RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 BANK1Q8NDB2 785 aa10.73□□□□□ -0.69
CACNA1A-248ENST00000637774 DYDC2Q96IM9 177 aa10.73□□□□□ -0.69
CACNA1A-248ENST00000637774 SEMA6BQ9H3T3 888 aa10.73□□□□□ -0.69
CACNA1A-248ENST00000637774 EMILIN3Q9NT22 766 aa10.73□□□□□ -0.69
CACNA1A-248ENST00000637774 PLIN4Q96Q06 1357 aa10.73□□□□□ -0.69
CACNA1A-248ENST00000637774 RSPH10B2B2RC85 870 aa10.73□□□□□ -0.69
CACNA1A-248ENST00000637774 NFIBO00712 420 aa10.73□□□□□ -0.69
CACNA1A-248ENST00000637774 NKRFO15226 690 aaKnown RBP eCLIP10.73□□□□□ -0.69
CACNA1A-248ENST00000637774 RSPH10BP0C881 870 aa10.73□□□□□ -0.69
CACNA1A-248ENST00000637774 ADAM9Q13443 819 aa10.73□□□□□ -0.69
CACNA1A-248ENST00000637774 SFR1Q86XK3 245 aa10.73□□□□□ -0.69
CACNA1A-248ENST00000637774 GMCL1P1Q8NEA9 526 aa10.73□□□□□ -0.69
CACNA1A-248ENST00000637774 CCDC42Q96M95 316 aa10.73□□□□□ -0.69
CACNA1A-248ENST00000637774 EPC1Q9H2F5 836 aa10.73□□□□□ -0.69
CACNA1A-248ENST00000637774 ABHD10Q9NUJ1 306 aa10.73□□□□□ -0.69
CACNA1A-248ENST00000637774 LIMA1Q9UHB6 759 aaKnown RBP10.73□□□□□ -0.69
CACNA1A-248ENST00000637774 LGALS16A8MUM7 142 aa10.73□□□□□ -0.69
CACNA1A-248ENST00000637774 HMGCS2P54868 508 aa10.73□□□□□ -0.69
CACNA1A-248ENST00000637774 TRAF1Q13077 416 aa10.73□□□□□ -0.69
CACNA1A-248ENST00000637774 SPA17Q15506 151 aa10.73□□□□□ -0.69
CACNA1A-248ENST00000637774 CT47A1Q5JQC4 288 aaPredicted RBP10.73□□□□□ -0.69
CACNA1A-248ENST00000637774 NYAP1Q6ZVC0 841 aa10.73□□□□□ -0.69
CACNA1A-248ENST00000637774 IRF2BP1Q8IU81 584 aa10.73□□□□□ -0.69
CACNA1A-248ENST00000637774 TMTC1Q8IUR5 882 aa10.73□□□□□ -0.69
CACNA1A-248ENST00000637774 KSR1Q8IVT5 923 aa10.73□□□□□ -0.69
CACNA1A-248ENST00000637774 ANKRD13CQ8N6S4 541 aa10.73□□□□□ -0.69
CACNA1A-248ENST00000637774 PURBQ96QR8 312 aaKnown RBP10.73□□□□□ -0.69
CACNA1A-248ENST00000637774 DUSP9Q99956 384 aaKnown RBP10.73□□□□□ -0.69
CACNA1A-248ENST00000637774 EIF2AK1Q9BQI3 630 aaKnown RBP10.73□□□□□ -0.69
CACNA1A-248ENST00000637774 THAP9Q9H5L6 903 aa10.73□□□□□ -0.69
CACNA1A-248ENST00000637774 CCDC122Q5T0U0 273 aa10.72□□□□□ -0.69
CACNA1A-248ENST00000637774 NEK11Q8NG66 645 aa10.72□□□□□ -0.69
CACNA1A-248ENST00000637774 FGFBP2Q9BYJ0 223 aa10.72□□□□□ -0.69
CACNA1A-248ENST00000637774 NDST4Q9H3R1 872 aa10.72□□□□□ -0.69
CACNA1A-248ENST00000637774 BCAS3Q9H6U6 928 aa10.72□□□□□ -0.69
CACNA1A-248ENST00000637774 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.72□□□□□ -0.69
CACNA1A-248ENST00000637774 EPN1Q9Y6I3 576 aaPredicted RBP10.72□□□□□ -0.69
CACNA1A-248ENST00000637774 EML1O00423 815 aa10.72□□□□□ -0.69
CACNA1A-248ENST00000637774 ENC1O14682 589 aa10.72□□□□□ -0.69
CACNA1A-248ENST00000637774 EDIL3O43854 480 aa10.72□□□□□ -0.69
CACNA1A-248ENST00000637774 ARP10275 920 aa10.72□□□□□ -0.69
CACNA1A-248ENST00000637774 NR2F2P24468 414 aa10.72□□□□□ -0.69
CACNA1A-248ENST00000637774 PSMB7Q99436 277 aa10.72□□□□□ -0.69
CACNA1A-248ENST00000637774 MTFR1LQ9H019 292 aa10.72□□□□□ -0.69
CACNA1A-248ENST00000637774 NAV1Q8NEY1 1877 aa10.72□□□□□ -0.69
CACNA1A-248ENST00000637774 ARHGEF35A5YM69 484 aa10.71□□□□□ -0.69
CACNA1A-248ENST00000637774 GOLGA6L9A6NEM1 432 aa10.71□□□□□ -0.69
CACNA1A-248ENST00000637774 CETN3O15182 167 aa10.71□□□□□ -0.69
CACNA1A-248ENST00000637774 KIF20AO95235 890 aa10.71□□□□□ -0.69
CACNA1A-248ENST00000637774 NOVP48745 357 aa10.71□□□□□ -0.69
CACNA1A-248ENST00000637774 PRPF38AQ8NAV1 312 aaKnown RBP10.71□□□□□ -0.69
CACNA1A-248ENST00000637774 NLGN2Q8NFZ4 835 aa10.71□□□□□ -0.69
CACNA1A-248ENST00000637774 CAPZA3Q96KX2 299 aa10.71□□□□□ -0.69
CACNA1A-248ENST00000637774 RPAP3Q9H6T3 665 aaPredicted RBP10.71□□□□□ -0.69
CACNA1A-248ENST00000637774 TRIM10Q9UDY6 481 aa10.71□□□□□ -0.69
CACNA1A-248ENST00000637774 PVALEFA0A1B0GWK0 134 aa10.71□□□□□ -0.69
CACNA1A-248ENST00000637774 NFKBIEO00221 500 aa10.71□□□□□ -0.69
CACNA1A-248ENST00000637774 ZBED4O75132 1171 aa10.71□□□□□ -0.69
CACNA1A-248ENST00000637774 CYP11B2P19099 503 aa10.71□□□□□ -0.69
CACNA1A-248ENST00000637774 CLK2P49760 499 aaKnown RBP10.71□□□□□ -0.69
CACNA1A-248ENST00000637774 FKBP3Q00688 224 aaKnown RBP10.71□□□□□ -0.69
CACNA1A-248ENST00000637774 RAPGEF1Q13905 1077 aa10.71□□□□□ -0.69
CACNA1A-248ENST00000637774 CEP55Q53EZ4 464 aa10.71□□□□□ -0.69
CACNA1A-248ENST00000637774 UTP14CQ5TAP6 766 aaKnown RBP10.71□□□□□ -0.69
CACNA1A-248ENST00000637774 MIER3Q7Z3K6 550 aa10.71□□□□□ -0.69
CACNA1A-248ENST00000637774 REXO1L1PQ8IX06 675 aa10.71□□□□□ -0.69
CACNA1A-248ENST00000637774 CAGE1Q8TC20 777 aa10.71□□□□□ -0.69
CACNA1A-248ENST00000637774 GMLQ99445 158 aa10.71□□□□□ -0.69
CACNA1A-248ENST00000637774 GGA3Q9NZ52 723 aa10.71□□□□□ -0.69
CACNA1A-248ENST00000637774 ADGRG1Q9Y653 693 aa10.71□□□□□ -0.69
CACNA1A-248ENST00000637774 ZNF831Q5JPB2 1677 aa10.71□□□□□ -0.7
CACNA1A-248ENST00000637774 IPO5O00410 1097 aaKnown RBP10.71□□□□□ -0.7
CACNA1A-248ENST00000637774 TGFB2P61812 414 aa10.71□□□□□ -0.7
CACNA1A-248ENST00000637774 TBX2Q13207 712 aaPredicted RBP10.71□□□□□ -0.7
CACNA1A-248ENST00000637774 ARHGEF16Q5VV41 709 aa10.71□□□□□ -0.7
CACNA1A-248ENST00000637774 APTXQ7Z2E3 356 aaKnown RBP10.71□□□□□ -0.7
CACNA1A-248ENST00000637774 FAM160B2Q86V87 743 aa10.71□□□□□ -0.7
CACNA1A-248ENST00000637774 LRRN4CLQ8ND94 238 aa10.71□□□□□ -0.7
CACNA1A-248ENST00000637774 PANX2Q96RD6 677 aa10.71□□□□□ -0.7
CACNA1A-248ENST00000637774 REEP2Q9BRK0 252 aa10.71□□□□□ -0.7
CACNA1A-248ENST00000637774 SEPT11Q9NVA2 429 aaKnown RBP10.71□□□□□ -0.7
CACNA1A-248ENST00000637774 FEM1BQ9UK73 627 aa10.71□□□□□ -0.7
CACNA1A-248ENST00000637774 ZHX1Q9UKY1 873 aaPredicted RBP10.71□□□□□ -0.7
CACNA1A-248ENST00000637774 CYLC1P35663 651 aaPredicted RBP10.7□□□□□ -0.7
CACNA1A-248ENST00000637774 SREBF1P36956 1147 aa10.7□□□□□ -0.7
CACNA1A-248ENST00000637774 CYP2J2P51589 502 aa10.7□□□□□ -0.7
CACNA1A-248ENST00000637774 ERVK-24P63145 666 aa10.7□□□□□ -0.7
CACNA1A-248ENST00000637774 ORC2Q13416 577 aaPredicted RBP10.7□□□□□ -0.7
CACNA1A-248ENST00000637774 GRIPAP1Q4V328 841 aa10.7□□□□□ -0.7
CACNA1A-248ENST00000637774 KRT26Q7Z3Y9 468 aa10.7□□□□□ -0.7
CACNA1A-248ENST00000637774 SLC35F6Q8N357 371 aa10.7□□□□□ -0.7
CACNA1A-248ENST00000637774 GUF1Q8N442 669 aaKnown RBP10.7□□□□□ -0.7
CACNA1A-248ENST00000637774 ATG4CQ96DT6 458 aa10.7□□□□□ -0.7
CACNA1A-248ENST00000637774 SPAG5Q96R06 1193 aa10.7□□□□□ -0.7
CACNA1A-248ENST00000637774 HINFPQ9BQA5 517 aa10.7□□□□□ -0.7
CACNA1A-248ENST00000637774 USO1O60763 962 aaKnown RBP10.7□□□□□ -0.7
CACNA1A-248ENST00000637774 ABL1P00519 1130 aa10.7□□□□□ -0.7
CACNA1A-248ENST00000637774 POLR2FP61218 127 aaKnown RBP10.7□□□□□ -0.7
CACNA1A-248ENST00000637774 APBA1Q02410 837 aa10.7□□□□□ -0.7
CACNA1A-248ENST00000637774 NCBP1Q09161 790 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms