RNA–Protein interactions for RNA: ENST00000639667.1

HNRNPU-220, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 2

Gene HNRNPU, Length 3,940 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-220ENST00000639667 USP6NLQ92738 828 aa6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 GBP4Q96PP9 640 aa6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 JPH1Q9HDC5 661 aaPredicted RBP6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 UBIAD1Q9Y5Z9 338 aa6.54□□□□□ -1.36
HNRNPU-220ENST00000639667 A0A087WWV3 80 aa6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 SPTLC2O15270 562 aa6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 BRD1O95696 1058 aa6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 UBA1P22314 1058 aaKnown RBP6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 CLK2P49760 499 aaKnown RBP6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 IRX5P78411 483 aaPredicted RBP6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 LAMC2Q13753 1193 aa6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 CSPP1Q1MSJ5 1256 aa6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 KRT79Q5XKE5 535 aa6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 SWSAP1Q6NVH7 229 aa6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 MIS18BP1Q6P0N0 1132 aa6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 TMEM60Q9H2L4 133 aa6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 BMP2KQ9NSY1 1161 aaPredicted RBP6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 TBC1D22BQ9NU19 505 aa6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 ASTN1O14525 1302 aa6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 DDX11L8A8MPP1 907 aa6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 ARIH2O95376 493 aa6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 KRT18P05783 430 aaKnown RBP6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 CDC25AP30304 524 aa6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 PDXDC2PQ6P474 469 aa6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 SNX29Q8TEQ0 813 aa6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 FGD4Q96M96 766 aa6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 SCLT1Q96NL6 688 aa6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 ZHX3Q9H4I2 956 aa6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 AGO4Q9HCK5 861 aaKnown RBP6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 MEIS1O00470 390 aa6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 ZNF865P0CJ78 1059 aaPredicted RBP6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 FSCN1Q16658 493 aaKnown RBP6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 DUSP28Q4G0W2 176 aa6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 FAM160B1Q5W0V3 765 aa6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 MAMDC4Q6UXC1 1216 aa6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 TRPV1Q8NER1 839 aa6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 SEPT1Q8WYJ6 367 aa6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 CALML4Q96GE6 196 aa6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 CLIC6Q96NY7 704 aa6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 INPP4AQ96PE3 977 aaPredicted RBP6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 BCAS3Q9H6U6 928 aa6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 DISC1Q9NRI5 854 aa6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 DDX41Q9UJV9 622 aaKnown RBP6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 PTPRFP10586 1907 aa6.53□□□□□ -1.36
HNRNPU-220ENST00000639667 POTEMA6NI47 508 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 SPATA31C2B4DYI2 1134 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 MAFGO15525 162 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 MSCO60682 206 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 PSAPP07602 524 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 CYP3A4P08684 503 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 ZNF286BP0CG31 522 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 CYBAP13498 195 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 CPT1AP50416 773 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 CTTNQ14247 550 aaKnown RBP6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 CXCL17Q6UXB2 119 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 BANK1Q8NDB2 785 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 TNPO1Q92973 898 aaKnown RBP6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 FAM20AQ96MK3 541 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 SENP6Q9GZR1 1112 aaPredicted RBP6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 FAM13BQ9NYF5 915 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 GABBR1Q9UBS5 961 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 SMCHD1A6NHR9 2005 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 WNT7AO00755 349 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 NKRFO15226 690 aaKnown RBP eCLIP6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 TGFB3P10600 412 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 TCF7P36402 384 aaPredicted RBP6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 TOB1P50616 345 aaPredicted RBP6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 ACTR2P61160 394 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 KRT76Q01546 638 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 DGKDQ16760 1214 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 CELF3Q5SZQ8 465 aaKnown RBP6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 TAPT1Q6NXT6 567 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 MAEAQ7L5Y9 396 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 TRIM50Q86XT4 487 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 U2AF1L4Q8WU68 220 aaKnown RBP6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 GLT1D1Q96MS3 346 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 MAF1Q9H063 256 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 UNC45AQ9H3U1 944 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 LOC285556D6RIA3 1793 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 MYH6P13533 1939 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 KIAA0100Q14667 2235 aaKnown RBP6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 WDR64B1ANS9 1081 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 DUSP11O75319 330 aaKnown RBP6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 PRPF40AO75400 957 aaKnown RBP6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 PPP4R3AQ6IN85 833 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 METTL7BQ6UX53 244 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 CCDC73Q6ZRK6 1079 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 DOCK3Q8IZD9 2030 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 KRI1Q8N9T8 703 aaKnown RBP6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 TNFRSF25Q93038 417 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 DYDC2Q96IM9 177 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 SCAND2PQ9GZW5 306 aaPredicted RBP6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 ZNF302Q9NR11 478 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 RGL1Q9NZL6 768 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 CCDC39Q9UFE4 941 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 ZNF215Q9UL58 517 aaPredicted RBP6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 GINS2Q9Y248 185 aa6.52□□□□□ -1.37
HNRNPU-220ENST00000639667 LOC102724159A0A0B4J2E5 919 aa6.51□□□□□ -1.37
HNRNPU-220ENST00000639667 EDNRBP24530 442 aa6.51□□□□□ -1.37
HNRNPU-220ENST00000639667 STAT5BP51692 787 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms