RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 SPPL2CQ8IUH8 684 aa8.38□□□□□ -1.07
RFC1-217ENST00000639695 ENOX1Q8TC92 643 aaKnown RBP8.38□□□□□ -1.07
RFC1-217ENST00000639695 CAMKK2Q96RR4 588 aa8.38□□□□□ -1.07
RFC1-217ENST00000639695 ALG1Q9BT22 464 aa8.38□□□□□ -1.07
RFC1-217ENST00000639695 PHF20Q9BVI0 1012 aa8.38□□□□□ -1.07
RFC1-217ENST00000639695 MBD1Q9UIS9 605 aaPredicted RBP8.38□□□□□ -1.07
RFC1-217ENST00000639695 TRHDEQ9UKU6 1024 aa8.38□□□□□ -1.07
RFC1-217ENST00000639695 C2orf71A6NGG8 1288 aa8.37□□□□□ -1.07
RFC1-217ENST00000639695 H0Y8X5 98 aa8.37□□□□□ -1.07
RFC1-217ENST00000639695 MEFVO15553 781 aaPredicted RBP8.37□□□□□ -1.07
RFC1-217ENST00000639695 USP2O75604 605 aaPredicted RBP8.37□□□□□ -1.07
RFC1-217ENST00000639695 PRAMEF1O95521 474 aa8.37□□□□□ -1.07
RFC1-217ENST00000639695 F2P00734 622 aa8.37□□□□□ -1.07
RFC1-217ENST00000639695 SDHBP21912 280 aa8.37□□□□□ -1.07
RFC1-217ENST00000639695 EPHB3P54753 998 aa8.37□□□□□ -1.07
RFC1-217ENST00000639695 HDAC1Q13547 482 aaPredicted RBP8.37□□□□□ -1.07
RFC1-217ENST00000639695 CLEC16AQ2KHT3 1053 aa8.37□□□□□ -1.07
RFC1-217ENST00000639695 RGL3Q3MIN7 710 aa8.37□□□□□ -1.07
RFC1-217ENST00000639695 ZNF385BQ569K4 471 aa8.37□□□□□ -1.07
RFC1-217ENST00000639695 ADGRF1Q5T601 910 aa8.37□□□□□ -1.07
RFC1-217ENST00000639695 ACBD5Q5T8D3 534 aaPredicted RBP8.37□□□□□ -1.07
RFC1-217ENST00000639695 TMC3Q7Z5M5 1100 aa8.37□□□□□ -1.07
RFC1-217ENST00000639695 C11orf74Q86VG3 221 aa8.37□□□□□ -1.07
RFC1-217ENST00000639695 KREMEN2Q8NCW0 462 aa8.37□□□□□ -1.07
RFC1-217ENST00000639695 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.37□□□□□ -1.07
RFC1-217ENST00000639695 PMM1Q92871 262 aa8.37□□□□□ -1.07
RFC1-217ENST00000639695 HOOK2Q96ED9 719 aa8.37□□□□□ -1.07
RFC1-217ENST00000639695 EPB41L4AQ9HCS5 686 aaPredicted RBP8.37□□□□□ -1.07
RFC1-217ENST00000639695 GPR27Q9NS67 375 aa8.37□□□□□ -1.07
RFC1-217ENST00000639695 BACE2Q9Y5Z0 518 aa8.37□□□□□ -1.07
RFC1-217ENST00000639695 CBX4O00257 560 aa8.36□□□□□ -1.07
RFC1-217ENST00000639695 MEIS1O00470 390 aa8.36□□□□□ -1.07
RFC1-217ENST00000639695 EIF3JO75822 258 aaKnown RBP8.36□□□□□ -1.07
RFC1-217ENST00000639695 FBXO21O94952 628 aa8.36□□□□□ -1.07
RFC1-217ENST00000639695 CD3EP07766 207 aa8.36□□□□□ -1.07
RFC1-217ENST00000639695 LTBRP36941 435 aa8.36□□□□□ -1.07
RFC1-217ENST00000639695 SEPHS1P49903 392 aa8.36□□□□□ -1.07
RFC1-217ENST00000639695 DUSP4Q13115 394 aa8.36□□□□□ -1.07
RFC1-217ENST00000639695 OS9Q13438 667 aaPredicted RBP8.36□□□□□ -1.07
RFC1-217ENST00000639695 IQCEQ6IPM2 695 aa8.36□□□□□ -1.07
RFC1-217ENST00000639695 DENND5AQ6IQ26 1287 aa8.36□□□□□ -1.07
RFC1-217ENST00000639695 COPS5Q92905 334 aa8.36□□□□□ -1.07
RFC1-217ENST00000639695 MENTQ9BUN1 341 aa8.36□□□□□ -1.07
RFC1-217ENST00000639695 CDH19Q9H159 772 aa8.36□□□□□ -1.07
RFC1-217ENST00000639695 XYLT2Q9H1B5 865 aa8.36□□□□□ -1.07
RFC1-217ENST00000639695 ZNF180Q9UJW8 692 aa8.36□□□□□ -1.07
RFC1-217ENST00000639695 OR14I1A6ND48 311 aa8.35□□□□□ -1.07
RFC1-217ENST00000639695 STXBP3O00186 592 aa8.35□□□□□ -1.07
RFC1-217ENST00000639695 AURKAO14965 403 aa8.35□□□□□ -1.07
RFC1-217ENST00000639695 GSTA4O15217 222 aa8.35□□□□□ -1.07
RFC1-217ENST00000639695 FKBP9O95302 570 aa8.35□□□□□ -1.07
RFC1-217ENST00000639695 THBDP07204 575 aa8.35□□□□□ -1.07
RFC1-217ENST00000639695 CCND1P24385 295 aa8.35□□□□□ -1.07
RFC1-217ENST00000639695 ID4P47928 161 aa8.35□□□□□ -1.07
RFC1-217ENST00000639695 RHBDL3P58872 404 aa8.35□□□□□ -1.07
RFC1-217ENST00000639695 PAK1Q13153 545 aa8.35□□□□□ -1.07
RFC1-217ENST00000639695 MAP9Q49MG5 647 aa8.35□□□□□ -1.07
RFC1-217ENST00000639695 ATP13A4Q4VNC1 1196 aa8.35□□□□□ -1.07
RFC1-217ENST00000639695 E4F1Q66K89 784 aaPredicted RBP8.35□□□□□ -1.07
RFC1-217ENST00000639695 FKBP9P1Q75LS8 142 aa8.35□□□□□ -1.07
RFC1-217ENST00000639695 C14orf80Q86SX3 495 aa8.35□□□□□ -1.07
RFC1-217ENST00000639695 USHBP1Q8N6Y0 703 aa8.35□□□□□ -1.07
RFC1-217ENST00000639695 IGSF22Q8N9C0 903 aa8.35□□□□□ -1.07
RFC1-217ENST00000639695 COG1Q8WTW3 980 aa8.35□□□□□ -1.07
RFC1-217ENST00000639695 KRTAP17-1Q9BYP8 105 aa8.35□□□□□ -1.07
RFC1-217ENST00000639695 GPRC5CQ9NQ84 441 aa8.35□□□□□ -1.07
RFC1-217ENST00000639695 ARVCFO00192 962 aa8.34□□□□□ -1.07
RFC1-217ENST00000639695 GABRDO14764 452 aa8.34□□□□□ -1.07
RFC1-217ENST00000639695 MYL1P05976 194 aa8.34□□□□□ -1.07
RFC1-217ENST00000639695 U2AF1L5P0DN76 240 aaPredicted RBP8.34□□□□□ -1.07
RFC1-217ENST00000639695 KCNA6P17658 529 aa8.34□□□□□ -1.07
RFC1-217ENST00000639695 RPL10P27635 214 aaKnown RBP8.34□□□□□ -1.07
RFC1-217ENST00000639695 SRSF3P84103 164 aaKnown RBP8.34□□□□□ -1.07
RFC1-217ENST00000639695 U2AF1Q01081 240 aaKnown RBP eCLIP8.34□□□□□ -1.07
RFC1-217ENST00000639695 UBE4AQ14139 1066 aa8.34□□□□□ -1.07
RFC1-217ENST00000639695 NFIXQ14938 502 aa8.34□□□□□ -1.07
RFC1-217ENST00000639695 SMC5Q8IY18 1101 aa8.34□□□□□ -1.07
RFC1-217ENST00000639695 NXPE1Q8N323 547 aa8.34□□□□□ -1.07
RFC1-217ENST00000639695 DAGLBQ8NCG7 672 aa8.34□□□□□ -1.07
RFC1-217ENST00000639695 SMC1BQ8NDV3 1235 aa8.34□□□□□ -1.07
RFC1-217ENST00000639695 NPLOC4Q8TAT6 608 aa8.34□□□□□ -1.07
RFC1-217ENST00000639695 FRS2Q8WU20 508 aa8.34□□□□□ -1.07
RFC1-217ENST00000639695 DACT3Q96B18 629 aaPredicted RBP8.34□□□□□ -1.07
RFC1-217ENST00000639695 SYTL4Q96C24 671 aaPredicted RBP8.34□□□□□ -1.07
RFC1-217ENST00000639695 HDAC8Q9BY41 377 aa8.34□□□□□ -1.07
RFC1-217ENST00000639695 TRIM8Q9BZR9 551 aa8.34□□□□□ -1.07
RFC1-217ENST00000639695 NPFFR2Q9Y5X5 522 aa8.34□□□□□ -1.07
RFC1-217ENST00000639695 TMEM82A0PJX8 343 aa8.33□□□□□ -1.08
RFC1-217ENST00000639695 OTOL1A6NHN0 477 aaPredicted RBP8.33□□□□□ -1.08
RFC1-217ENST00000639695 M0R2C6 588 aa8.33□□□□□ -1.08
RFC1-217ENST00000639695 EIF5BO60841 1220 aaKnown RBP8.33□□□□□ -1.08
RFC1-217ENST00000639695 ULK1O75385 1050 aa8.33□□□□□ -1.08
RFC1-217ENST00000639695 GLRX3O76003 335 aaKnown RBP8.33□□□□□ -1.08
RFC1-217ENST00000639695 CT47B1P0C2W7 299 aaPredicted RBP8.33□□□□□ -1.08
RFC1-217ENST00000639695 CYP4F3Q08477 520 aa8.33□□□□□ -1.08
RFC1-217ENST00000639695 KCNAB2Q13303 367 aa8.33□□□□□ -1.08
RFC1-217ENST00000639695 TESK1Q15569 626 aa8.33□□□□□ -1.08
RFC1-217ENST00000639695 SKOR2Q2VWA4 1001 aaPredicted RBP8.33□□□□□ -1.08
RFC1-217ENST00000639695 FAM47CQ5HY64 1035 aa8.33□□□□□ -1.08
RFC1-217ENST00000639695 FAM102BQ5T8I3 360 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms