RNA–Protein interactions for RNA: ENST00000636010.1

SPTAN1-229, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 1,472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-229ENST00000636010 KRT40Q6A162 431 aa13.16□□□□□ -0.3
SPTAN1-229ENST00000636010 NLRX1Q86UT6 975 aa13.16□□□□□ -0.3
SPTAN1-229ENST00000636010 TEX2Q8IWB9 1127 aa13.16□□□□□ -0.3
SPTAN1-229ENST00000636010 BICD2Q8TD16 824 aa13.16□□□□□ -0.3
SPTAN1-229ENST00000636010 TBCKQ8TEA7 893 aa13.16□□□□□ -0.3
SPTAN1-229ENST00000636010 TNFRSF25Q93038 417 aa13.16□□□□□ -0.3
SPTAN1-229ENST00000636010 LENG9Q96B70 501 aa13.16□□□□□ -0.3
SPTAN1-229ENST00000636010 PTPRSQ13332 1948 aa13.16□□□□□ -0.3
SPTAN1-229ENST00000636010 ELP1O95163 1332 aa13.16□□□□□ -0.3
SPTAN1-229ENST00000636010 A0A1W2PPC1 479 aa13.16□□□□□ -0.3
SPTAN1-229ENST00000636010 MEIS1O00470 390 aa13.16□□□□□ -0.3
SPTAN1-229ENST00000636010 TDP2O95551 362 aa13.16□□□□□ -0.3
SPTAN1-229ENST00000636010 HOXD8P13378 290 aaPredicted RBP13.16□□□□□ -0.3
SPTAN1-229ENST00000636010 ITGA7Q13683 1181 aa13.16□□□□□ -0.3
SPTAN1-229ENST00000636010 LAMC2Q13753 1193 aa13.16□□□□□ -0.3
SPTAN1-229ENST00000636010 INF2Q27J81 1249 aa13.16□□□□□ -0.3
SPTAN1-229ENST00000636010 C1orf53Q5VUE5 145 aa13.16□□□□□ -0.3
SPTAN1-229ENST00000636010 KCNV1Q6PIU1 500 aa13.16□□□□□ -0.3
SPTAN1-229ENST00000636010 METTL7BQ6UX53 244 aa13.16□□□□□ -0.3
SPTAN1-229ENST00000636010 TRIM50Q86XT4 487 aa13.16□□□□□ -0.3
SPTAN1-229ENST00000636010 SLC43A3Q8NBI5 491 aa13.16□□□□□ -0.3
SPTAN1-229ENST00000636010 PPTC7Q8NI37 304 aa13.16□□□□□ -0.3
SPTAN1-229ENST00000636010 GJA10Q969M2 543 aa13.16□□□□□ -0.3
SPTAN1-229ENST00000636010 VTI1AQ96AJ9 217 aa13.16□□□□□ -0.3
SPTAN1-229ENST00000636010 SPATA33Q96N06 139 aa13.16□□□□□ -0.3
SPTAN1-229ENST00000636010 GPR20Q99678 358 aa13.16□□□□□ -0.3
SPTAN1-229ENST00000636010 LLPHQ9BRT6 129 aaKnown RBP13.16□□□□□ -0.3
SPTAN1-229ENST00000636010 MLXIPQ9HAP2 919 aa13.16□□□□□ -0.3
SPTAN1-229ENST00000636010 AGO4Q9HCK5 861 aaKnown RBP13.16□□□□□ -0.3
SPTAN1-229ENST00000636010 PDLIM7Q9NR12 457 aa13.16□□□□□ -0.3
SPTAN1-229ENST00000636010 POLR3EQ9NVU0 708 aa13.16□□□□□ -0.3
SPTAN1-229ENST00000636010 LAMA2P24043 3122 aaKnown RBP13.15□□□□□ -0.3
SPTAN1-229ENST00000636010 A0A0U1RQG5 324 aaPredicted RBP13.15□□□□□ -0.3
SPTAN1-229ENST00000636010 BTBD18B2RXH4 712 aa13.15□□□□□ -0.3
SPTAN1-229ENST00000636010 ARVCFO00192 962 aa13.15□□□□□ -0.3
SPTAN1-229ENST00000636010 WNT7AO00755 349 aa13.15□□□□□ -0.3
SPTAN1-229ENST00000636010 MMP1P03956 469 aa13.15□□□□□ -0.3
SPTAN1-229ENST00000636010 ITGB8P26012 769 aa13.15□□□□□ -0.3
SPTAN1-229ENST00000636010 CHMP4BP1P59074 171 aa13.15□□□□□ -0.3
SPTAN1-229ENST00000636010 FAAP100Q0VG06 881 aa13.15□□□□□ -0.3
SPTAN1-229ENST00000636010 PLA2G4DQ86XP0 818 aa13.15□□□□□ -0.3
SPTAN1-229ENST00000636010 FAM126BQ8IXS8 530 aa13.15□□□□□ -0.3
SPTAN1-229ENST00000636010 WASF1Q92558 559 aa13.15□□□□□ -0.3
SPTAN1-229ENST00000636010 SENP7Q9BQF6 1050 aa13.15□□□□□ -0.3
SPTAN1-229ENST00000636010 MTG1Q9BT17 334 aaPredicted RBP13.15□□□□□ -0.3
SPTAN1-229ENST00000636010 TRIOBPQ9H2D6 2365 aa13.14□□□□□ -0.31
SPTAN1-229ENST00000636010 LAMA3Q16787 3333 aa13.14□□□□□ -0.31
SPTAN1-229ENST00000636010 GSTTP1A0A1W2PQM5 241 aa13.14□□□□□ -0.31
SPTAN1-229ENST00000636010 TRIM43BA6NCK2 446 aa13.14□□□□□ -0.31
SPTAN1-229ENST00000636010 DDX39AO00148 427 aaKnown RBP13.14□□□□□ -0.31
SPTAN1-229ENST00000636010 ZEB2O60315 1214 aa13.14□□□□□ -0.31
SPTAN1-229ENST00000636010 F2P00734 622 aa13.14□□□□□ -0.31
SPTAN1-229ENST00000636010 LGALS2P05162 132 aa13.14□□□□□ -0.31
SPTAN1-229ENST00000636010 CIITAP33076 1130 aa13.14□□□□□ -0.31
SPTAN1-229ENST00000636010 ZNF76P36508 570 aa13.14□□□□□ -0.31
SPTAN1-229ENST00000636010 NEDD9Q14511 834 aa13.14□□□□□ -0.31
SPTAN1-229ENST00000636010 HIC1Q14526 733 aa13.14□□□□□ -0.31
SPTAN1-229ENST00000636010 NBPF20Q3BBV1 942 aa13.14□□□□□ -0.31
SPTAN1-229ENST00000636010 PRR16Q569H4 304 aa13.14□□□□□ -0.31
SPTAN1-229ENST00000636010 GALNT17Q6IS24 598 aa13.14□□□□□ -0.31
SPTAN1-229ENST00000636010 PIK3AP1Q6ZUJ8 805 aa13.14□□□□□ -0.31
SPTAN1-229ENST00000636010 ANKRD33Q7Z3H0 272 aa13.14□□□□□ -0.31
SPTAN1-229ENST00000636010 DIS3L2Q8IYB7 885 aaKnown RBP13.14□□□□□ -0.31
SPTAN1-229ENST00000636010 TRIM43Q96BQ3 446 aaPredicted RBP13.14□□□□□ -0.31
SPTAN1-229ENST00000636010 C16orf70Q9BSU1 422 aa13.14□□□□□ -0.31
SPTAN1-229ENST00000636010 PRDM5Q9NQX1 630 aaPredicted RBP13.14□□□□□ -0.31
SPTAN1-229ENST00000636010 HAS3O00219 553 aa13.13□□□□□ -0.31
SPTAN1-229ENST00000636010 DHX15O43143 795 aaKnown RBP13.13□□□□□ -0.31
SPTAN1-229ENST00000636010 SLC37A4O43826 429 aa13.13□□□□□ -0.31
SPTAN1-229ENST00000636010 B4GALT4O60513 344 aa13.13□□□□□ -0.31
SPTAN1-229ENST00000636010 CABYRO75952 493 aa13.13□□□□□ -0.31
SPTAN1-229ENST00000636010 CCNE2O96020 404 aa13.13□□□□□ -0.31
SPTAN1-229ENST00000636010 CD4P01730 458 aa13.13□□□□□ -0.31
SPTAN1-229ENST00000636010 XBP1P17861 261 aa13.13□□□□□ -0.31
SPTAN1-229ENST00000636010 KRT2P35908 639 aa13.13□□□□□ -0.31
SPTAN1-229ENST00000636010 NONOQ15233 471 aaKnown RBP eCLIP13.13□□□□□ -0.31
SPTAN1-229ENST00000636010 DGKDQ16760 1214 aa13.13□□□□□ -0.31
SPTAN1-229ENST00000636010 MCTP2Q6DN12 878 aa13.13□□□□□ -0.31
SPTAN1-229ENST00000636010 NIPA1Q7RTP0 329 aa13.13□□□□□ -0.31
SPTAN1-229ENST00000636010 FAM177A1Q8N128 213 aaPredicted RBP13.13□□□□□ -0.31
SPTAN1-229ENST00000636010 TRPV6Q9H1D0 765 aa13.13□□□□□ -0.31
SPTAN1-229ENST00000636010 TRMT13Q9NUP7 481 aaKnown RBP13.13□□□□□ -0.31
SPTAN1-229ENST00000636010 UMODL1Q5DID0 1318 aa13.13□□□□□ -0.31
SPTAN1-229ENST00000636010 KIF28PB7ZC32 967 aa13.12□□□□□ -0.31
SPTAN1-229ENST00000636010 NOP56O00567 594 aaKnown RBP13.12□□□□□ -0.31
SPTAN1-229ENST00000636010 MSH4O15457 936 aa13.12□□□□□ -0.31
SPTAN1-229ENST00000636010 CLTBP09497 229 aa13.12□□□□□ -0.31
SPTAN1-229ENST00000636010 TCF7P36402 384 aaPredicted RBP13.12□□□□□ -0.31
SPTAN1-229ENST00000636010 PSEN2P49810 448 aa13.12□□□□□ -0.31
SPTAN1-229ENST00000636010 HMGN5P82970 282 aaKnown RBP13.12□□□□□ -0.31
SPTAN1-229ENST00000636010 BRDTQ58F21 947 aaPredicted RBP13.12□□□□□ -0.31
SPTAN1-229ENST00000636010 FAM47CQ5HY64 1035 aa13.12□□□□□ -0.31
SPTAN1-229ENST00000636010 UTP14CQ5TAP6 766 aaKnown RBP13.12□□□□□ -0.31
SPTAN1-229ENST00000636010 KRT25Q7Z3Z0 450 aa13.12□□□□□ -0.31
SPTAN1-229ENST00000636010 CDHR1Q96JP9 859 aa13.12□□□□□ -0.31
SPTAN1-229ENST00000636010 C8orf76Q96K31 380 aa13.12□□□□□ -0.31
SPTAN1-229ENST00000636010 CTAGE1Q96RT6 745 aa13.12□□□□□ -0.31
SPTAN1-229ENST00000636010 PCYT2Q99447 389 aa13.12□□□□□ -0.31
SPTAN1-229ENST00000636010 NFASCO94856 1347 aa13.12□□□□□ -0.31
SPTAN1-229ENST00000636010 CCDC194A0A1B0GVG4 234 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms