RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 PRUNE2Q8WUY3 3088 aa20.57■□□□□ 0.88
PNKP-225ENST00000636214 EYSQ5T1H1 3165 aa20.57■□□□□ 0.88
PNKP-225ENST00000636214 GOLGA8AA7E2F4 631 aa20.57■□□□□ 0.88
PNKP-225ENST00000636214 GOLGA8BA8MQT2 603 aa20.57■□□□□ 0.88
PNKP-225ENST00000636214 GNAT1P11488 350 aa20.57■□□□□ 0.88
PNKP-225ENST00000636214 CNKSR3Q6P9H4 555 aa20.57■□□□□ 0.88
PNKP-225ENST00000636214 ATP6V0A1Q93050 837 aa20.57■□□□□ 0.88
PNKP-225ENST00000636214 GPRASP2Q96D09 838 aa20.57■□□□□ 0.88
PNKP-225ENST00000636214 VWCEQ96DN2 955 aa20.57■□□□□ 0.88
PNKP-225ENST00000636214 TCEANC2Q96MN5 208 aa20.57■□□□□ 0.88
PNKP-225ENST00000636214 SENP7Q9BQF6 1050 aa20.57■□□□□ 0.88
PNKP-225ENST00000636214 C16orf70Q9BSU1 422 aa20.57■□□□□ 0.88
PNKP-225ENST00000636214 DOCK5Q9H7D0 1870 aa20.56■□□□□ 0.88
PNKP-225ENST00000636214 EFCAB14O75071 495 aa20.56■□□□□ 0.88
PNKP-225ENST00000636214 MYOGP15173 224 aa20.56■□□□□ 0.88
PNKP-225ENST00000636214 NAPAP54920 295 aa20.56■□□□□ 0.88
PNKP-225ENST00000636214 COL9A3Q14050 684 aaPredicted RBP20.56■□□□□ 0.88
PNKP-225ENST00000636214 UBE2SQ16763 222 aa20.56■□□□□ 0.88
PNKP-225ENST00000636214 TSGA10IPQ3SY00 556 aa20.56■□□□□ 0.88
PNKP-225ENST00000636214 UTP14CQ5TAP6 766 aaKnown RBP20.56■□□□□ 0.88
PNKP-225ENST00000636214 PPM1EQ8WY54 764 aa20.56■□□□□ 0.88
PNKP-225ENST00000636214 CTAGE1Q96RT6 745 aa20.56■□□□□ 0.88
PNKP-225ENST00000636214 EMSYQ7Z589 1322 aa20.55■□□□□ 0.88
PNKP-225ENST00000636214 KLF18A0A0U1RQI7 1052 aa20.55■□□□□ 0.88
PNKP-225ENST00000636214 hCG_1984214I3L0E3 225 aa20.55■□□□□ 0.88
PNKP-225ENST00000636214 NEFLP07196 543 aa20.55■□□□□ 0.88
PNKP-225ENST00000636214 SMIM10L2AP0DMW4 78 aa20.55■□□□□ 0.88
PNKP-225ENST00000636214 SMIM10L2BP0DMW5 78 aa20.55■□□□□ 0.88
PNKP-225ENST00000636214 THPOP40225 353 aa20.55■□□□□ 0.88
PNKP-225ENST00000636214 ZNF200P98182 395 aaPredicted RBP20.55■□□□□ 0.88
PNKP-225ENST00000636214 EXOSC10Q01780 885 aaKnown RBP20.55■□□□□ 0.88
PNKP-225ENST00000636214 SEMA3FQ13275 785 aa20.55■□□□□ 0.88
PNKP-225ENST00000636214 PPP1R18Q6NYC8 613 aa20.55■□□□□ 0.88
PNKP-225ENST00000636214 HERC6Q8IVU3 1022 aa20.55■□□□□ 0.88
PNKP-225ENST00000636214 ZNF713Q8N859 430 aaPredicted RBP20.55■□□□□ 0.88
PNKP-225ENST00000636214 GPR20Q99678 358 aa20.55■□□□□ 0.88
PNKP-225ENST00000636214 ZBED2Q9BTP6 218 aa20.55■□□□□ 0.88
PNKP-225ENST00000636214 CNTNAP5Q8WYK1 1306 aa20.54■□□□□ 0.88
PNKP-225ENST00000636214 CHD9Q3L8U1 2897 aa20.54■□□□□ 0.88
PNKP-225ENST00000636214 CA3P07451 260 aa20.54■□□□□ 0.88
PNKP-225ENST00000636214 MTMR1Q13613 665 aa20.54■□□□□ 0.88
PNKP-225ENST00000636214 IKBKEQ14164 716 aa20.54■□□□□ 0.88
PNKP-225ENST00000636214 ADCK5Q3MIX3 580 aa20.54■□□□□ 0.88
PNKP-225ENST00000636214 ZNF618Q5T7W0 954 aa20.54■□□□□ 0.88
PNKP-225ENST00000636214 SERINC5Q86VE9 423 aa20.54■□□□□ 0.88
PNKP-225ENST00000636214 RASEFQ8IZ41 740 aa20.54■□□□□ 0.88
PNKP-225ENST00000636214 GLT8D2Q9H1C3 349 aa20.54■□□□□ 0.88
PNKP-225ENST00000636214 PCDHA6Q9UN73 950 aa20.54■□□□□ 0.88
PNKP-225ENST00000636214 PCDHA8Q9Y5H6 950 aa20.54■□□□□ 0.88
PNKP-225ENST00000636214 CCDC196A0A1B0GTZ2 297 aa20.53■□□□□ 0.88
PNKP-225ENST00000636214 ABHD14A-ACY1A0A1B0GW23 586 aa20.53■□□□□ 0.88
PNKP-225ENST00000636214 RSPH10B2B2RC85 870 aa20.53■□□□□ 0.88
PNKP-225ENST00000636214 TLL1O43897 1013 aa20.53■□□□□ 0.88
PNKP-225ENST00000636214 REC8O95072 547 aa20.53■□□□□ 0.88
PNKP-225ENST00000636214 CXCL10P02778 98 aa20.53■□□□□ 0.88
PNKP-225ENST00000636214 RSPH10BP0C881 870 aa20.53■□□□□ 0.88
PNKP-225ENST00000636214 ADCY7P51828 1080 aa20.53■□□□□ 0.88
PNKP-225ENST00000636214 RCAN1P53805 252 aa20.53■□□□□ 0.88
PNKP-225ENST00000636214 WDR5P61964 334 aaKnown RBP20.53■□□□□ 0.88
PNKP-225ENST00000636214 WWC2Q6AWC2 1192 aa20.53■□□□□ 0.88
PNKP-225ENST00000636214 TEX2Q8IWB9 1127 aa20.53■□□□□ 0.88
PNKP-225ENST00000636214 BCAS3Q9H6U6 928 aa20.53■□□□□ 0.88
PNKP-225ENST00000636214 GTPBP6O43824 516 aaPredicted RBP20.52■□□□□ 0.88
PNKP-225ENST00000636214 NBNO60934 754 aa20.52■□□□□ 0.88
PNKP-225ENST00000636214 FOSP01100 380 aaPredicted RBP20.52■□□□□ 0.88
PNKP-225ENST00000636214 METAP2P50579 478 aaKnown RBP eCLIP20.52■□□□□ 0.88
PNKP-225ENST00000636214 TRIM71Q2Q1W2 868 aaKnown RBP20.52■□□□□ 0.88
PNKP-225ENST00000636214 BLOC1S2Q6QNY1 142 aa20.52■□□□□ 0.88
PNKP-225ENST00000636214 TRIM50Q86XT4 487 aa20.52■□□□□ 0.88
PNKP-225ENST00000636214 JAKMIP1Q96N16 626 aaKnown RBP20.52■□□□□ 0.88
PNKP-225ENST00000636214 TSPYL2Q9H2G4 693 aaPredicted RBP20.52■□□□□ 0.88
PNKP-225ENST00000636214 PKD2L1Q9P0L9 805 aa20.52■□□□□ 0.88
PNKP-225ENST00000636214 V9GY48 417 aaPredicted RBP20.52■□□□□ 0.88
PNKP-225ENST00000636214 MAFGO15525 162 aa20.51■□□□□ 0.87
PNKP-225ENST00000636214 CAND2O75155 1236 aa20.51■□□□□ 0.87
PNKP-225ENST00000636214 LGR5O75473 907 aa20.51■□□□□ 0.87
PNKP-225ENST00000636214 ARHGAP4P98171 946 aa20.51■□□□□ 0.87
PNKP-225ENST00000636214 MICALL1Q8N3F8 863 aa20.51■□□□□ 0.87
PNKP-225ENST00000636214 SEPT1Q8WYJ6 367 aa20.51■□□□□ 0.87
PNKP-225ENST00000636214 WNT8BQ93098 351 aa20.51■□□□□ 0.87
PNKP-225ENST00000636214 RNPEPQ9H4A4 650 aa20.51■□□□□ 0.87
PNKP-225ENST00000636214 RIC8AQ9NPQ8 531 aa20.51■□□□□ 0.87
PNKP-225ENST00000636214 BRPF3Q9ULD4 1205 aa20.51■□□□□ 0.87
PNKP-225ENST00000636214 CHD7Q9P2D1 2997 aa20.51■□□□□ 0.87
PNKP-225ENST00000636214 TREHO43280 583 aa20.5■□□□□ 0.87
PNKP-225ENST00000636214 ITGB5P18084 799 aa20.5■□□□□ 0.87
PNKP-225ENST00000636214 PSMA5P28066 241 aa20.5■□□□□ 0.87
PNKP-225ENST00000636214 TCF7P36402 384 aaPredicted RBP20.5■□□□□ 0.87
PNKP-225ENST00000636214 CCDC85BQ15834 202 aaPredicted RBP20.5■□□□□ 0.87
PNKP-225ENST00000636214 USP38Q8NB14 1042 aa20.5■□□□□ 0.87
PNKP-225ENST00000636214 SYMPKQ92797 1274 aaKnown RBP20.5■□□□□ 0.87
PNKP-225ENST00000636214 GLG1Q92896 1179 aa20.5■□□□□ 0.87
PNKP-225ENST00000636214 COL25A1Q9BXS0 654 aaPredicted RBP20.5■□□□□ 0.87
PNKP-225ENST00000636214 JADE2Q9NQC1 790 aa20.5■□□□□ 0.87
PNKP-225ENST00000636214 SETD4Q9NVD3 440 aa20.5■□□□□ 0.87
PNKP-225ENST00000636214 UBIAD1Q9Y5Z9 338 aa20.5■□□□□ 0.87
PNKP-225ENST00000636214 SMCO2A6NFE2 343 aa20.49■□□□□ 0.87
PNKP-225ENST00000636214 KCNA2P16389 499 aa20.49■□□□□ 0.87
PNKP-225ENST00000636214 AKAP17AQ02040 695 aaKnown RBP20.49■□□□□ 0.87
PNKP-225ENST00000636214 ADGRE1Q14246 886 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms