RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 PDXDC1Q6P996 788 aa15.49■□□□□ 0.07
CACNA1A-228ENST00000636610 CCDC84Q86UT8 332 aaPredicted RBP15.49■□□□□ 0.07
CACNA1A-228ENST00000636610 HYOU1Q9Y4L1 999 aa15.49■□□□□ 0.07
CACNA1A-228ENST00000636610 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.49■□□□□ 0.07
CACNA1A-228ENST00000636610 NOP2P46087 812 aaKnown RBP15.49■□□□□ 0.07
CACNA1A-228ENST00000636610 TUBB4BP68371 445 aa15.49■□□□□ 0.07
CACNA1A-228ENST00000636610 KLHDC7AQ5VTJ3 777 aa15.49■□□□□ 0.07
CACNA1A-228ENST00000636610 HAUS3Q68CZ6 603 aa15.49■□□□□ 0.07
CACNA1A-228ENST00000636610 GUF1Q8N442 669 aaKnown RBP15.49■□□□□ 0.07
CACNA1A-228ENST00000636610 PURBQ96QR8 312 aaKnown RBP15.49■□□□□ 0.07
CACNA1A-228ENST00000636610 RUFY1Q96T51 708 aa15.49■□□□□ 0.07
CACNA1A-228ENST00000636610 RAB34Q9BZG1 259 aa15.49■□□□□ 0.07
CACNA1A-228ENST00000636610 FAM107BQ9H098 131 aa15.49■□□□□ 0.07
CACNA1A-228ENST00000636610 KCNQ5Q9NR82 932 aa15.49■□□□□ 0.07
CACNA1A-228ENST00000636610 COL4A3BPQ9Y5P4 624 aa15.49■□□□□ 0.07
CACNA1A-228ENST00000636610 CNTNAP4Q9C0A0 1308 aa15.49■□□□□ 0.07
CACNA1A-228ENST00000636610 ANO9A1A5B4 782 aa15.48■□□□□ 0.07
CACNA1A-228ENST00000636610 SFMBT2Q5VUG0 894 aa15.48■□□□□ 0.07
CACNA1A-228ENST00000636610 HGSNATQ68CP4 663 aa15.48■□□□□ 0.07
CACNA1A-228ENST00000636610 NOX5Q96PH1 765 aa15.48■□□□□ 0.07
CACNA1A-228ENST00000636610 TSGA10Q9BZW7 698 aa15.48■□□□□ 0.07
CACNA1A-228ENST00000636610 RIOX1Q9H6W3 641 aa15.48■□□□□ 0.07
CACNA1A-228ENST00000636610 USP40Q9NVE5 1235 aa15.48■□□□□ 0.07
CACNA1A-228ENST00000636610 FAM184BQ9ULE4 1060 aa15.48■□□□□ 0.07
CACNA1A-228ENST00000636610 CASZ1Q86V15 1759 aa15.48■□□□□ 0.07
CACNA1A-228ENST00000636610 NOL4O94818 638 aa15.48■□□□□ 0.07
CACNA1A-228ENST00000636610 SLC9A1P19634 815 aa15.48■□□□□ 0.07
CACNA1A-228ENST00000636610 COL16A1Q07092 1604 aaPredicted RBP15.48■□□□□ 0.07
CACNA1A-228ENST00000636610 ADAM9Q13443 819 aa15.48■□□□□ 0.07
CACNA1A-228ENST00000636610 DNAJC19Q96DA6 116 aa15.48■□□□□ 0.07
CACNA1A-228ENST00000636610 CLIC2O15247 247 aa15.47■□□□□ 0.07
CACNA1A-228ENST00000636610 RBM5P52756 815 aaKnown RBP eCLIP15.47■□□□□ 0.07
CACNA1A-228ENST00000636610 FKBP3Q00688 224 aaKnown RBP15.47■□□□□ 0.07
CACNA1A-228ENST00000636610 KLHL30Q0D2K2 578 aa15.47■□□□□ 0.07
CACNA1A-228ENST00000636610 PDCLQ13371 301 aa15.47■□□□□ 0.07
CACNA1A-228ENST00000636610 PRR16Q569H4 304 aa15.47■□□□□ 0.07
CACNA1A-228ENST00000636610 GJB7Q6PEY0 223 aa15.47■□□□□ 0.07
CACNA1A-228ENST00000636610 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.47■□□□□ 0.07
CACNA1A-228ENST00000636610 LRRC4BQ9NT99 713 aa15.47■□□□□ 0.07
CACNA1A-228ENST00000636610 KIAA1551Q9HCM1 1747 aa15.47■□□□□ 0.07
CACNA1A-228ENST00000636610 TMCO5BA8MYB1 307 aa15.47■□□□□ 0.07
CACNA1A-228ENST00000636610 PLA2G4BP0C869 781 aa15.47■□□□□ 0.07
CACNA1A-228ENST00000636610 GNGT1P63211 74 aa15.47■□□□□ 0.07
CACNA1A-228ENST00000636610 SF3A3Q12874 501 aaKnown RBP eCLIP15.47■□□□□ 0.07
CACNA1A-228ENST00000636610 SLC9C1Q4G0N8 1177 aa15.47■□□□□ 0.07
CACNA1A-228ENST00000636610 IQCEQ6IPM2 695 aa15.47■□□□□ 0.07
CACNA1A-228ENST00000636610 TBC1D16Q8TBP0 767 aa15.47■□□□□ 0.07
CACNA1A-228ENST00000636610 AENQ8WTP8 325 aaKnown RBP15.47■□□□□ 0.07
CACNA1A-228ENST00000636610 MAGEF1Q9HAY2 307 aa15.47■□□□□ 0.07
CACNA1A-228ENST00000636610 BMP2KQ9NSY1 1161 aaPredicted RBP15.47■□□□□ 0.07
CACNA1A-228ENST00000636610 STIM2Q9P246 746 aa15.47■□□□□ 0.07
CACNA1A-228ENST00000636610 A0A1W2PQJ5 194 aa15.46■□□□□ 0.07
CACNA1A-228ENST00000636610 HEXIM1O94992 359 aaKnown RBP15.46■□□□□ 0.07
CACNA1A-228ENST00000636610 KCNA1Q09470 495 aa15.46■□□□□ 0.07
CACNA1A-228ENST00000636610 PLCD3Q8N3E9 789 aa15.46■□□□□ 0.07
CACNA1A-228ENST00000636610 CCDC43Q96MW1 224 aaKnown RBP15.46■□□□□ 0.07
CACNA1A-228ENST00000636610 AP1M1Q9BXS5 423 aa15.46■□□□□ 0.07
CACNA1A-228ENST00000636610 STK17AQ9UEE5 414 aa15.46■□□□□ 0.07
CACNA1A-228ENST00000636610 PCDHA1Q9Y5I3 950 aa15.46■□□□□ 0.07
CACNA1A-228ENST00000636610 TARSL2A2RTX5 802 aaKnown RBP15.46■□□□□ 0.07
CACNA1A-228ENST00000636610 G3V3G9 751 aa15.46■□□□□ 0.07
CACNA1A-228ENST00000636610 SERPINB2P05120 415 aa15.46■□□□□ 0.07
CACNA1A-228ENST00000636610 TUBBP07437 444 aa15.46■□□□□ 0.07
CACNA1A-228ENST00000636610 IVLP07476 585 aa15.46■□□□□ 0.07
CACNA1A-228ENST00000636610 MCM3P25205 808 aa15.46■□□□□ 0.07
CACNA1A-228ENST00000636610 HOXA13P31271 388 aaPredicted RBP15.46■□□□□ 0.07
CACNA1A-228ENST00000636610 HLTFQ14527 1009 aaKnown RBP eCLIP15.46■□□□□ 0.07
CACNA1A-228ENST00000636610 DCAF8Q5TAQ9 597 aa15.46■□□□□ 0.07
CACNA1A-228ENST00000636610 DDX42Q86XP3 938 aaKnown RBP eCLIP15.46■□□□□ 0.07
CACNA1A-228ENST00000636610 KSR1Q8IVT5 923 aa15.46■□□□□ 0.07
CACNA1A-228ENST00000636610 FNBP4Q8N3X1 1017 aaPredicted RBP15.46■□□□□ 0.07
CACNA1A-228ENST00000636610 CUL5Q93034 780 aa15.46■□□□□ 0.07
CACNA1A-228ENST00000636610 SERPINB13Q9UIV8 391 aa15.46■□□□□ 0.07
CACNA1A-228ENST00000636610 PVALEFA0A1B0GWK0 134 aa15.46■□□□□ 0.06
CACNA1A-228ENST00000636610 RSPH10B2B2RC85 870 aa15.46■□□□□ 0.06
CACNA1A-228ENST00000636610 MED24O75448 989 aa15.46■□□□□ 0.06
CACNA1A-228ENST00000636610 RSPH10BP0C881 870 aa15.46■□□□□ 0.06
CACNA1A-228ENST00000636610 NR2F2P24468 414 aa15.46■□□□□ 0.06
CACNA1A-228ENST00000636610 FXR2P51116 673 aaKnown RBP eCLIP15.46■□□□□ 0.06
CACNA1A-228ENST00000636610 BARGINQ6ZT62 677 aa15.46■□□□□ 0.06
CACNA1A-228ENST00000636610 ADAT2Q7Z6V5 191 aaKnown RBP15.46■□□□□ 0.06
CACNA1A-228ENST00000636610 CERS5Q8N5B7 392 aa15.46■□□□□ 0.06
CACNA1A-228ENST00000636610 CYP2W1Q8TAV3 490 aa15.46■□□□□ 0.06
CACNA1A-228ENST00000636610 BCAS4Q8TDM0 211 aa15.46■□□□□ 0.06
CACNA1A-228ENST00000636610 EMILIN3Q9NT22 766 aa15.46■□□□□ 0.06
CACNA1A-228ENST00000636610 ROBO3Q96MS0 1386 aa15.45■□□□□ 0.06
CACNA1A-228ENST00000636610 KCNK3O14649 394 aa15.45■□□□□ 0.06
CACNA1A-228ENST00000636610 UBXN2AP68543 259 aa15.45■□□□□ 0.06
CACNA1A-228ENST00000636610 ZNF543Q08ER8 600 aa15.45■□□□□ 0.06
CACNA1A-228ENST00000636610 SPICE1Q8N0Z3 855 aa15.45■□□□□ 0.06
CACNA1A-228ENST00000636610 SCFD1Q8WVM8 642 aa15.45■□□□□ 0.06
CACNA1A-228ENST00000636610 RPGRIP1Q96KN7 1286 aa15.45■□□□□ 0.06
CACNA1A-228ENST00000636610 SPAG5Q96R06 1193 aa15.45■□□□□ 0.06
CACNA1A-228ENST00000636610 PNMA6FA0A0J9YX94 578 aa15.45■□□□□ 0.06
CACNA1A-228ENST00000636610 CHMP2AO43633 222 aa15.45■□□□□ 0.06
CACNA1A-228ENST00000636610 FGFR1OPO95684 399 aaKnown RBP15.45■□□□□ 0.06
CACNA1A-228ENST00000636610 TTLL1O95922 423 aa15.45■□□□□ 0.06
CACNA1A-228ENST00000636610 AARSP49588 968 aaKnown RBP eCLIP15.45■□□□□ 0.06
CACNA1A-228ENST00000636610 LRRC63Q05C16 580 aa15.45■□□□□ 0.06
CACNA1A-228ENST00000636610 OR2W6PQ8NHA6 318 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms