RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 RYBPQ8N488 228 aaPredicted RBP20.77■□□□□ 0.92
CACNA1A-257ENST00000638009 TERB1Q8NA31 727 aa20.77■□□□□ 0.92
CACNA1A-257ENST00000638009 BATF3Q9NR55 127 aa20.77■□□□□ 0.92
CACNA1A-257ENST00000638009 SYNGAP1Q96PV0 1343 aa20.77■□□□□ 0.92
CACNA1A-257ENST00000638009 TCP11X2Q5H9J9 407 aa20.77■□□□□ 0.92
CACNA1A-257ENST00000638009 RSPH1Q8WYR4 309 aa20.77■□□□□ 0.92
CACNA1A-257ENST00000638009 THAP11Q96EK4 314 aa20.77■□□□□ 0.92
CACNA1A-257ENST00000638009 ZFYVE19Q96K21 471 aa20.77■□□□□ 0.92
CACNA1A-257ENST00000638009 PKD2L1Q9P0L9 805 aa20.77■□□□□ 0.92
CACNA1A-257ENST00000638009 CDC23Q9UJX2 597 aa20.77■□□□□ 0.92
CACNA1A-257ENST00000638009 DIS3Q9Y2L1 958 aaKnown RBP20.77■□□□□ 0.92
CACNA1A-257ENST00000638009 ARIH2O95376 493 aa20.77■□□□□ 0.92
CACNA1A-257ENST00000638009 GEMIN8Q9NWZ8 242 aaKnown RBP20.77■□□□□ 0.92
CACNA1A-257ENST00000638009 SEL1LQ9UBV2 794 aa20.77■□□□□ 0.92
CACNA1A-257ENST00000638009 ATP8A1Q9Y2Q0 1164 aa20.77■□□□□ 0.92
CACNA1A-257ENST00000638009 KRT38O76015 456 aa20.77■□□□□ 0.92
CACNA1A-257ENST00000638009 ICE2Q659A1 982 aa20.77■□□□□ 0.92
CACNA1A-257ENST00000638009 CAPRIN2Q6IMN6 1127 aaKnown RBP20.77■□□□□ 0.92
CACNA1A-257ENST00000638009 TRIM63Q969Q1 353 aa20.77■□□□□ 0.92
CACNA1A-257ENST00000638009 CHPF2Q9P2E5 772 aa20.77■□□□□ 0.92
CACNA1A-257ENST00000638009 GLG1Q92896 1179 aa20.77■□□□□ 0.91
CACNA1A-257ENST00000638009 ZFP42Q96MM3 310 aa20.77■□□□□ 0.91
CACNA1A-257ENST00000638009 NLRC4Q9NPP4 1024 aa20.76■□□□□ 0.91
CACNA1A-257ENST00000638009 EIF4G3O43432 1585 aaKnown RBP20.76■□□□□ 0.91
CACNA1A-257ENST00000638009 TJP3O95049 919 aa20.76■□□□□ 0.91
CACNA1A-257ENST00000638009 HSPA4LO95757 839 aa20.76■□□□□ 0.91
CACNA1A-257ENST00000638009 ADALQ6DHV7 355 aa20.76■□□□□ 0.91
CACNA1A-257ENST00000638009 SIKE1Q9BRV8 207 aa20.76■□□□□ 0.91
CACNA1A-257ENST00000638009 GOLGA8FQ08AF8 430 aa20.76■□□□□ 0.91
CACNA1A-257ENST00000638009 GOLGA8DPQ0D2H9 430 aa20.76■□□□□ 0.91
CACNA1A-257ENST00000638009 NUGGCQ68CJ6 796 aa20.76■□□□□ 0.91
CACNA1A-257ENST00000638009 PANK4Q9NVE7 773 aa20.76■□□□□ 0.91
CACNA1A-257ENST00000638009 CYP2J2P51589 502 aa20.76■□□□□ 0.91
CACNA1A-257ENST00000638009 KRT72Q14CN4 511 aa20.76■□□□□ 0.91
CACNA1A-257ENST00000638009 RFX6Q8HWS3 928 aa20.76■□□□□ 0.91
CACNA1A-257ENST00000638009 AFAP1Q8N556 730 aa20.76■□□□□ 0.91
CACNA1A-257ENST00000638009 PYROXD1Q8WU10 500 aa20.76■□□□□ 0.91
CACNA1A-257ENST00000638009 MMTAG2Q9BU76 263 aaKnown RBP20.76■□□□□ 0.91
CACNA1A-257ENST00000638009 MAP3K13O43283 966 aa20.76■□□□□ 0.91
CACNA1A-257ENST00000638009 MAPK4P31152 587 aa20.76■□□□□ 0.91
CACNA1A-257ENST00000638009 CENPPQ6IPU0 288 aa20.76■□□□□ 0.91
CACNA1A-257ENST00000638009 UVRAGQ9P2Y5 699 aa20.76■□□□□ 0.91
CACNA1A-257ENST00000638009 NCOA1Q15788 1441 aa20.76■□□□□ 0.91
CACNA1A-257ENST00000638009 CFLARO15519 480 aa20.76■□□□□ 0.91
CACNA1A-257ENST00000638009 MYO1EQ12965 1108 aa20.76■□□□□ 0.91
CACNA1A-257ENST00000638009 GPBP1Q86WP2 473 aa20.76■□□□□ 0.91
CACNA1A-257ENST00000638009 TBC1D7Q9P0N9 293 aa20.76■□□□□ 0.91
CACNA1A-257ENST00000638009 CEP95Q96GE4 821 aa20.76■□□□□ 0.91
CACNA1A-257ENST00000638009 CYTH2Q99418 400 aa20.76■□□□□ 0.91
CACNA1A-257ENST00000638009 THUMPD2Q9BTF0 503 aaKnown RBP20.76■□□□□ 0.91
CACNA1A-257ENST00000638009 PITPNM3Q9BZ71 974 aa20.76■□□□□ 0.91
CACNA1A-257ENST00000638009 XPO4Q9C0E2 1151 aaKnown RBP20.76■□□□□ 0.91
CACNA1A-257ENST00000638009 RAB42Q8N4Z0 105 aa20.75■□□□□ 0.91
CACNA1A-257ENST00000638009 METTL23Q86XA0 190 aa20.75■□□□□ 0.91
CACNA1A-257ENST00000638009 TPH2Q8IWU9 490 aa20.75■□□□□ 0.91
CACNA1A-257ENST00000638009 GCOM2Q9BZD3 368 aaPredicted RBP20.75■□□□□ 0.91
CACNA1A-257ENST00000638009 ARHGEF3Q9NR81 526 aa20.75■□□□□ 0.91
CACNA1A-257ENST00000638009 LRRC8EQ6NSJ5 796 aa20.75■□□□□ 0.91
CACNA1A-257ENST00000638009 CAPN12Q6ZSI9 719 aa20.75■□□□□ 0.91
CACNA1A-257ENST00000638009 CABP7Q86V35 215 aa20.75■□□□□ 0.91
CACNA1A-257ENST00000638009 TTLL11Q8NHH1 800 aa20.75■□□□□ 0.91
CACNA1A-257ENST00000638009 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.75■□□□□ 0.91
CACNA1A-257ENST00000638009 PCDHA12Q9UN75 941 aa20.75■□□□□ 0.91
CACNA1A-257ENST00000638009 WDR7Q9Y4E6 1490 aa20.75■□□□□ 0.91
CACNA1A-257ENST00000638009 PMS2P54278 862 aa20.75■□□□□ 0.91
CACNA1A-257ENST00000638009 ADKP55263 362 aaKnown RBP20.75■□□□□ 0.91
CACNA1A-257ENST00000638009 HIBCHQ6NVY1 386 aaPredicted RBP20.75■□□□□ 0.91
CACNA1A-257ENST00000638009 BTBD6Q96KE9 485 aa20.75■□□□□ 0.91
CACNA1A-257ENST00000638009 TCEANC2Q96MN5 208 aa20.75■□□□□ 0.91
CACNA1A-257ENST00000638009 TFDP1Q14186 410 aa20.75■□□□□ 0.91
CACNA1A-257ENST00000638009 ABI1Q8IZP0 508 aa20.75■□□□□ 0.91
CACNA1A-257ENST00000638009 EFHBQ8N7U6 833 aa20.75■□□□□ 0.91
CACNA1A-257ENST00000638009 PPHLN1Q8NEY8 458 aaKnown RBP20.75■□□□□ 0.91
CACNA1A-257ENST00000638009 BTN2A2Q8WVV5 523 aa20.75■□□□□ 0.91
CACNA1A-257ENST00000638009 RBM17Q96I25 401 aaKnown RBP20.75■□□□□ 0.91
CACNA1A-257ENST00000638009 NHEJ1Q9H9Q4 299 aaPredicted RBP20.75■□□□□ 0.91
CACNA1A-257ENST00000638009 TRADDQ15628 312 aa20.75■□□□□ 0.91
CACNA1A-257ENST00000638009 CHST3Q7LGC8 479 aa20.75■□□□□ 0.91
CACNA1A-257ENST00000638009 C16orf62Q7Z3J2 963 aa20.74■□□□□ 0.91
CACNA1A-257ENST00000638009 TTC8Q8TAM2 541 aa20.74■□□□□ 0.91
CACNA1A-257ENST00000638009 RAPGEF5Q92565 580 aa20.74■□□□□ 0.91
CACNA1A-257ENST00000638009 TTC17Q96AE7 1141 aa20.74■□□□□ 0.91
CACNA1A-257ENST00000638009 ITGB1BP2Q9UKP3 347 aa20.74■□□□□ 0.91
CACNA1A-257ENST00000638009 RSPH10B2B2RC85 870 aa20.74■□□□□ 0.91
CACNA1A-257ENST00000638009 K7ENM7 598 aa20.74■□□□□ 0.91
CACNA1A-257ENST00000638009 RSPH10BP0C881 870 aa20.74■□□□□ 0.91
CACNA1A-257ENST00000638009 LSG1Q9H089 658 aaKnown RBP20.74■□□□□ 0.91
CACNA1A-257ENST00000638009 DPH5Q9H2P9 285 aa20.74■□□□□ 0.91
CACNA1A-257ENST00000638009 NIP7Q9Y221 180 aaKnown RBP eCLIP20.74■□□□□ 0.91
CACNA1A-257ENST00000638009 GRM1Q13255 1194 aa20.74■□□□□ 0.91
CACNA1A-257ENST00000638009 ARHGEF16Q5VV41 709 aa20.74■□□□□ 0.91
CACNA1A-257ENST00000638009 GUCA1CO95843 209 aa20.74■□□□□ 0.91
CACNA1A-257ENST00000638009 PPM1KQ8N3J5 372 aa20.74■□□□□ 0.91
CACNA1A-257ENST00000638009 PJA2O43164 708 aa20.74■□□□□ 0.91
CACNA1A-257ENST00000638009 NDUFA5Q16718 116 aa20.74■□□□□ 0.91
CACNA1A-257ENST00000638009 CNGB3Q9NQW8 809 aa20.74■□□□□ 0.91
CACNA1A-257ENST00000638009 POLGP54098 1239 aaPredicted RBP20.74■□□□□ 0.91
CACNA1A-257ENST00000638009 COPS2P61201 443 aa20.74■□□□□ 0.91
CACNA1A-257ENST00000638009 PCDHB4Q9Y5E5 795 aa20.74■□□□□ 0.91
CACNA1A-257ENST00000638009 SBNO2Q9Y2G9 1366 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms