RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 LAMB3Q13751 1172 aa13.66□□□□□ -0.22
SPIN3-236ENST00000640131 ZRSR2Q15696 482 aaKnown RBP13.66□□□□□ -0.22
SPIN3-236ENST00000640131 MFSD4BQ5TF39 518 aa13.66□□□□□ -0.22
SPIN3-236ENST00000640131 RAD9BQ6WBX8 426 aa13.66□□□□□ -0.22
SPIN3-236ENST00000640131 KRT25Q7Z3Z0 450 aa13.66□□□□□ -0.22
SPIN3-236ENST00000640131 SPICE1Q8N0Z3 855 aa13.66□□□□□ -0.22
SPIN3-236ENST00000640131 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.66□□□□□ -0.22
SPIN3-236ENST00000640131 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.66□□□□□ -0.22
SPIN3-236ENST00000640131 KLRG2A4D1S0 409 aaPredicted RBP13.66□□□□□ -0.22
SPIN3-236ENST00000640131 MARCH6O60337 910 aa13.66□□□□□ -0.22
SPIN3-236ENST00000640131 ECE2O60344 883 aa13.66□□□□□ -0.22
SPIN3-236ENST00000640131 UBXN1Q04323 297 aa13.66□□□□□ -0.22
SPIN3-236ENST00000640131 CALCRLQ16602 461 aa13.66□□□□□ -0.22
SPIN3-236ENST00000640131 USH1GQ495M9 461 aa13.66□□□□□ -0.22
SPIN3-236ENST00000640131 FILIP1LQ4L180 1135 aa13.66□□□□□ -0.22
SPIN3-236ENST00000640131 CCDC181Q5TID7 509 aa13.66□□□□□ -0.22
SPIN3-236ENST00000640131 MASTLQ96GX5 879 aa13.66□□□□□ -0.22
SPIN3-236ENST00000640131 SLC39A2Q9NP94 309 aa13.66□□□□□ -0.22
SPIN3-236ENST00000640131 TFR2Q9UP52 801 aa13.66□□□□□ -0.22
SPIN3-236ENST00000640131 ARHGAP6O43182 974 aa13.65□□□□□ -0.22
SPIN3-236ENST00000640131 TFRCP02786 760 aaKnown RBP13.65□□□□□ -0.22
SPIN3-236ENST00000640131 GYPCP04921 128 aa13.65□□□□□ -0.22
SPIN3-236ENST00000640131 HLA-DOAP06340 250 aa13.65□□□□□ -0.22
SPIN3-236ENST00000640131 IDEP14735 1019 aa13.65□□□□□ -0.22
SPIN3-236ENST00000640131 KLK7P49862 253 aa13.65□□□□□ -0.22
SPIN3-236ENST00000640131 COPB1P53618 953 aaKnown RBP13.65□□□□□ -0.22
SPIN3-236ENST00000640131 STK4Q13043 487 aa13.65□□□□□ -0.22
SPIN3-236ENST00000640131 SEPT2Q15019 361 aa13.65□□□□□ -0.22
SPIN3-236ENST00000640131 SPATA21Q7Z572 469 aa13.65□□□□□ -0.22
SPIN3-236ENST00000640131 BCAS4Q8TDM0 211 aa13.65□□□□□ -0.22
SPIN3-236ENST00000640131 CCDC12Q8WUD4 166 aaPredicted RBP13.65□□□□□ -0.22
SPIN3-236ENST00000640131 AKT1S1Q96B36 256 aa13.65□□□□□ -0.22
SPIN3-236ENST00000640131 ATP6V0A4Q9HBG4 840 aa13.65□□□□□ -0.22
SPIN3-236ENST00000640131 MRFAP1Q9Y605 127 aa13.65□□□□□ -0.22
SPIN3-236ENST00000640131 KLRC4O43908 158 aa13.65□□□□□ -0.22
SPIN3-236ENST00000640131 PPP1R12BO60237 982 aaPredicted RBP13.65□□□□□ -0.22
SPIN3-236ENST00000640131 ALDH1B1P30837 517 aa13.65□□□□□ -0.22
SPIN3-236ENST00000640131 CACNB1Q02641 598 aaPredicted RBP13.65□□□□□ -0.22
SPIN3-236ENST00000640131 PDIA5Q14554 519 aa13.65□□□□□ -0.22
SPIN3-236ENST00000640131 DAGLBQ8NCG7 672 aa13.65□□□□□ -0.22
SPIN3-236ENST00000640131 OR8K1Q8NGG5 319 aa13.65□□□□□ -0.22
SPIN3-236ENST00000640131 B4GALNT2Q8NHY0 566 aa13.65□□□□□ -0.22
SPIN3-236ENST00000640131 TBC1D5Q92609 795 aa13.65□□□□□ -0.22
SPIN3-236ENST00000640131 PLEKHG4BQ96PX9 1271 aa13.65□□□□□ -0.22
SPIN3-236ENST00000640131 LZTS2Q9BRK4 669 aa13.65□□□□□ -0.22
SPIN3-236ENST00000640131 MMTAG2Q9BU76 263 aaKnown RBP13.65□□□□□ -0.22
SPIN3-236ENST00000640131 TMEM165Q9HC07 324 aa13.65□□□□□ -0.22
SPIN3-236ENST00000640131 SLX4Q8IY92 1834 aa13.65□□□□□ -0.22
SPIN3-236ENST00000640131 EEF2P13639 858 aaKnown RBP13.64□□□□□ -0.23
SPIN3-236ENST00000640131 ZNF543Q08ER8 600 aa13.64□□□□□ -0.23
SPIN3-236ENST00000640131 E2F5Q15329 346 aa13.64□□□□□ -0.23
SPIN3-236ENST00000640131 MAB21L3Q8N8X9 362 aa13.64□□□□□ -0.23
SPIN3-236ENST00000640131 GLIS3Q8NEA6 775 aa13.64□□□□□ -0.23
SPIN3-236ENST00000640131 MKL1Q969V6 931 aa13.64□□□□□ -0.23
SPIN3-236ENST00000640131 RIOX1Q9H6W3 641 aa13.64□□□□□ -0.23
SPIN3-236ENST00000640131 SAMM50Q9Y512 469 aa13.64□□□□□ -0.23
SPIN3-236ENST00000640131 LTBP1Q14766 1721 aa13.64□□□□□ -0.23
SPIN3-236ENST00000640131 CLRN2A0PK11 232 aa13.64□□□□□ -0.23
SPIN3-236ENST00000640131 CDR1P51861 262 aa13.64□□□□□ -0.23
SPIN3-236ENST00000640131 LRRC41Q15345 812 aa13.64□□□□□ -0.23
SPIN3-236ENST00000640131 TCP11X2Q5H9J9 407 aa13.64□□□□□ -0.23
SPIN3-236ENST00000640131 SLC30A10Q6XR72 485 aa13.64□□□□□ -0.23
SPIN3-236ENST00000640131 SH3BP5LQ7L8J4 393 aa13.64□□□□□ -0.23
SPIN3-236ENST00000640131 RBM12BQ8IXT5 1001 aaKnown RBP13.64□□□□□ -0.23
SPIN3-236ENST00000640131 PROCA1Q8NCQ7 364 aaPredicted RBP13.64□□□□□ -0.23
SPIN3-236ENST00000640131 TCP11Q8WWU5 503 aa13.64□□□□□ -0.23
SPIN3-236ENST00000640131 POLD4Q9HCU8 107 aa13.64□□□□□ -0.23
SPIN3-236ENST00000640131 TBC1D7Q9P0N9 293 aa13.64□□□□□ -0.23
SPIN3-236ENST00000640131 LRWD1Q9UFC0 647 aa13.64□□□□□ -0.23
SPIN3-236ENST00000640131 RWDD2AQ9UIY3 292 aa13.64□□□□□ -0.23
SPIN3-236ENST00000640131 MYH7BA7E2Y1 1941 aa13.64□□□□□ -0.23
SPIN3-236ENST00000640131 EDIL3O43854 480 aa13.63□□□□□ -0.23
SPIN3-236ENST00000640131 TPP2P29144 1249 aaPredicted RBP13.63□□□□□ -0.23
SPIN3-236ENST00000640131 IRAK1P51617 712 aa13.63□□□□□ -0.23
SPIN3-236ENST00000640131 SNCBQ16143 134 aa13.63□□□□□ -0.23
SPIN3-236ENST00000640131 KCNK18Q7Z418 384 aa13.63□□□□□ -0.23
SPIN3-236ENST00000640131 IRF2BP1Q8IU81 584 aa13.63□□□□□ -0.23
SPIN3-236ENST00000640131 RSRC1Q96IZ7 334 aaKnown RBP13.63□□□□□ -0.23
SPIN3-236ENST00000640131 CDK5RAP3Q96JB5 506 aa13.63□□□□□ -0.23
SPIN3-236ENST00000640131 TSGA10Q9BZW7 698 aa13.63□□□□□ -0.23
SPIN3-236ENST00000640131 B4DLN1 442 aa13.63□□□□□ -0.23
SPIN3-236ENST00000640131 H0YIN7 160 aa13.63□□□□□ -0.23
SPIN3-236ENST00000640131 ZSCAN9O15535 394 aaPredicted RBP13.63□□□□□ -0.23
SPIN3-236ENST00000640131 SHOX2O60902 331 aaPredicted RBP13.63□□□□□ -0.23
SPIN3-236ENST00000640131 SMTNP53814 917 aa13.63□□□□□ -0.23
SPIN3-236ENST00000640131 JAG1P78504 1218 aa13.63□□□□□ -0.23
SPIN3-236ENST00000640131 PCMTD1Q96MG8 357 aaPredicted RBP13.63□□□□□ -0.23
SPIN3-236ENST00000640131 ANKZF1Q9H8Y5 726 aa13.63□□□□□ -0.23
SPIN3-236ENST00000640131 EXOC1Q9NV70 894 aa13.63□□□□□ -0.23
SPIN3-236ENST00000640131 FAM198AQ9UFP1 575 aa13.63□□□□□ -0.23
SPIN3-236ENST00000640131 SLC1A4P43007 532 aa13.63□□□□□ -0.23
SPIN3-236ENST00000640131 EN1Q05925 392 aaPredicted RBP13.63□□□□□ -0.23
SPIN3-236ENST00000640131 ZYXQ15942 572 aaKnown RBP13.63□□□□□ -0.23
SPIN3-236ENST00000640131 CERKLQ49MI3 558 aaPredicted RBP13.63□□□□□ -0.23
SPIN3-236ENST00000640131 CCDC40Q4G0X9 1142 aa13.63□□□□□ -0.23
SPIN3-236ENST00000640131 CAPRIN2Q6IMN6 1127 aaKnown RBP13.63□□□□□ -0.23
SPIN3-236ENST00000640131 ADSSL1Q8N142 457 aa13.63□□□□□ -0.23
SPIN3-236ENST00000640131 SNX29Q8TEQ0 813 aa13.63□□□□□ -0.23
SPIN3-236ENST00000640131 PNKPQ96T60 521 aa13.63□□□□□ -0.23
SPIN3-236ENST00000640131 TRIM9Q9C026 710 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms