RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 UBIAD1Q9Y5Z9 338 aa16.43■□□□□ 0.22
CACNA1A-249ENST00000637777 DTNBO60941 627 aa16.42■□□□□ 0.22
CACNA1A-249ENST00000637777 CD4P01730 458 aa16.42■□□□□ 0.22
CACNA1A-249ENST00000637777 LGALS2P05162 132 aa16.42■□□□□ 0.22
CACNA1A-249ENST00000637777 CYP2C9P11712 490 aa16.42■□□□□ 0.22
CACNA1A-249ENST00000637777 CYP2C18P33260 490 aa16.42■□□□□ 0.22
CACNA1A-249ENST00000637777 SREBF1P36956 1147 aa16.42■□□□□ 0.22
CACNA1A-249ENST00000637777 CLK2P49760 499 aaKnown RBP16.42■□□□□ 0.22
CACNA1A-249ENST00000637777 PPIGQ13427 754 aaKnown RBP eCLIP16.42■□□□□ 0.22
CACNA1A-249ENST00000637777 PTGISQ16647 500 aa16.42■□□□□ 0.22
CACNA1A-249ENST00000637777 CEP55Q53EZ4 464 aa16.42■□□□□ 0.22
CACNA1A-249ENST00000637777 SENP7Q9BQF6 1050 aa16.42■□□□□ 0.22
CACNA1A-249ENST00000637777 PRO3102Q9H379 93 aa16.42■□□□□ 0.22
CACNA1A-249ENST00000637777 BCAS3Q9H6U6 928 aa16.42■□□□□ 0.22
CACNA1A-249ENST00000637777 ZNF215Q9UL58 517 aaPredicted RBP16.42■□□□□ 0.22
CACNA1A-249ENST00000637777 RANBP2P49792 3224 aaKnown RBP16.42■□□□□ 0.22
CACNA1A-249ENST00000637777 DDX39AO00148 427 aaKnown RBP16.41■□□□□ 0.22
CACNA1A-249ENST00000637777 F2P00734 622 aa16.41■□□□□ 0.22
CACNA1A-249ENST00000637777 FOSBP53539 338 aa16.41■□□□□ 0.22
CACNA1A-249ENST00000637777 CCL23P55773 120 aa16.41■□□□□ 0.22
CACNA1A-249ENST00000637777 PTPN11Q06124 597 aaPredicted RBP16.41■□□□□ 0.22
CACNA1A-249ENST00000637777 ME3Q16798 604 aa16.41■□□□□ 0.22
CACNA1A-249ENST00000637777 MFSD5Q6N075 450 aa16.41■□□□□ 0.22
CACNA1A-249ENST00000637777 PLA2G4DQ86XP0 818 aa16.41■□□□□ 0.22
CACNA1A-249ENST00000637777 RETREG2Q8NC44 543 aa16.41■□□□□ 0.22
CACNA1A-249ENST00000637777 WASF1Q92558 559 aa16.41■□□□□ 0.22
CACNA1A-249ENST00000637777 KAT2BQ92831 832 aa16.41■□□□□ 0.22
CACNA1A-249ENST00000637777 AIFM3Q96NN9 605 aa16.41■□□□□ 0.22
CACNA1A-249ENST00000637777 GPR20Q99678 358 aa16.41■□□□□ 0.22
CACNA1A-249ENST00000637777 JPH1Q9HDC5 661 aaPredicted RBP16.41■□□□□ 0.22
CACNA1A-249ENST00000637777 KCNH7Q9NS40 1196 aa16.41■□□□□ 0.22
CACNA1A-249ENST00000637777 ORC3Q9UBD5 711 aaPredicted RBP16.41■□□□□ 0.22
CACNA1A-249ENST00000637777 PCDHA4Q9UN74 947 aa16.41■□□□□ 0.22
CACNA1A-249ENST00000637777 H3BRB1 525 aa16.4■□□□□ 0.22
CACNA1A-249ENST00000637777 MAFGO15525 162 aa16.4■□□□□ 0.22
CACNA1A-249ENST00000637777 ATP9AO75110 1047 aa16.4■□□□□ 0.22
CACNA1A-249ENST00000637777 LARGE1O95461 756 aa16.4■□□□□ 0.22
CACNA1A-249ENST00000637777 KCNA2P16389 499 aa16.4■□□□□ 0.22
CACNA1A-249ENST00000637777 TRIM50Q86XT4 487 aa16.4■□□□□ 0.22
CACNA1A-249ENST00000637777 CCDC155Q8N6L0 562 aa16.4■□□□□ 0.22
CACNA1A-249ENST00000637777 CYP2W1Q8TAV3 490 aa16.4■□□□□ 0.22
CACNA1A-249ENST00000637777 GLG1Q92896 1179 aa16.4■□□□□ 0.22
CACNA1A-249ENST00000637777 GTF3C6Q969F1 213 aa16.4■□□□□ 0.22
CACNA1A-249ENST00000637777 RNPC3Q96LT9 517 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-249ENST00000637777 UIMC1Q96RL1 719 aa16.4■□□□□ 0.22
CACNA1A-249ENST00000637777 NOC4LQ9BVI4 516 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-249ENST00000637777 TUT1Q9H6E5 874 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-249ENST00000637777 HDAC6Q9UBN7 1215 aa16.4■□□□□ 0.22
CACNA1A-249ENST00000637777 KCNJ14Q9UNX9 436 aa16.4■□□□□ 0.22
CACNA1A-249ENST00000637777 STK36Q9NRP7 1315 aa16.4■□□□□ 0.22
CACNA1A-249ENST00000637777 KAT6AQ92794 2004 aa16.4■□□□□ 0.22
CACNA1A-249ENST00000637777 ARP10275 920 aa16.39■□□□□ 0.21
CACNA1A-249ENST00000637777 CSF2RAP15509 400 aa16.39■□□□□ 0.21
CACNA1A-249ENST00000637777 TCF7P36402 384 aaPredicted RBP16.39■□□□□ 0.21
CACNA1A-249ENST00000637777 FXR1P51114 621 aaKnown RBP eCLIP16.39■□□□□ 0.21
CACNA1A-249ENST00000637777 SETQ01105 290 aaPredicted RBP16.39■□□□□ 0.21
CACNA1A-249ENST00000637777 BFSP2Q13515 415 aa16.39■□□□□ 0.21
CACNA1A-249ENST00000637777 TRIM29Q14134 588 aa16.39■□□□□ 0.21
CACNA1A-249ENST00000637777 GDF6Q6KF10 455 aaPredicted RBP16.39■□□□□ 0.21
CACNA1A-249ENST00000637777 BLIDQ8IZY5 108 aa16.39■□□□□ 0.21
CACNA1A-249ENST00000637777 IL17RAQ96F46 866 aa16.39■□□□□ 0.21
CACNA1A-249ENST00000637777 BRMS1Q9HCU9 246 aa16.39■□□□□ 0.21
CACNA1A-249ENST00000637777 SLC9A2Q9UBY0 812 aa16.39■□□□□ 0.21
CACNA1A-249ENST00000637777 LIMCH1Q9UPQ0 1083 aa16.39■□□□□ 0.21
CACNA1A-249ENST00000637777 UMODL1Q5DID0 1318 aa16.39■□□□□ 0.21
CACNA1A-249ENST00000637777 C17orf102A2RUQ5 167 aa16.38■□□□□ 0.21
CACNA1A-249ENST00000637777 ADAMTS3O15072 1205 aa16.38■□□□□ 0.21
CACNA1A-249ENST00000637777 ACRP10323 421 aa16.38■□□□□ 0.21
CACNA1A-249ENST00000637777 HOXD8P13378 290 aaPredicted RBP16.38■□□□□ 0.21
CACNA1A-249ENST00000637777 MARK3P27448 753 aa16.38■□□□□ 0.21
CACNA1A-249ENST00000637777 SHHQ15465 462 aa16.38■□□□□ 0.21
CACNA1A-249ENST00000637777 PRR16Q569H4 304 aa16.38■□□□□ 0.21
CACNA1A-249ENST00000637777 C9orf50Q5SZB4 431 aa16.38■□□□□ 0.21
CACNA1A-249ENST00000637777 CCDC83Q8IWF9 413 aa16.38■□□□□ 0.21
CACNA1A-249ENST00000637777 SEPT1Q8WYJ6 367 aa16.38■□□□□ 0.21
CACNA1A-249ENST00000637777 SCLYQ96I15 445 aa16.38■□□□□ 0.21
CACNA1A-249ENST00000637777 ZNF577Q9BSK1 485 aa16.38■□□□□ 0.21
CACNA1A-249ENST00000637777 AZI2Q9H6S1 392 aa16.38■□□□□ 0.21
CACNA1A-249ENST00000637777 AGO4Q9HCK5 861 aaKnown RBP16.38■□□□□ 0.21
CACNA1A-249ENST00000637777 GTF2IRD1Q9UHL9 959 aa16.38■□□□□ 0.21
CACNA1A-249ENST00000637777 GTF3C3Q9Y5Q9 886 aa16.38■□□□□ 0.21
CACNA1A-249ENST00000637777 TRIP12Q14669 1992 aaPredicted RBP16.37■□□□□ 0.21
CACNA1A-249ENST00000637777 CCDC194A0A1B0GVG4 234 aa16.37■□□□□ 0.21
CACNA1A-249ENST00000637777 FAM86B1E9PN63 330 aa16.37■□□□□ 0.21
CACNA1A-249ENST00000637777 ST18O60284 1047 aa16.37■□□□□ 0.21
CACNA1A-249ENST00000637777 FAM86B2P0C5J1 330 aa16.37■□□□□ 0.21
CACNA1A-249ENST00000637777 SMIM10L2AP0DMW4 78 aa16.37■□□□□ 0.21
CACNA1A-249ENST00000637777 SMIM10L2BP0DMW5 78 aa16.37■□□□□ 0.21
CACNA1A-249ENST00000637777 GALNT17Q6IS24 598 aa16.37■□□□□ 0.21
CACNA1A-249ENST00000637777 DEFB128Q7Z7B8 93 aa16.37■□□□□ 0.21
CACNA1A-249ENST00000637777 TBCKQ8TEA7 893 aa16.37■□□□□ 0.21
CACNA1A-249ENST00000637777 C16orf70Q9BSU1 422 aa16.37■□□□□ 0.21
CACNA1A-249ENST00000637777 TELO2Q9Y4R8 837 aa16.37■□□□□ 0.21
CACNA1A-249ENST00000637777 HAS3O00219 553 aa16.36■□□□□ 0.21
CACNA1A-249ENST00000637777 MEIS1O00470 390 aa16.36■□□□□ 0.21
CACNA1A-249ENST00000637777 BACH1O14867 736 aa16.36■□□□□ 0.21
CACNA1A-249ENST00000637777 CTDNEP1O95476 244 aa16.36■□□□□ 0.21
CACNA1A-249ENST00000637777 CYP3A4P08684 503 aa16.36■□□□□ 0.21
CACNA1A-249ENST00000637777 GNAT1P11488 350 aa16.36■□□□□ 0.21
CACNA1A-249ENST00000637777 EPHB4P54760 987 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms