RNA–Protein interactions for RNA: ENST00000636705.1

CLN5-214, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-214ENST00000636705 DGKGP49619 791 aa4.57□□□□□ -1.68
CLN5-214ENST00000636705 CAMK2GQ13555 558 aaPredicted RBP4.57□□□□□ -1.68
CLN5-214ENST00000636705 PPP2R5EQ16537 467 aa4.57□□□□□ -1.68
CLN5-214ENST00000636705 FXNQ16595 210 aa4.57□□□□□ -1.68
CLN5-214ENST00000636705 TMEM67Q5HYA8 995 aa4.57□□□□□ -1.68
CLN5-214ENST00000636705 ARMC3Q5W041 872 aa4.57□□□□□ -1.68
CLN5-214ENST00000636705 LVRNQ6Q4G3 990 aa4.57□□□□□ -1.68
CLN5-214ENST00000636705 ZBTB46Q86UZ6 589 aa4.57□□□□□ -1.68
CLN5-214ENST00000636705 TXNRD3Q86VQ6 643 aa4.57□□□□□ -1.68
CLN5-214ENST00000636705 CCDC89Q8N998 374 aa4.57□□□□□ -1.68
CLN5-214ENST00000636705 KIFC2Q96AC6 838 aa4.57□□□□□ -1.68
CLN5-214ENST00000636705 CHMP4CQ96CF2 233 aa4.57□□□□□ -1.68
CLN5-214ENST00000636705 STRBPQ96SI9 672 aaKnown RBP4.57□□□□□ -1.68
CLN5-214ENST00000636705 GDF15Q99988 308 aa4.57□□□□□ -1.68
CLN5-214ENST00000636705 IRX2Q9BZI1 471 aaPredicted RBP4.57□□□□□ -1.68
CLN5-214ENST00000636705 UBE2OQ9C0C9 1292 aaKnown RBP4.57□□□□□ -1.68
CLN5-214ENST00000636705 SLC5A4Q9NY91 659 aa4.57□□□□□ -1.68
CLN5-214ENST00000636705 ZNF69Q9UC07 566 aa4.57□□□□□ -1.68
CLN5-214ENST00000636705 PCDHGB3Q9Y5G1 929 aa4.57□□□□□ -1.68
CLN5-214ENST00000636705 SNCAIPQ9Y6H5 919 aa4.57□□□□□ -1.68
CLN5-214ENST00000636705 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.57□□□□□ -1.68
CLN5-214ENST00000636705 RBBP6Q7Z6E9 1792 aaKnown RBP4.57□□□□□ -1.68
CLN5-214ENST00000636705 TMEM265A0A087WTH1 108 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 TTC24A2A3L6 582 aaPredicted RBP4.56□□□□□ -1.68
CLN5-214ENST00000636705 GOLGA6CA6NDK9 693 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 GOLGA6BA6NDN3 693 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 PRRT4C9JH25 899 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 CTNND1O60716 968 aaKnown RBP4.56□□□□□ -1.68
CLN5-214ENST00000636705 HIP1RO75146 1068 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 GADD45BO75293 160 aaPredicted RBP4.56□□□□□ -1.68
CLN5-214ENST00000636705 DGAT1O75907 488 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 PTMAP06454 111 aaKnown RBP4.56□□□□□ -1.68
CLN5-214ENST00000636705 CELA3AP09093 270 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 GOLGA6DP0CG33 693 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 PICALMQ13492 652 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 MTFR1Q15390 333 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 WWC2Q6AWC2 1192 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 CNNM4Q6P4Q7 775 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 LRRTM3Q86VH5 581 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 LSRQ86X29 649 aaPredicted RBP4.56□□□□□ -1.68
CLN5-214ENST00000636705 CLASRPQ8N2M8 674 aaKnown RBP4.56□□□□□ -1.68
CLN5-214ENST00000636705 CERS5Q8N5B7 392 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 ENAHQ8N8S7 591 aaPredicted RBP4.56□□□□□ -1.68
CLN5-214ENST00000636705 ZSWIM2Q8NEG5 633 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 C11orf49Q9H6J7 331 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 PAK6Q9NQU5 681 aaPredicted RBP4.56□□□□□ -1.68
CLN5-214ENST00000636705 GOLGA6AQ9NYA3 693 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 IP6K2Q9UHH9 426 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 CPA4Q9UI42 421 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 SCAF8Q9UPN6 1271 aaKnown RBP4.56□□□□□ -1.68
CLN5-214ENST00000636705 LRRFIP2Q9Y608 721 aaKnown RBP4.56□□□□□ -1.68
CLN5-214ENST00000636705 MORC2Q9Y6X9 1032 aaPredicted RBP4.56□□□□□ -1.68
CLN5-214ENST00000636705 DHX16O60231 1041 aaKnown RBP4.56□□□□□ -1.68
CLN5-214ENST00000636705 GFRA3O60609 400 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 ENTPD3O75355 529 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 AGR2O95994 175 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 BCRP11274 1271 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 GSTT1P30711 240 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 PDE3AQ14432 1141 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 TRIP4Q15650 581 aaPredicted RBP4.56□□□□□ -1.68
CLN5-214ENST00000636705 FAM110CQ1W6H9 321 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 KRT24Q2M2I5 525 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 TWISTNBQ3B726 338 aaPredicted RBP4.56□□□□□ -1.68
CLN5-214ENST00000636705 ALDH1L2Q3SY69 923 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 TUBB8Q3ZCM7 444 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 SNAP47Q5SQN1 464 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 XRRA1Q6P2D8 792 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 BNC2Q6ZN30 1099 aaPredicted RBP4.56□□□□□ -1.68
CLN5-214ENST00000636705 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.56□□□□□ -1.68
CLN5-214ENST00000636705 SMAP1Q8IYB5 467 aaPredicted RBP4.56□□□□□ -1.68
CLN5-214ENST00000636705 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.56□□□□□ -1.68
CLN5-214ENST00000636705 LEO1Q8WVC0 666 aaPredicted RBP4.56□□□□□ -1.68
CLN5-214ENST00000636705 SOCS4Q8WXH5 440 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 SHISA4Q96DD7 197 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 DEFB118Q96PH6 123 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 TMEM39BQ9GZU3 492 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 CNNM2Q9H8M5 875 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 TMEM63CQ9P1W3 806 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 EVLQ9UI08 416 aaPredicted RBP4.56□□□□□ -1.68
CLN5-214ENST00000636705 GTF2A1LQ9UNN4 478 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 MAPRE3Q9UPY8 281 aa4.56□□□□□ -1.68
CLN5-214ENST00000636705 ELL2O00472 640 aaPredicted RBP4.55□□□□□ -1.68
CLN5-214ENST00000636705 RHOBTB3O94955 611 aa4.55□□□□□ -1.68
CLN5-214ENST00000636705 FLT3LGP49771 235 aa4.55□□□□□ -1.68
CLN5-214ENST00000636705 RENBPP51606 427 aa4.55□□□□□ -1.68
CLN5-214ENST00000636705 PRKCZQ05513 592 aa4.55□□□□□ -1.68
CLN5-214ENST00000636705 NR5A1Q13285 461 aa4.55□□□□□ -1.68
CLN5-214ENST00000636705 GRM3Q14832 879 aa4.55□□□□□ -1.68
CLN5-214ENST00000636705 COBLL1Q53SF7 1204 aa4.55□□□□□ -1.68
CLN5-214ENST00000636705 INTS6LQ5JSJ4 861 aaKnown RBP4.55□□□□□ -1.68
CLN5-214ENST00000636705 PDXDC1Q6P996 788 aa4.55□□□□□ -1.68
CLN5-214ENST00000636705 C16orf54Q6UWD8 224 aa4.55□□□□□ -1.68
CLN5-214ENST00000636705 PASD1Q8IV76 773 aa4.55□□□□□ -1.68
CLN5-214ENST00000636705 SCYL3Q8IZE3 742 aa4.55□□□□□ -1.68
CLN5-214ENST00000636705 SKA1Q96BD8 255 aa4.55□□□□□ -1.68
CLN5-214ENST00000636705 FAM84BQ96KN1 310 aaPredicted RBP4.55□□□□□ -1.68
CLN5-214ENST00000636705 EXOC2Q96KP1 924 aa4.55□□□□□ -1.68
CLN5-214ENST00000636705 FERD3LQ96RJ6 166 aa4.55□□□□□ -1.68
CLN5-214ENST00000636705 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.55□□□□□ -1.68
CLN5-214ENST00000636705 NCOA5Q9HCD5 579 aaKnown RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms