RNA–Protein interactions for RNA: ENST00000635893.1

SCN1A-211, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 168 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-211ENST00000635893 SLFN13Q68D06 897 aa5.41□□□□□ -1.54
SCN1A-211ENST00000635893 CYP4F22Q6NT55 531 aa5.41□□□□□ -1.54
SCN1A-211ENST00000635893 TRMT10BQ6PF06 316 aaKnown RBP5.41□□□□□ -1.54
SCN1A-211ENST00000635893 CRIP3Q6Q6R5 217 aa5.41□□□□□ -1.54
SCN1A-211ENST00000635893 TRIM48Q8IWZ4 208 aa5.41□□□□□ -1.54
SCN1A-211ENST00000635893 C1orf159Q96HA4 380 aa5.41□□□□□ -1.54
SCN1A-211ENST00000635893 SCAND2PQ9GZW5 306 aaPredicted RBP5.41□□□□□ -1.54
SCN1A-211ENST00000635893 DEF6Q9H4E7 631 aa5.41□□□□□ -1.54
SCN1A-211ENST00000635893 WASF3Q9UPY6 502 aa5.41□□□□□ -1.54
SCN1A-211ENST00000635893 NPFFR2Q9Y5X5 522 aa5.41□□□□□ -1.54
SCN1A-211ENST00000635893 MRVI1Q9Y6F6 885 aa5.41□□□□□ -1.54
SCN1A-211ENST00000635893 KRIT1O00522 736 aa5.4□□□□□ -1.54
SCN1A-211ENST00000635893 CYR61O00622 381 aa5.4□□□□□ -1.54
SCN1A-211ENST00000635893 B4GALT4O60513 344 aa5.4□□□□□ -1.54
SCN1A-211ENST00000635893 CAPNS1P04632 268 aa5.4□□□□□ -1.54
SCN1A-211ENST00000635893 SSBP05455 408 aaKnown RBP eCLIP5.4□□□□□ -1.54
SCN1A-211ENST00000635893 KRTAP5-3Q6L8H2 238 aa5.4□□□□□ -1.54
SCN1A-211ENST00000635893 TMC5Q6UXY8 1006 aa5.4□□□□□ -1.54
SCN1A-211ENST00000635893 VPS37DQ86XT2 251 aa5.4□□□□□ -1.54
SCN1A-211ENST00000635893 Q8N1X5 172 aa5.4□□□□□ -1.54
SCN1A-211ENST00000635893 TTLL11Q8NHH1 800 aa5.4□□□□□ -1.54
SCN1A-211ENST00000635893 CDIP1Q9H305 208 aa5.4□□□□□ -1.54
SCN1A-211ENST00000635893 CAPN10Q9HC96 672 aa5.4□□□□□ -1.54
SCN1A-211ENST00000635893 SLC6A20Q9NP91 592 aa5.4□□□□□ -1.54
SCN1A-211ENST00000635893 KIAA1522Q9P206 1035 aaPredicted RBP5.4□□□□□ -1.54
SCN1A-211ENST00000635893 ASH2LQ9UBL3 628 aa5.4□□□□□ -1.54
SCN1A-211ENST00000635893 PRKAG3Q9UGI9 489 aa5.4□□□□□ -1.54
SCN1A-211ENST00000635893 ZDHHC9Q9Y397 364 aa5.4□□□□□ -1.54
SCN1A-211ENST00000635893 TCAF1Q9Y4C2 921 aa5.4□□□□□ -1.54
SCN1A-211ENST00000635893 PATE3B3GLJ2 98 aa5.39□□□□□ -1.55
SCN1A-211ENST00000635893 ACVRL1P37023 503 aa5.39□□□□□ -1.55
SCN1A-211ENST00000635893 SELENOPP49908 381 aa5.39□□□□□ -1.55
SCN1A-211ENST00000635893 HMGA2P52926 109 aa5.39□□□□□ -1.55
SCN1A-211ENST00000635893 MAP4K2Q12851 820 aa5.39□□□□□ -1.55
SCN1A-211ENST00000635893 MRM1Q6IN84 353 aaKnown RBP5.39□□□□□ -1.55
SCN1A-211ENST00000635893 KCTD13Q8WZ19 329 aa5.39□□□□□ -1.55
SCN1A-211ENST00000635893 EPN3Q9H201 632 aa5.39□□□□□ -1.55
SCN1A-211ENST00000635893 SEMA4AQ9H3S1 761 aa5.39□□□□□ -1.55
SCN1A-211ENST00000635893 GPR27Q9NS67 375 aa5.39□□□□□ -1.55
SCN1A-211ENST00000635893 ADAM29Q9UKF5 820 aa5.39□□□□□ -1.55
SCN1A-211ENST00000635893 AGRPO00253 132 aa5.38□□□□□ -1.55
SCN1A-211ENST00000635893 FZD7O75084 574 aa5.38□□□□□ -1.55
SCN1A-211ENST00000635893 COL6A1P12109 1028 aa5.38□□□□□ -1.55
SCN1A-211ENST00000635893 VASNQ6EMK4 673 aa5.38□□□□□ -1.55
SCN1A-211ENST00000635893 ZNF585AQ6P3V2 769 aa5.38□□□□□ -1.55
SCN1A-211ENST00000635893 USP51Q70EK9 711 aa5.38□□□□□ -1.55
SCN1A-211ENST00000635893 EEPD1Q7L9B9 569 aa5.38□□□□□ -1.55
SCN1A-211ENST00000635893 DTX3Q8N9I9 347 aa5.38□□□□□ -1.55
SCN1A-211ENST00000635893 MICAL1Q8TDZ2 1067 aa5.38□□□□□ -1.55
SCN1A-211ENST00000635893 PTPN18Q99952 460 aa5.38□□□□□ -1.55
SCN1A-211ENST00000635893 ZNF747Q9BV97 191 aa5.38□□□□□ -1.55
SCN1A-211ENST00000635893 VPS11Q9H270 941 aa5.38□□□□□ -1.55
SCN1A-211ENST00000635893 DLL4Q9NR61 685 aa5.38□□□□□ -1.55
SCN1A-211ENST00000635893 RBPJLQ9UBG7 517 aa5.38□□□□□ -1.55
SCN1A-211ENST00000635893 ZNF623O75123 536 aa5.37□□□□□ -1.55
SCN1A-211ENST00000635893 KLHL18O94889 574 aa5.37□□□□□ -1.55
SCN1A-211ENST00000635893 SLPIP03973 132 aa5.37□□□□□ -1.55
SCN1A-211ENST00000635893 CHGBP05060 677 aa5.37□□□□□ -1.55
SCN1A-211ENST00000635893 PPP2R2AP63151 447 aa5.37□□□□□ -1.55
SCN1A-211ENST00000635893 R3HDM1Q15032 1099 aaKnown RBP5.37□□□□□ -1.55
SCN1A-211ENST00000635893 SMAD2Q15796 467 aaKnown RBP5.37□□□□□ -1.55
SCN1A-211ENST00000635893 PROSER1Q86XN7 944 aa5.37□□□□□ -1.55
SCN1A-211ENST00000635893 PALM2Q8IXS6 379 aa5.37□□□□□ -1.55
SCN1A-211ENST00000635893 NUDT10Q8NFP7 164 aa5.37□□□□□ -1.55
SCN1A-211ENST00000635893 PIP4K2CQ8TBX8 421 aa5.37□□□□□ -1.55
SCN1A-211ENST00000635893 NUDT11Q96G61 164 aa5.37□□□□□ -1.55
SCN1A-211ENST00000635893 WWC2-AS2Q96NR7 200 aa5.37□□□□□ -1.55
SCN1A-211ENST00000635893 MRIQ9BWK5 157 aa5.37□□□□□ -1.55
SCN1A-211ENST00000635893 JAM3Q9BX67 310 aa5.37□□□□□ -1.55
SCN1A-211ENST00000635893 MEGF9Q9H1U4 602 aa5.37□□□□□ -1.55
SCN1A-211ENST00000635893 TESMINQ9Y4I5 508 aa5.37□□□□□ -1.55
SCN1A-211ENST00000635893 SLC27A2O14975 620 aa5.36□□□□□ -1.55
SCN1A-211ENST00000635893 MUSKO15146 869 aa5.36□□□□□ -1.55
SCN1A-211ENST00000635893 AMHP03971 560 aa5.36□□□□□ -1.55
SCN1A-211ENST00000635893 ETFBP38117 255 aa5.36□□□□□ -1.55
SCN1A-211ENST00000635893 GRIA2P42262 883 aa5.36□□□□□ -1.55
SCN1A-211ENST00000635893 SLC10A6Q3KNW5 377 aa5.36□□□□□ -1.55
SCN1A-211ENST00000635893 RSPO2Q6UXX9 243 aaPredicted RBP5.36□□□□□ -1.55
SCN1A-211ENST00000635893 Q6ZUG5 572 aa5.36□□□□□ -1.55
SCN1A-211ENST00000635893 RALYLQ86SE5 291 aaKnown RBP5.36□□□□□ -1.55
SCN1A-211ENST00000635893 ZFPM1Q8IX07 1006 aa5.36□□□□□ -1.55
SCN1A-211ENST00000635893 CLEC4DQ8WXI8 215 aa5.36□□□□□ -1.55
SCN1A-211ENST00000635893 SEC61A2Q9H9S3 476 aa5.36□□□□□ -1.55
SCN1A-211ENST00000635893 NUB1Q9Y5A7 615 aa5.36□□□□□ -1.55
SCN1A-211ENST00000635893 DLX3O60479 287 aa5.35□□□□□ -1.55
SCN1A-211ENST00000635893 FBXO21O94952 628 aa5.35□□□□□ -1.55
SCN1A-211ENST00000635893 GJB6O95452 261 aa5.35□□□□□ -1.55
SCN1A-211ENST00000635893 CNOT4O95628 575 aaKnown RBP5.35□□□□□ -1.55
SCN1A-211ENST00000635893 GRIN1Q05586 938 aa5.35□□□□□ -1.55
SCN1A-211ENST00000635893 OTOP3Q7RTS5 596 aa5.35□□□□□ -1.55
SCN1A-211ENST00000635893 Q8TCH9 128 aa5.35□□□□□ -1.55
SCN1A-211ENST00000635893 AJUBAQ96IF1 538 aa5.35□□□□□ -1.55
SCN1A-211ENST00000635893 IER2Q9BTL4 223 aa5.35□□□□□ -1.55
SCN1A-211ENST00000635893 PHF20Q9BVI0 1012 aa5.35□□□□□ -1.55
SCN1A-211ENST00000635893 PDGFDQ9GZP0 370 aaPredicted RBP5.35□□□□□ -1.55
SCN1A-211ENST00000635893 A0A1W2PQU0 124 aa5.34□□□□□ -1.55
SCN1A-211ENST00000635893 UNCXA6NJT0 531 aa5.34□□□□□ -1.55
SCN1A-211ENST00000635893 MSCO60682 206 aa5.34□□□□□ -1.55
SCN1A-211ENST00000635893 KNG1P01042 644 aa5.34□□□□□ -1.55
SCN1A-211ENST00000635893 CKMP06732 381 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms