RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 SLC7A5Q01650 507 aa1.93□□□□□ -2.1
SMARCB1-209ENST00000635578 GRIN1Q05586 938 aa1.93□□□□□ -2.1
SMARCB1-209ENST00000635578 FSTL1Q12841 308 aa1.93□□□□□ -2.1
SMARCB1-209ENST00000635578 NOLC1Q14978 699 aaKnown RBP eCLIP1.93□□□□□ -2.1
SMARCB1-209ENST00000635578 ZNF568Q3ZCX4 644 aa1.93□□□□□ -2.1
SMARCB1-209ENST00000635578 FNDC7Q5VTL7 733 aa1.93□□□□□ -2.1
SMARCB1-209ENST00000635578 RIOX2Q8IUF8 465 aa1.93□□□□□ -2.1
SMARCB1-209ENST00000635578 ZNF808Q8N4W9 903 aaPredicted RBP1.93□□□□□ -2.1
SMARCB1-209ENST00000635578 CLIP3Q96DZ5 547 aa1.93□□□□□ -2.1
SMARCB1-209ENST00000635578 TMEM169Q96HH4 297 aa1.93□□□□□ -2.1
SMARCB1-209ENST00000635578 CHAMP1Q96JM3 812 aa1.93□□□□□ -2.1
SMARCB1-209ENST00000635578 MMP19Q99542 508 aa1.93□□□□□ -2.1
SMARCB1-209ENST00000635578 DPYSL5Q9BPU6 564 aa1.93□□□□□ -2.1
SMARCB1-209ENST00000635578 TTPALQ9BTX7 342 aa1.93□□□□□ -2.1
SMARCB1-209ENST00000635578 TRAIPQ9BWF2 469 aa1.93□□□□□ -2.1
SMARCB1-209ENST00000635578 LGR4Q9BXB1 951 aa1.93□□□□□ -2.1
SMARCB1-209ENST00000635578 APEX2Q9UBZ4 518 aa1.93□□□□□ -2.1
SMARCB1-209ENST00000635578 ZFP69BQ9UJL9 534 aa1.93□□□□□ -2.1
SMARCB1-209ENST00000635578 FBXL7Q9UJT9 491 aa1.93□□□□□ -2.1
SMARCB1-209ENST00000635578 ZNF652Q9Y2D9 606 aa1.93□□□□□ -2.1
SMARCB1-209ENST00000635578 TIMM13Q9Y5L4 95 aaPredicted RBP1.93□□□□□ -2.1
SMARCB1-209ENST00000635578 PCSK5Q92824 1860 aa1.92□□□□□ -2.1
SMARCB1-209ENST00000635578 MYO1BO43795 1136 aa1.92□□□□□ -2.1
SMARCB1-209ENST00000635578 CDC14BO60729 498 aa1.92□□□□□ -2.1
SMARCB1-209ENST00000635578 KNG1P01042 644 aa1.92□□□□□ -2.1
SMARCB1-209ENST00000635578 MAKP20794 623 aa1.92□□□□□ -2.1
SMARCB1-209ENST00000635578 ACRV1P26436 265 aa1.92□□□□□ -2.1
SMARCB1-209ENST00000635578 ITGAEP38570 1179 aa1.92□□□□□ -2.1
SMARCB1-209ENST00000635578 RRADP55042 308 aa1.92□□□□□ -2.1
SMARCB1-209ENST00000635578 RAC3P60763 192 aa1.92□□□□□ -2.1
SMARCB1-209ENST00000635578 MRPS21P82921 87 aaKnown RBP1.92□□□□□ -2.1
SMARCB1-209ENST00000635578 RBM10P98175 930 aaKnown RBP1.92□□□□□ -2.1
SMARCB1-209ENST00000635578 USP10Q14694 798 aaKnown RBP1.92□□□□□ -2.1
SMARCB1-209ENST00000635578 SMAD2Q15796 467 aaKnown RBP1.92□□□□□ -2.1
SMARCB1-209ENST00000635578 CHRNA2Q15822 529 aa1.92□□□□□ -2.1
SMARCB1-209ENST00000635578 GTF2IRD2BQ6EKJ0 949 aa1.92□□□□□ -2.1
SMARCB1-209ENST00000635578 VASNQ6EMK4 673 aa1.92□□□□□ -2.1
SMARCB1-209ENST00000635578 Q6ZSN1 163 aa1.92□□□□□ -2.1
SMARCB1-209ENST00000635578 GTF2IRD2Q86UP8 949 aa1.92□□□□□ -2.1
SMARCB1-209ENST00000635578 GLCCI1Q86VQ1 547 aa1.92□□□□□ -2.1
SMARCB1-209ENST00000635578 CCDC103Q8IW40 242 aa1.92□□□□□ -2.1
SMARCB1-209ENST00000635578 STPG3Q8N7X2 389 aa1.92□□□□□ -2.1
SMARCB1-209ENST00000635578 FRS2Q8WU20 508 aa1.92□□□□□ -2.1
SMARCB1-209ENST00000635578 DIO2Q92813 273 aa1.92□□□□□ -2.1
SMARCB1-209ENST00000635578 COPS5Q92905 334 aa1.92□□□□□ -2.1
SMARCB1-209ENST00000635578 FAM89AQ96GI7 184 aa1.92□□□□□ -2.1
SMARCB1-209ENST00000635578 RCC1LQ96I51 464 aaKnown RBP1.92□□□□□ -2.1
SMARCB1-209ENST00000635578 CRBNQ96SW2 442 aa1.92□□□□□ -2.1
SMARCB1-209ENST00000635578 GZF1Q9H116 711 aaPredicted RBP1.92□□□□□ -2.1
SMARCB1-209ENST00000635578 C12orf65Q9H3J6 166 aaKnown RBP1.92□□□□□ -2.1
SMARCB1-209ENST00000635578 PHAXQ9H814 394 aaKnown RBP1.92□□□□□ -2.1
SMARCB1-209ENST00000635578 SLC2A4RGQ9NR83 387 aa1.92□□□□□ -2.1
SMARCB1-209ENST00000635578 MYOTQ9UBF9 498 aa1.92□□□□□ -2.1
SMARCB1-209ENST00000635578 OAZ3Q9UMX2 235 aa1.92□□□□□ -2.1
SMARCB1-209ENST00000635578 PCDHA2Q9Y5H9 948 aa1.92□□□□□ -2.1
SMARCB1-209ENST00000635578 X6R8D5 127 aa1.92□□□□□ -2.1
SMARCB1-209ENST00000635578 H0Y858 1186 aa1.91□□□□□ -2.1
SMARCB1-209ENST00000635578 NOP56O00567 594 aaKnown RBP1.91□□□□□ -2.1
SMARCB1-209ENST00000635578 DGKIO75912 1065 aa1.91□□□□□ -2.1
SMARCB1-209ENST00000635578 CKMP06732 381 aa1.91□□□□□ -2.1
SMARCB1-209ENST00000635578 CR2P20023 1033 aa1.91□□□□□ -2.1
SMARCB1-209ENST00000635578 HIBADHP31937 336 aaKnown RBP1.91□□□□□ -2.1
SMARCB1-209ENST00000635578 MSX2P35548 267 aaPredicted RBP1.91□□□□□ -2.1
SMARCB1-209ENST00000635578 ECI1P42126 302 aa1.91□□□□□ -2.1
SMARCB1-209ENST00000635578 ZC3H6P61129 1189 aaKnown RBP1.91□□□□□ -2.1
SMARCB1-209ENST00000635578 PPP2R5EQ16537 467 aa1.91□□□□□ -2.1
SMARCB1-209ENST00000635578 CCDC142Q17RM4 750 aa1.91□□□□□ -2.1
SMARCB1-209ENST00000635578 SKIDA1Q1XH10 827 aa1.91□□□□□ -2.1
SMARCB1-209ENST00000635578 RNF151Q2KHN1 245 aa1.91□□□□□ -2.1
SMARCB1-209ENST00000635578 LRCH2Q5VUJ6 765 aa1.91□□□□□ -2.1
SMARCB1-209ENST00000635578 KIAA1211LQ6NV74 962 aa1.91□□□□□ -2.1
SMARCB1-209ENST00000635578 POMZP3Q6PJE2 187 aa1.91□□□□□ -2.1
SMARCB1-209ENST00000635578 PCSK4Q6UW60 755 aa1.91□□□□□ -2.1
SMARCB1-209ENST00000635578 DNAJC14Q6Y2X3 702 aaPredicted RBP1.91□□□□□ -2.1
SMARCB1-209ENST00000635578 SND1Q7KZF4 910 aaKnown RBP eCLIP1.91□□□□□ -2.1
SMARCB1-209ENST00000635578 POLNQ7Z5Q5 900 aa1.91□□□□□ -2.1
SMARCB1-209ENST00000635578 RBM12BQ8IXT5 1001 aaKnown RBP1.91□□□□□ -2.1
SMARCB1-209ENST00000635578 DTX3Q8N9I9 347 aa1.91□□□□□ -2.1
SMARCB1-209ENST00000635578 RBBP8NLQ8NC74 664 aaPredicted RBP1.91□□□□□ -2.1
SMARCB1-209ENST00000635578 NPLOC4Q8TAT6 608 aa1.91□□□□□ -2.1
SMARCB1-209ENST00000635578 KLHL6Q8WZ60 621 aa1.91□□□□□ -2.1
SMARCB1-209ENST00000635578 AJUBAQ96IF1 538 aa1.91□□□□□ -2.1
SMARCB1-209ENST00000635578 PLA2G12BQ9BX93 195 aa1.91□□□□□ -2.1
SMARCB1-209ENST00000635578 TLR9Q9NR96 1032 aa1.91□□□□□ -2.1
SMARCB1-209ENST00000635578 CLDND1Q9NY35 253 aa1.91□□□□□ -2.1
SMARCB1-209ENST00000635578 ARHGAP20Q9P2F6 1191 aa1.91□□□□□ -2.1
SMARCB1-209ENST00000635578 EMC9Q9Y3B6 208 aa1.91□□□□□ -2.1
SMARCB1-209ENST00000635578 A0A1W2PQH9 124 aa1.9□□□□□ -2.11
SMARCB1-209ENST00000635578 ANKRD34BA5PLL1 514 aa1.9□□□□□ -2.11
SMARCB1-209ENST00000635578 MEFVO15553 781 aaPredicted RBP1.9□□□□□ -2.11
SMARCB1-209ENST00000635578 TADA3O75528 432 aa1.9□□□□□ -2.11
SMARCB1-209ENST00000635578 NUDT3O95989 172 aa1.9□□□□□ -2.11
SMARCB1-209ENST00000635578 SNRPB2P08579 225 aaKnown RBP1.9□□□□□ -2.11
SMARCB1-209ENST00000635578 LCP1P13796 627 aa1.9□□□□□ -2.11
SMARCB1-209ENST00000635578 KRT4P19013 534 aa1.9□□□□□ -2.11
SMARCB1-209ENST00000635578 CYP4F3Q08477 520 aa1.9□□□□□ -2.11
SMARCB1-209ENST00000635578 KCNAB2Q13303 367 aa1.9□□□□□ -2.11
SMARCB1-209ENST00000635578 PRSS53Q2L4Q9 553 aa1.9□□□□□ -2.11
SMARCB1-209ENST00000635578 EMC4Q5J8M3 183 aa1.9□□□□□ -2.11
SMARCB1-209ENST00000635578 IQCEQ6IPM2 695 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms