RNA–Protein interactions for RNA: ENST00000638903.1

PAX6-243, Transcript of paired box 6, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PAX6, Length 2,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-243ENST00000638903 USP17L1Q7RTZ2 530 aa12.78□□□□□ -0.36
PAX6-243ENST00000638903 RIC8AQ9NPQ8 531 aa12.78□□□□□ -0.36
PAX6-243ENST00000638903 PALM3A6NDB9 673 aaPredicted RBP12.77□□□□□ -0.36
PAX6-243ENST00000638903 SMCO2A6NFE2 343 aa12.77□□□□□ -0.36
PAX6-243ENST00000638903 CAMTA2O94983 1202 aa12.77□□□□□ -0.36
PAX6-243ENST00000638903 GOLGA8HP0CJ92 632 aa12.77□□□□□ -0.36
PAX6-243ENST00000638903 GNA11P29992 359 aa12.77□□□□□ -0.36
PAX6-243ENST00000638903 ECHS1P30084 290 aa12.77□□□□□ -0.36
PAX6-243ENST00000638903 CDR1P51861 262 aa12.77□□□□□ -0.36
PAX6-243ENST00000638903 LRRC41Q15345 812 aa12.77□□□□□ -0.36
PAX6-243ENST00000638903 PROM2Q8N271 834 aa12.77□□□□□ -0.36
PAX6-243ENST00000638903 GLIS3Q8NEA6 775 aa12.77□□□□□ -0.36
PAX6-243ENST00000638903 OR2W6PQ8NHA6 318 aa12.77□□□□□ -0.36
PAX6-243ENST00000638903 TBCKQ8TEA7 893 aa12.77□□□□□ -0.36
PAX6-243ENST00000638903 CNKSR2Q8WXI2 1034 aa12.77□□□□□ -0.36
PAX6-243ENST00000638903 TAF4BQ92750 862 aa12.77□□□□□ -0.36
PAX6-243ENST00000638903 DYNLL2Q96FJ2 89 aa12.77□□□□□ -0.36
PAX6-243ENST00000638903 CDK5RAP3Q96JB5 506 aa12.77□□□□□ -0.36
PAX6-243ENST00000638903 PNMA5Q96PV4 448 aa12.77□□□□□ -0.36
PAX6-243ENST00000638903 TACO1Q9BSH4 297 aaKnown RBP12.77□□□□□ -0.36
PAX6-243ENST00000638903 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.77□□□□□ -0.36
PAX6-243ENST00000638903 CPVLQ9H3G5 476 aa12.77□□□□□ -0.36
PAX6-243ENST00000638903 C6orf50Q9HD87 102 aa12.77□□□□□ -0.36
PAX6-243ENST00000638903 SLC40A1Q9NP59 571 aa12.77□□□□□ -0.36
PAX6-243ENST00000638903 ADAMTS1Q9UHI8 967 aa12.77□□□□□ -0.36
PAX6-243ENST00000638903 SLC12A6Q9UHW9 1150 aa12.77□□□□□ -0.36
PAX6-243ENST00000638903 MINPP1Q9UNW1 487 aa12.77□□□□□ -0.36
PAX6-243ENST00000638903 COL4A3BPQ9Y5P4 624 aa12.77□□□□□ -0.36
PAX6-243ENST00000638903 MYH7BA7E2Y1 1941 aa12.77□□□□□ -0.36
PAX6-243ENST00000638903 KLRF2D3W0D1 207 aa12.77□□□□□ -0.37
PAX6-243ENST00000638903 H0YGN5 161 aa12.77□□□□□ -0.37
PAX6-243ENST00000638903 KCNK3O14649 394 aa12.77□□□□□ -0.37
PAX6-243ENST00000638903 CTNNA1P35221 906 aaKnown RBP12.77□□□□□ -0.37
PAX6-243ENST00000638903 FKBP3Q00688 224 aaKnown RBP12.77□□□□□ -0.37
PAX6-243ENST00000638903 PPARDQ03181 441 aa12.77□□□□□ -0.37
PAX6-243ENST00000638903 ARID5AQ03989 594 aa12.77□□□□□ -0.37
PAX6-243ENST00000638903 CUL1Q13616 776 aa12.77□□□□□ -0.37
PAX6-243ENST00000638903 C12orf60Q5U649 245 aa12.77□□□□□ -0.37
PAX6-243ENST00000638903 INTS5Q6P9B9 1019 aaKnown RBP12.77□□□□□ -0.37
PAX6-243ENST00000638903 FBXO33Q7Z6M2 555 aa12.77□□□□□ -0.37
PAX6-243ENST00000638903 C3orf20Q8ND61 904 aa12.77□□□□□ -0.37
PAX6-243ENST00000638903 LRRC45Q96CN5 670 aa12.77□□□□□ -0.37
PAX6-243ENST00000638903 CCDC114Q96M63 670 aa12.77□□□□□ -0.37
PAX6-243ENST00000638903 LSM14BQ9BX40 385 aaKnown RBP12.77□□□□□ -0.37
PAX6-243ENST00000638903 PACSIN1Q9BY11 444 aa12.77□□□□□ -0.37
PAX6-243ENST00000638903 ACTR5Q9H9F9 607 aaPredicted RBP12.77□□□□□ -0.37
PAX6-243ENST00000638903 MKNK2Q9HBH9 465 aa12.77□□□□□ -0.37
PAX6-243ENST00000638903 BSDC1Q9NW68 430 aaPredicted RBP12.77□□□□□ -0.37
PAX6-243ENST00000638903 DDX20Q9UHI6 824 aaKnown RBP12.77□□□□□ -0.37
PAX6-243ENST00000638903 STX8Q9UNK0 236 aa12.77□□□□□ -0.37
PAX6-243ENST00000638903 NFS1Q9Y697 457 aa12.77□□□□□ -0.37
PAX6-243ENST00000638903 GOLGA6L7A0A1B0GV03 622 aa12.76□□□□□ -0.37
PAX6-243ENST00000638903 TRAPPC3O43617 180 aa12.76□□□□□ -0.37
PAX6-243ENST00000638903 TSPY3P0CV98 308 aa12.76□□□□□ -0.37
PAX6-243ENST00000638903 TSPY8P0CW00 308 aa12.76□□□□□ -0.37
PAX6-243ENST00000638903 ZNF844Q08AG5 666 aa12.76□□□□□ -0.37
PAX6-243ENST00000638903 RAPGEF1Q13905 1077 aa12.76□□□□□ -0.37
PAX6-243ENST00000638903 UAP1Q16222 522 aaPredicted RBP12.76□□□□□ -0.37
PAX6-243ENST00000638903 RUFY4Q6ZNE9 571 aa12.76□□□□□ -0.37
PAX6-243ENST00000638903 DDX12PQ92771 950 aa12.76□□□□□ -0.37
PAX6-243ENST00000638903 CCDC87Q9NVE4 849 aa12.76□□□□□ -0.37
PAX6-243ENST00000638903 ABCA3Q99758 1704 aa12.76□□□□□ -0.37
PAX6-243ENST00000638903 TRAF5O00463 557 aa12.76□□□□□ -0.37
PAX6-243ENST00000638903 CES2O00748 559 aa12.76□□□□□ -0.37
PAX6-243ENST00000638903 KLRK1P26718 216 aa12.76□□□□□ -0.37
PAX6-243ENST00000638903 KLHL30Q0D2K2 578 aa12.76□□□□□ -0.37
PAX6-243ENST00000638903 PSMD2Q13200 908 aa12.76□□□□□ -0.37
PAX6-243ENST00000638903 BIRC3Q13489 604 aa12.76□□□□□ -0.37
PAX6-243ENST00000638903 NEDD9Q14511 834 aa12.76□□□□□ -0.37
PAX6-243ENST00000638903 RPS6KA1Q15418 735 aa12.76□□□□□ -0.37
PAX6-243ENST00000638903 ENOX2Q16206 610 aaKnown RBP12.76□□□□□ -0.37
PAX6-243ENST00000638903 FOXR2Q6PJQ5 311 aa12.76□□□□□ -0.37
PAX6-243ENST00000638903 MYOCDQ8IZQ8 938 aa12.76□□□□□ -0.37
PAX6-243ENST00000638903 TMEM47Q9BQJ4 181 aa12.76□□□□□ -0.37
PAX6-243ENST00000638903 LZTS2Q9BRK4 669 aa12.76□□□□□ -0.37
PAX6-243ENST00000638903 OSBPL7Q9BZF2 842 aa12.76□□□□□ -0.37
PAX6-243ENST00000638903 ATAD5Q96QE3 1844 aa12.76□□□□□ -0.37
PAX6-243ENST00000638903 TMOD1P28289 359 aa12.75□□□□□ -0.37
PAX6-243ENST00000638903 NT5C2P49902 561 aa12.75□□□□□ -0.37
PAX6-243ENST00000638903 CALCRLQ16602 461 aa12.75□□□□□ -0.37
PAX6-243ENST00000638903 PREPLQ4J6C6 727 aaPredicted RBP12.75□□□□□ -0.37
PAX6-243ENST00000638903 ODF2Q5BJF6 829 aa12.75□□□□□ -0.37
PAX6-243ENST00000638903 DDX42Q86XP3 938 aaKnown RBP eCLIP12.75□□□□□ -0.37
PAX6-243ENST00000638903 FAM133AQ8N9E0 248 aa12.75□□□□□ -0.37
PAX6-243ENST00000638903 GIMAP7Q8NHV1 300 aa12.75□□□□□ -0.37
PAX6-243ENST00000638903 SCFD2Q8WU76 684 aa12.75□□□□□ -0.37
PAX6-243ENST00000638903 RAD54LQ92698 747 aa12.75□□□□□ -0.37
PAX6-243ENST00000638903 MTMR9Q96QG7 549 aa12.75□□□□□ -0.37
PAX6-243ENST00000638903 SPZ1Q9BXG8 430 aa12.75□□□□□ -0.37
PAX6-243ENST00000638903 AHDC1Q5TGY3 1603 aaPredicted RBP12.75□□□□□ -0.37
PAX6-243ENST00000638903 HOXA7P31268 230 aaPredicted RBP12.75□□□□□ -0.37
PAX6-243ENST00000638903 CRKLP46109 303 aaKnown RBP12.75□□□□□ -0.37
PAX6-243ENST00000638903 FXR2P51116 673 aaKnown RBP eCLIP12.75□□□□□ -0.37
PAX6-243ENST00000638903 ORC2Q13416 577 aaPredicted RBP12.75□□□□□ -0.37
PAX6-243ENST00000638903 QPCTQ16769 361 aa12.75□□□□□ -0.37
PAX6-243ENST00000638903 ZCWPW2Q504Y3 356 aa12.75□□□□□ -0.37
PAX6-243ENST00000638903 SOGA3Q5TF21 947 aa12.75□□□□□ -0.37
PAX6-243ENST00000638903 AIPL1Q9NZN9 384 aa12.75□□□□□ -0.37
PAX6-243ENST00000638903 BCCIPQ9P287 314 aaKnown RBP eCLIP12.75□□□□□ -0.37
PAX6-243ENST00000638903 BIN2Q9UBW5 565 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms