HMGCS2P54868 508 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 OSTNP61366 133 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 PPFIA1Q13136 1202 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 BSPRYQ5W0U4 402 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 TYW1BQ6NUM6 668 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 PPP1R18Q6NYC8 613 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 TRMT44Q8IYL2 757 aaKnown RBP10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 RNF139Q8WU17 664 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 FAM184BQ9ULE4 1060 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 THAP12O43422 761 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 CEP104O60308 925 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 RPS6KA1Q15418 735 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 DEFB132Q7Z7B7 95 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 CCDC105Q8IYK2 499 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 SRPK1Q96SB4 655 aaKnown RBP10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 STRBPQ96SI9 672 aaKnown RBP10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 ZNF302Q9NR11 478 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 ZSWIM5Q9P217 1185 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 AMFRQ9UKV5 643 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 MEIS1O00470 390 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 TUBBP07437 444 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 CIITAP33076 1130 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 RECQLP46063 649 aaPredicted RBP10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 ARL4DP49703 201 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 KRT76Q01546 638 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 CCDC157Q569K6 752 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 CFAP57Q96MR6 1250 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 SPATA33Q96N06 139 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 PARVGQ9HBI0 331 aa10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 FARP1Q9Y4F1 1045 aaPredicted RBP10.18□□□□□ -0.78
CACNA1D-230ENST00000640483 UBR1Q8IWV7 1749 aa10.17□□□□□ -0.78
CACNA1D-230ENST00000640483 K7ERI5 159 aa10.17□□□□□ -0.78
CACNA1D-230ENST00000640483 IGKV5-2P06315 115 aa10.17□□□□□ -0.78
CACNA1D-230ENST00000640483 CYP2D6P10635 497 aa10.17□□□□□ -0.78
CACNA1D-230ENST00000640483 FCGRTP55899 365 aa10.17□□□□□ -0.78
CACNA1D-230ENST00000640483 BFSP1Q12934 665 aa10.17□□□□□ -0.78
CACNA1D-230ENST00000640483 PPP2R5CQ13362 524 aa10.17□□□□□ -0.78
CACNA1D-230ENST00000640483 TUBB2AQ13885 445 aa10.17□□□□□ -0.78
CACNA1D-230ENST00000640483 FAM149B1Q96BN6 582 aa10.17□□□□□ -0.78
CACNA1D-230ENST00000640483 MSTO1Q9BUK6 570 aa10.17□□□□□ -0.78
CACNA1D-230ENST00000640483 HTATIP2Q9BUP3 242 aa10.17□□□□□ -0.78
CACNA1D-230ENST00000640483 TUBB2BQ9BVA1 445 aa10.17□□□□□ -0.78
CACNA1D-230ENST00000640483 WDR64B1ANS9 1081 aa10.17□□□□□ -0.78
CACNA1D-230ENST00000640483 PSMD14O00487 310 aa10.17□□□□□ -0.78
CACNA1D-230ENST00000640483 SERPINA10Q9UK55 444 aa10.17□□□□□ -0.78
CACNA1D-230ENST00000640483 SLC4A7Q9Y6M7 1214 aa10.17□□□□□ -0.78
CACNA1D-230ENST00000640483 TGFB2P61812 414 aa10.17□□□□□ -0.78
CACNA1D-230ENST00000640483 C8orf74Q6P047 294 aa10.17□□□□□ -0.78
CACNA1D-230ENST00000640483 KRBA2Q6ZNG9 492 aa10.17□□□□□ -0.78
CACNA1D-230ENST00000640483 SPATA24Q86W54 205 aa10.17□□□□□ -0.78
CACNA1D-230ENST00000640483 TRIM11Q96F44 468 aa10.17□□□□□ -0.78
CACNA1D-230ENST00000640483 CCDC68Q9H2F9 335 aa10.17□□□□□ -0.78
CACNA1D-230ENST00000640483 LDHAP00338 332 aaKnown RBP10.17□□□□□ -0.78
CACNA1D-230ENST00000640483 ABCB4P21439 1286 aa10.17□□□□□ -0.78
CACNA1D-230ENST00000640483 LIFRP42702 1097 aa10.17□□□□□ -0.78
CACNA1D-230ENST00000640483 MTMR2Q13614 643 aa10.17□□□□□ -0.78
CACNA1D-230ENST00000640483 TSTA3Q13630 321 aaPredicted RBP10.17□□□□□ -0.78
CACNA1D-230ENST00000640483 EXOC3L4Q17RC7 722 aa10.17□□□□□ -0.78
CACNA1D-230ENST00000640483 ERCC6LQ2NKX8 1250 aa10.17□□□□□ -0.78
CACNA1D-230ENST00000640483 TKFCQ3LXA3 575 aa10.17□□□□□ -0.78
CACNA1D-230ENST00000640483 FBXO18Q8NFZ0 1043 aa10.17□□□□□ -0.78
CACNA1D-230ENST00000640483 PRIMPOLQ96LW4 560 aa10.17□□□□□ -0.78
CACNA1D-230ENST00000640483 OSBPL3Q9H4L5 887 aa10.17□□□□□ -0.78
CACNA1D-230ENST00000640483 FBXL21Q9UKT6 434 aa10.17□□□□□ -0.78
CACNA1D-230ENST00000640483 CD163L1Q9NR16 1453 aa10.16□□□□□ -0.78
CACNA1D-230ENST00000640483 CCL15-CCL14A0A0B4J2E2 113 aa10.16□□□□□ -0.78
CACNA1D-230ENST00000640483 ERICH4A6NGS2 130 aa10.16□□□□□ -0.78
CACNA1D-230ENST00000640483 SPDYE2BA6NHP3 402 aa10.16□□□□□ -0.78
CACNA1D-230ENST00000640483 SPDYE6P0CI01 402 aa10.16□□□□□ -0.78
CACNA1D-230ENST00000640483 NOLC1Q14978 699 aaKnown RBP eCLIP10.16□□□□□ -0.78
CACNA1D-230ENST00000640483 CCL15Q16663 113 aa10.16□□□□□ -0.78
CACNA1D-230ENST00000640483 C9orf131Q5VYM1 1079 aa10.16□□□□□ -0.78
CACNA1D-230ENST00000640483 FAM186BQ8IYM0 893 aa10.16□□□□□ -0.78
CACNA1D-230ENST00000640483 ANKS4BQ8N8V4 417 aa10.16□□□□□ -0.78
CACNA1D-230ENST00000640483 OR6J1Q8NGC5 347 aa10.16□□□□□ -0.78
CACNA1D-230ENST00000640483 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms