RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 AFG1LQ8WV93 481 aa4.39□□□□□ -1.71
CCDC7-213ENST00000639290 THUMPD2Q9BTF0 503 aaKnown RBP4.39□□□□□ -1.71
CCDC7-213ENST00000639290 HYPKQ9NX55 129 aa4.39□□□□□ -1.71
CCDC7-213ENST00000639290 EPS15L1Q9UBC2 864 aa4.39□□□□□ -1.71
CCDC7-213ENST00000639290 DDX41Q9UJV9 622 aaKnown RBP4.39□□□□□ -1.71
CCDC7-213ENST00000639290 FRMPD2Q68DX3 1309 aaPredicted RBP4.39□□□□□ -1.71
CCDC7-213ENST00000639290 RALGAPA1Q6GYQ0 2036 aa4.38□□□□□ -1.71
CCDC7-213ENST00000639290 C2CD2LO14523 706 aa4.38□□□□□ -1.71
CCDC7-213ENST00000639290 HRO43593 1189 aa4.38□□□□□ -1.71
CCDC7-213ENST00000639290 GLULP15104 373 aa4.38□□□□□ -1.71
CCDC7-213ENST00000639290 RHBDL3P58872 404 aa4.38□□□□□ -1.71
CCDC7-213ENST00000639290 COG2Q14746 738 aa4.38□□□□□ -1.71
CCDC7-213ENST00000639290 SPECC1Q5M775 1068 aa4.38□□□□□ -1.71
CCDC7-213ENST00000639290 ATAT1Q5SQI0 421 aa4.38□□□□□ -1.71
CCDC7-213ENST00000639290 DMRTA1Q5VZB9 504 aa4.38□□□□□ -1.71
CCDC7-213ENST00000639290 LONP2Q86WA8 852 aa4.38□□□□□ -1.71
CCDC7-213ENST00000639290 CMTR2Q8IYT2 770 aaKnown RBP4.38□□□□□ -1.71
CCDC7-213ENST00000639290 CCDC97Q96F63 343 aaPredicted RBP4.38□□□□□ -1.71
CCDC7-213ENST00000639290 KIF2CQ99661 725 aa4.38□□□□□ -1.71
CCDC7-213ENST00000639290 LARP6Q9BRS8 491 aaKnown RBP4.38□□□□□ -1.71
CCDC7-213ENST00000639290 GZF1Q9H116 711 aaPredicted RBP4.38□□□□□ -1.71
CCDC7-213ENST00000639290 FZD8Q9H461 694 aa4.38□□□□□ -1.71
CCDC7-213ENST00000639290 KCNK12Q9HB15 430 aa4.38□□□□□ -1.71
CCDC7-213ENST00000639290 MKNK2Q9HBH9 465 aa4.38□□□□□ -1.71
CCDC7-213ENST00000639290 GOPCQ9HD26 462 aa4.38□□□□□ -1.71
CCDC7-213ENST00000639290 TRMT13Q9NUP7 481 aaKnown RBP4.38□□□□□ -1.71
CCDC7-213ENST00000639290 ZHX1Q9UKY1 873 aaPredicted RBP4.38□□□□□ -1.71
CCDC7-213ENST00000639290 NDUFB9Q9Y6M9 179 aa4.38□□□□□ -1.71
CCDC7-213ENST00000639290 FANCIQ9NVI1 1328 aa4.38□□□□□ -1.71
CCDC7-213ENST00000639290 SPTAN1Q13813 2472 aaKnown RBP4.38□□□□□ -1.71
CCDC7-213ENST00000639290 WDR46O15213 610 aaKnown RBP4.38□□□□□ -1.71
CCDC7-213ENST00000639290 PEX10O60683 326 aa4.38□□□□□ -1.71
CCDC7-213ENST00000639290 CSF1RP07333 972 aa4.38□□□□□ -1.71
CCDC7-213ENST00000639290 DMDP11532 3685 aa4.38□□□□□ -1.71
CCDC7-213ENST00000639290 CDK11BP21127 795 aaKnown RBP4.38□□□□□ -1.71
CCDC7-213ENST00000639290 FOSBP53539 338 aa4.38□□□□□ -1.71
CCDC7-213ENST00000639290 LY6DQ14210 128 aa4.38□□□□□ -1.71
CCDC7-213ENST00000639290 MFSD10Q14728 455 aa4.38□□□□□ -1.71
CCDC7-213ENST00000639290 CCDC144BQ3MJ40 725 aa4.38□□□□□ -1.71
CCDC7-213ENST00000639290 ZSCAN29Q8IWY8 852 aaPredicted RBP4.38□□□□□ -1.71
CCDC7-213ENST00000639290 VN1R2Q8NFZ6 395 aa4.38□□□□□ -1.71
CCDC7-213ENST00000639290 ADAMTS14Q8WXS8 1223 aa4.38□□□□□ -1.71
CCDC7-213ENST00000639290 LENG1Q96BZ8 264 aaPredicted RBP4.38□□□□□ -1.71
CCDC7-213ENST00000639290 MOCOSQ96EN8 888 aa4.38□□□□□ -1.71
CCDC7-213ENST00000639290 MED8Q96G25 268 aa4.38□□□□□ -1.71
CCDC7-213ENST00000639290 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.38□□□□□ -1.71
CCDC7-213ENST00000639290 ADAMTS5Q9UNA0 930 aa4.38□□□□□ -1.71
CCDC7-213ENST00000639290 MRPS17Q9Y2R5 130 aaKnown RBP4.38□□□□□ -1.71
CCDC7-213ENST00000639290 NBEAQ8NFP9 2946 aa4.37□□□□□ -1.71
CCDC7-213ENST00000639290 DNAJC25-GNG10A0A024R161 153 aa4.37□□□□□ -1.71
CCDC7-213ENST00000639290 DDTLA6NHG4 134 aaPredicted RBP4.37□□□□□ -1.71
CCDC7-213ENST00000639290 NBNO60934 754 aa4.37□□□□□ -1.71
CCDC7-213ENST00000639290 TOP3BO95985 862 aaKnown RBP4.37□□□□□ -1.71
CCDC7-213ENST00000639290 RAP1GAPP47736 663 aa4.37□□□□□ -1.71
CCDC7-213ENST00000639290 CPT1AP50416 773 aa4.37□□□□□ -1.71
CCDC7-213ENST00000639290 IQSEC1Q6DN90 963 aa4.37□□□□□ -1.71
CCDC7-213ENST00000639290 TLK2Q86UE8 772 aa4.37□□□□□ -1.71
CCDC7-213ENST00000639290 EDEM2Q9BV94 578 aa4.37□□□□□ -1.71
CCDC7-213ENST00000639290 ZNF768Q9H5H4 540 aaKnown RBP4.37□□□□□ -1.71
CCDC7-213ENST00000639290 GPCPD1Q9NPB8 672 aa4.37□□□□□ -1.71
CCDC7-213ENST00000639290 ASPMQ8IZT6 3477 aa4.37□□□□□ -1.71
CCDC7-213ENST00000639290 PIEZO2Q9H5I5 2752 aa4.37□□□□□ -1.71
CCDC7-213ENST00000639290 LOC102724159A0A0B4J2E5 919 aa4.37□□□□□ -1.71
CCDC7-213ENST00000639290 CCDC163A0A0D9SF12 145 aa4.37□□□□□ -1.71
CCDC7-213ENST00000639290 E9PSI1 815 aa4.37□□□□□ -1.71
CCDC7-213ENST00000639290 GIPC1O14908 333 aa4.37□□□□□ -1.71
CCDC7-213ENST00000639290 ITGA6P23229 1130 aa4.37□□□□□ -1.71
CCDC7-213ENST00000639290 PWP2Q15269 919 aaKnown RBP4.37□□□□□ -1.71
CCDC7-213ENST00000639290 PLEKHG4Q58EX7 1191 aa4.37□□□□□ -1.71
CCDC7-213ENST00000639290 BRDTQ58F21 947 aaPredicted RBP4.37□□□□□ -1.71
CCDC7-213ENST00000639290 FOXD4L5Q5VV16 416 aaPredicted RBP4.37□□□□□ -1.71
CCDC7-213ENST00000639290 PCSK4Q6UW60 755 aa4.37□□□□□ -1.71
CCDC7-213ENST00000639290 WDR5BQ86VZ2 330 aa4.37□□□□□ -1.71
CCDC7-213ENST00000639290 FAM160A2Q8N612 972 aaPredicted RBP4.37□□□□□ -1.71
CCDC7-213ENST00000639290 CMASQ8NFW8 434 aaPredicted RBP4.37□□□□□ -1.71
CCDC7-213ENST00000639290 FOXD4L4Q8WXT5 416 aaPredicted RBP4.37□□□□□ -1.71
CCDC7-213ENST00000639290 SEPT8Q92599 483 aa4.37□□□□□ -1.71
CCDC7-213ENST00000639290 KATNBL1Q9H079 304 aa4.37□□□□□ -1.71
CCDC7-213ENST00000639290 DHX36Q9H2U1 1008 aaKnown RBP4.37□□□□□ -1.71
CCDC7-213ENST00000639290 NGRNQ9NPE2 291 aaKnown RBP4.37□□□□□ -1.71
CCDC7-213ENST00000639290 ZFP37Q9Y6Q3 630 aaPredicted RBP4.37□□□□□ -1.71
CCDC7-213ENST00000639290 KIF26AQ9ULI4 1882 aaPredicted RBP4.37□□□□□ -1.71
CCDC7-213ENST00000639290 TRIOO75962 3097 aa4.37□□□□□ -1.71
CCDC7-213ENST00000639290 KIAA1217Q5T5P2 1943 aa4.36□□□□□ -1.71
CCDC7-213ENST00000639290 RAD50Q92878 1312 aa4.36□□□□□ -1.71
CCDC7-213ENST00000639290 ANKRD18BA2A2Z9 1011 aa4.36□□□□□ -1.71
CCDC7-213ENST00000639290 FAM155BO75949 473 aa4.36□□□□□ -1.71
CCDC7-213ENST00000639290 ITGB1P05556 798 aa4.36□□□□□ -1.71
CCDC7-213ENST00000639290 AIMP1Q12904 312 aaKnown RBP4.36□□□□□ -1.71
CCDC7-213ENST00000639290 PTK7Q13308 1070 aa4.36□□□□□ -1.71
CCDC7-213ENST00000639290 ZBTB41Q5SVQ8 909 aa4.36□□□□□ -1.71
CCDC7-213ENST00000639290 LRRC69Q6ZNQ3 347 aa4.36□□□□□ -1.71
CCDC7-213ENST00000639290 MCM10Q7L590 875 aa4.36□□□□□ -1.71
CCDC7-213ENST00000639290 TMCO2Q7Z6W1 182 aaPredicted RBP4.36□□□□□ -1.71
CCDC7-213ENST00000639290 CCDC84Q86UT8 332 aaPredicted RBP4.36□□□□□ -1.71
CCDC7-213ENST00000639290 NCAPG2Q86XI2 1143 aa4.36□□□□□ -1.71
CCDC7-213ENST00000639290 TET1Q8NFU7 2136 aa4.36□□□□□ -1.71
CCDC7-213ENST00000639290 ZDHHC16Q969W1 377 aa4.36□□□□□ -1.71
CCDC7-213ENST00000639290 ZNF689Q96CS4 500 aaPredicted RBP4.36□□□□□ -1.71
CCDC7-213ENST00000639290 ZNF594Q96JF6 807 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms