RNA–Protein interactions for RNA: ENST00000637966.1

CACNA1A-255, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,887 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-255	ENST00000637966	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
CACNA1A-255	ENST00000637966	MAFG	O15525	162 aa		13.84	□□□□□ -0.19
CACNA1A-255	ENST00000637966	GAS7	O60861	476 aa		13.84	□□□□□ -0.19
CACNA1A-255	ENST00000637966	CLCN1	P35523	988 aa		13.84	□□□□□ -0.19
CACNA1A-255	ENST00000637966	CCT6A	P40227	531 aa	Known RBP	13.84	□□□□□ -0.19
CACNA1A-255	ENST00000637966	SARS	P49591	514 aa	Known RBP	13.84	□□□□□ -0.19
CACNA1A-255	ENST00000637966	DPCR1	Q3MIW9	517 aa		13.84	□□□□□ -0.19
CACNA1A-255	ENST00000637966	HYI	Q5T013	277 aa		13.84	□□□□□ -0.19
CACNA1A-255	ENST00000637966	NT5DC1	Q5TFE4	455 aa		13.84	□□□□□ -0.19
CACNA1A-255	ENST00000637966	NLRX1	Q86UT6	975 aa		13.84	□□□□□ -0.19
CACNA1A-255	ENST00000637966	ERMN	Q8TAM6	284 aa		13.84	□□□□□ -0.19
CACNA1A-255	ENST00000637966	LRRC15	Q8TF66	581 aa		13.84	□□□□□ -0.19
CACNA1A-255	ENST00000637966	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.84	□□□□□ -0.19
CACNA1A-255	ENST00000637966	DNAJC25-GNG10	A0A024R161	153 aa		13.83	□□□□□ -0.2
CACNA1A-255	ENST00000637966	EML1	O00423	815 aa		13.83	□□□□□ -0.2
CACNA1A-255	ENST00000637966	DHX15	O43143	795 aa	Known RBP	13.83	□□□□□ -0.2
CACNA1A-255	ENST00000637966	SMC2	O95347	1197 aa		13.83	□□□□□ -0.2
CACNA1A-255	ENST00000637966	ALDH5A1	P51649	535 aa	Predicted RBP	13.83	□□□□□ -0.2
CACNA1A-255	ENST00000637966	FSTL1	Q12841	308 aa		13.83	□□□□□ -0.2
CACNA1A-255	ENST00000637966	DPYD	Q12882	1025 aa		13.83	□□□□□ -0.2
CACNA1A-255	ENST00000637966	STXBP2	Q15833	593 aa		13.83	□□□□□ -0.2
CACNA1A-255	ENST00000637966	TMEM119	Q4V9L6	283 aa		13.83	□□□□□ -0.2
CACNA1A-255	ENST00000637966	SPATA20	Q8TB22	786 aa		13.83	□□□□□ -0.2
CACNA1A-255	ENST00000637966	SMARCE1	Q969G3	411 aa		13.83	□□□□□ -0.2
CACNA1A-255	ENST00000637966	GPRASP2	Q96D09	838 aa		13.83	□□□□□ -0.2
CACNA1A-255	ENST00000637966	INPP4A	Q96PE3	977 aa	Predicted RBP	13.83	□□□□□ -0.2
CACNA1A-255	ENST00000637966	TEKT3	Q9BXF9	490 aa		13.83	□□□□□ -0.2
CACNA1A-255	ENST00000637966	NT5C3A	Q9H0P0	336 aa		13.83	□□□□□ -0.2
CACNA1A-255	ENST00000637966	MAGEF1	Q9HAY2	307 aa		13.83	□□□□□ -0.2
CACNA1A-255	ENST00000637966	KBTBD4	Q9NVX7	518 aa		13.83	□□□□□ -0.2
CACNA1A-255	ENST00000637966	STK17A	Q9UEE5	414 aa		13.83	□□□□□ -0.2
CACNA1A-255	ENST00000637966	KDM3A	Q9Y4C1	1321 aa		13.83	□□□□□ -0.2
CACNA1A-255	ENST00000637966	BIN1	O00499	593 aa		13.82	□□□□□ -0.2
CACNA1A-255	ENST00000637966	GTPBP6	O43824	516 aa	Predicted RBP	13.82	□□□□□ -0.2
CACNA1A-255	ENST00000637966	EIF3J	O75822	258 aa	Known RBP	13.82	□□□□□ -0.2
CACNA1A-255	ENST00000637966	PGK2	P07205	417 aa		13.82	□□□□□ -0.2
CACNA1A-255	ENST00000637966	NLRP12	P59046	1061 aa		13.82	□□□□□ -0.2
CACNA1A-255	ENST00000637966	ECM1	Q16610	540 aa		13.82	□□□□□ -0.2
CACNA1A-255	ENST00000637966	HAUS3	Q68CZ6	603 aa		13.82	□□□□□ -0.2
CACNA1A-255	ENST00000637966	B3GNT9	Q6UX72	402 aa		13.82	□□□□□ -0.2
CACNA1A-255	ENST00000637966	IFNL1	Q8IU54	200 aa		13.82	□□□□□ -0.2
CACNA1A-255	ENST00000637966	TBC1D22B	Q9NU19	505 aa		13.82	□□□□□ -0.2
CACNA1A-255	ENST00000637966	BLOC1S4	Q9NUP1	217 aa		13.82	□□□□□ -0.2
CACNA1A-255	ENST00000637966	PKD2L1	Q9P0L9	805 aa		13.82	□□□□□ -0.2
CACNA1A-255	ENST00000637966	ZKSCAN5	Q9Y2L8	839 aa		13.82	□□□□□ -0.2
CACNA1A-255	ENST00000637966		B4DLN1	442 aa		13.82	□□□□□ -0.2
CACNA1A-255	ENST00000637966	MED24	O75448	989 aa		13.82	□□□□□ -0.2
CACNA1A-255	ENST00000637966	RGS20	O76081	388 aa		13.82	□□□□□ -0.2
CACNA1A-255	ENST00000637966	SPATA31C1	P0DKV0	1188 aa		13.82	□□□□□ -0.2
CACNA1A-255	ENST00000637966	RPA1	P27694	616 aa		13.82	□□□□□ -0.2
CACNA1A-255	ENST00000637966	CASP1	P29466	404 aa		13.82	□□□□□ -0.2
CACNA1A-255	ENST00000637966	ITGB3BP	Q13352	177 aa	Predicted RBP	13.82	□□□□□ -0.2
CACNA1A-255	ENST00000637966	FAM110C	Q1W6H9	321 aa		13.82	□□□□□ -0.2
CACNA1A-255	ENST00000637966	ISM2	Q6H9L7	571 aa		13.82	□□□□□ -0.2
CACNA1A-255	ENST00000637966	CATSPER3	Q86XQ3	398 aa		13.82	□□□□□ -0.2
CACNA1A-255	ENST00000637966	EIF2AK1	Q9BQI3	630 aa	Known RBP	13.82	□□□□□ -0.2
CACNA1A-255	ENST00000637966	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.82	□□□□□ -0.2
CACNA1A-255	ENST00000637966	UNC45A	Q9H3U1	944 aa		13.82	□□□□□ -0.2
CACNA1A-255	ENST00000637966	KIAA1024	Q9UPX6	916 aa		13.82	□□□□□ -0.2
CACNA1A-255	ENST00000637966	SPATA31C2	B4DYI2	1134 aa		13.81	□□□□□ -0.2
CACNA1A-255	ENST00000637966	STRN	O43815	780 aa		13.81	□□□□□ -0.2
CACNA1A-255	ENST00000637966	ATP9A	O75110	1047 aa		13.81	□□□□□ -0.2
CACNA1A-255	ENST00000637966	MYL1	P05976	194 aa		13.81	□□□□□ -0.2
CACNA1A-255	ENST00000637966	EDNRB	P24530	442 aa		13.81	□□□□□ -0.2
CACNA1A-255	ENST00000637966	PLCB2	Q00722	1185 aa		13.81	□□□□□ -0.2
CACNA1A-255	ENST00000637966	SREBF2	Q12772	1141 aa		13.81	□□□□□ -0.2
CACNA1A-255	ENST00000637966	SEMA3F	Q13275	785 aa		13.81	□□□□□ -0.2
CACNA1A-255	ENST00000637966	CUL4B	Q13620	913 aa		13.81	□□□□□ -0.2
CACNA1A-255	ENST00000637966	TAF1C	Q15572	869 aa	Predicted RBP	13.81	□□□□□ -0.2
CACNA1A-255	ENST00000637966	GNPTAB	Q3T906	1256 aa		13.81	□□□□□ -0.2
CACNA1A-255	ENST00000637966	SARM1	Q6SZW1	724 aa		13.81	□□□□□ -0.2
CACNA1A-255	ENST00000637966	SV2B	Q7L1I2	683 aa		13.81	□□□□□ -0.2
CACNA1A-255	ENST00000637966	KCNK18	Q7Z418	384 aa		13.81	□□□□□ -0.2
CACNA1A-255	ENST00000637966	RAD54L	Q92698	747 aa		13.81	□□□□□ -0.2
CACNA1A-255	ENST00000637966	CDHR1	Q96JP9	859 aa		13.81	□□□□□ -0.2
CACNA1A-255	ENST00000637966	GSDMA	Q96QA5	445 aa		13.81	□□□□□ -0.2
CACNA1A-255	ENST00000637966	MPHOSPH6	Q99547	160 aa	Known RBP	13.81	□□□□□ -0.2
CACNA1A-255	ENST00000637966	HSD17B14	Q9BPX1	270 aa		13.81	□□□□□ -0.2
CACNA1A-255	ENST00000637966	BPIFA3	Q9BQP9	254 aa		13.81	□□□□□ -0.2
CACNA1A-255	ENST00000637966	BLZF1	Q9H2G9	400 aa		13.81	□□□□□ -0.2
CACNA1A-255	ENST00000637966	MAN1B1	Q9UKM7	699 aa		13.81	□□□□□ -0.2
CACNA1A-255	ENST00000637966	ADGRA2	Q96PE1	1338 aa		13.81	□□□□□ -0.2
CACNA1A-255	ENST00000637966	KIAA1217	Q5T5P2	1943 aa		13.8	□□□□□ -0.2
CACNA1A-255	ENST00000637966	POTEB3	A0JP26	581 aa		13.8	□□□□□ -0.2
CACNA1A-255	ENST00000637966	CHMP2A	O43633	222 aa		13.8	□□□□□ -0.2
CACNA1A-255	ENST00000637966	TM4SF4	P48230	202 aa		13.8	□□□□□ -0.2
CACNA1A-255	ENST00000637966	ZNF75D	P51815	510 aa		13.8	□□□□□ -0.2
CACNA1A-255	ENST00000637966	AMPD3	Q01432	767 aa		13.8	□□□□□ -0.2
CACNA1A-255	ENST00000637966	PDE4D	Q08499	809 aa		13.8	□□□□□ -0.2
CACNA1A-255	ENST00000637966	MCM6	Q14566	821 aa		13.8	□□□□□ -0.2
CACNA1A-255	ENST00000637966	EPHA7	Q15375	998 aa		13.8	□□□□□ -0.2
CACNA1A-255	ENST00000637966	POTEB	Q6S5H4	581 aa		13.8	□□□□□ -0.2
CACNA1A-255	ENST00000637966	AOPEP	Q8N6M6	819 aa		13.8	□□□□□ -0.2
CACNA1A-255	ENST00000637966	TRIML1	Q8N9V2	468 aa		13.8	□□□□□ -0.2
CACNA1A-255	ENST00000637966	LARP4B	Q92615	738 aa	Known RBP	13.8	□□□□□ -0.2
CACNA1A-255	ENST00000637966	FGD4	Q96M96	766 aa		13.8	□□□□□ -0.2
CACNA1A-255	ENST00000637966	TUFT1	Q9NNX1	390 aa		13.8	□□□□□ -0.2
CACNA1A-255	ENST00000637966	CPA4	Q9UI42	421 aa		13.8	□□□□□ -0.2
CACNA1A-255	ENST00000637966	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
CACNA1A-255	ENST00000637966	DDX39A	O00148	427 aa	Known RBP	13.8	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms