RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 PRKAB1Q9Y478 270 aa3.8□□□□□ -1.8
PSPC1-208ENST00000635562 BACE2Q9Y5Z0 518 aa3.8□□□□□ -1.8
PSPC1-208ENST00000635562 FAM83GA6ND36 823 aa3.79□□□□□ -1.8
PSPC1-208ENST00000635562 C2orf71A6NGG8 1288 aa3.79□□□□□ -1.8
PSPC1-208ENST00000635562 K7ESM1 405 aa3.79□□□□□ -1.8
PSPC1-208ENST00000635562 STXBP3O00186 592 aa3.79□□□□□ -1.8
PSPC1-208ENST00000635562 SNRPB2P08579 225 aaKnown RBP3.79□□□□□ -1.8
PSPC1-208ENST00000635562 VIL1P09327 827 aaKnown RBP3.79□□□□□ -1.8
PSPC1-208ENST00000635562 MSL3P1P0C860 447 aa3.79□□□□□ -1.8
PSPC1-208ENST00000635562 PAX3P23760 479 aa3.79□□□□□ -1.8
PSPC1-208ENST00000635562 NOP2P46087 812 aaKnown RBP3.79□□□□□ -1.8
PSPC1-208ENST00000635562 SLURP1P55000 103 aa3.79□□□□□ -1.8
PSPC1-208ENST00000635562 KRTAP10-2P60368 255 aa3.79□□□□□ -1.8
PSPC1-208ENST00000635562 GABREP78334 506 aa3.79□□□□□ -1.8
PSPC1-208ENST00000635562 E4F1Q66K89 784 aaPredicted RBP3.79□□□□□ -1.8
PSPC1-208ENST00000635562 STYK1Q6J9G0 422 aa3.79□□□□□ -1.8
PSPC1-208ENST00000635562 MAMDC2Q7Z304 686 aaPredicted RBP3.79□□□□□ -1.8
PSPC1-208ENST00000635562 GGNQ86UU5 652 aa3.79□□□□□ -1.8
PSPC1-208ENST00000635562 CCDC103Q8IW40 242 aa3.79□□□□□ -1.8
PSPC1-208ENST00000635562 SYT8Q8NBV8 401 aa3.79□□□□□ -1.8
PSPC1-208ENST00000635562 TMEM52Q8NDY8 209 aa3.79□□□□□ -1.8
PSPC1-208ENST00000635562 SLC7A14Q8TBB6 771 aa3.79□□□□□ -1.8
PSPC1-208ENST00000635562 IPO4Q8TEX9 1081 aaKnown RBP3.79□□□□□ -1.8
PSPC1-208ENST00000635562 PNISRQ8TF01 805 aaKnown RBP3.79□□□□□ -1.8
PSPC1-208ENST00000635562 MMP19Q99542 508 aa3.79□□□□□ -1.8
PSPC1-208ENST00000635562 ADAM7Q9H2U9 754 aa3.79□□□□□ -1.8
PSPC1-208ENST00000635562 TMX1Q9H3N1 280 aa3.79□□□□□ -1.8
PSPC1-208ENST00000635562 ASXL2Q76L83 1435 aa3.78□□□□□ -1.8
PSPC1-208ENST00000635562 A0A087X0B3 334 aa3.78□□□□□ -1.8
PSPC1-208ENST00000635562 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.78□□□□□ -1.8
PSPC1-208ENST00000635562 SH3D21A4FU49 640 aa3.78□□□□□ -1.8
PSPC1-208ENST00000635562 CCER2I3L3R5 266 aa3.78□□□□□ -1.8
PSPC1-208ENST00000635562 RAPGEF3O95398 923 aa3.78□□□□□ -1.8
PSPC1-208ENST00000635562 IBSPP21815 317 aaPredicted RBP3.78□□□□□ -1.8
PSPC1-208ENST00000635562 ECI1P42126 302 aa3.78□□□□□ -1.8
PSPC1-208ENST00000635562 MASP1P48740 699 aa3.78□□□□□ -1.8
PSPC1-208ENST00000635562 ZNF200P98182 395 aaPredicted RBP3.78□□□□□ -1.8
PSPC1-208ENST00000635562 ZNF827Q17R98 1081 aa3.78□□□□□ -1.8
PSPC1-208ENST00000635562 VMACQ2NL98 169 aa3.78□□□□□ -1.8
PSPC1-208ENST00000635562 UBXN11Q5T124 520 aa3.78□□□□□ -1.8
PSPC1-208ENST00000635562 WDR78Q5VTH9 848 aa3.78□□□□□ -1.8
PSPC1-208ENST00000635562 EEF1DP3Q658K8 133 aa3.78□□□□□ -1.8
PSPC1-208ENST00000635562 RSPO2Q6UXX9 243 aaPredicted RBP3.78□□□□□ -1.8
PSPC1-208ENST00000635562 ZPBP2Q6X784 338 aa3.78□□□□□ -1.8
PSPC1-208ENST00000635562 RINLQ6ZS11 566 aa3.78□□□□□ -1.8
PSPC1-208ENST00000635562 CABP7Q86V35 215 aa3.78□□□□□ -1.8
PSPC1-208ENST00000635562 CCAR1Q8IX12 1150 aaKnown RBP3.78□□□□□ -1.8
PSPC1-208ENST00000635562 SDR16C5Q8N3Y7 309 aa3.78□□□□□ -1.8
PSPC1-208ENST00000635562 TP53I13Q8NBR0 393 aaPredicted RBP3.78□□□□□ -1.8
PSPC1-208ENST00000635562 DCAF4Q8WV16 495 aa3.78□□□□□ -1.8
PSPC1-208ENST00000635562 PTPRN2Q92932 1015 aa3.78□□□□□ -1.8
PSPC1-208ENST00000635562 JMJD8Q96S16 334 aa3.78□□□□□ -1.8
PSPC1-208ENST00000635562 TMPRSS5Q9H3S3 457 aa3.78□□□□□ -1.8
PSPC1-208ENST00000635562 SLC52A2Q9HAB3 445 aa3.78□□□□□ -1.8
PSPC1-208ENST00000635562 GPRC5CQ9NQ84 441 aa3.78□□□□□ -1.8
PSPC1-208ENST00000635562 JADE2Q9NQC1 790 aa3.78□□□□□ -1.8
PSPC1-208ENST00000635562 PDLIM7Q9NR12 457 aa3.78□□□□□ -1.8
PSPC1-208ENST00000635562 AP5S1Q9NUS5 200 aa3.78□□□□□ -1.8
PSPC1-208ENST00000635562 INTS7Q9NVH2 962 aaKnown RBP3.78□□□□□ -1.8
PSPC1-208ENST00000635562 GNL3LQ9NVN8 582 aaKnown RBP3.78□□□□□ -1.8
PSPC1-208ENST00000635562 COMMD10Q9Y6G5 202 aa3.78□□□□□ -1.8
PSPC1-208ENST00000635562 BLACEA4D250 179 aa3.77□□□□□ -1.81
PSPC1-208ENST00000635562 FFAR3O14843 346 aa3.77□□□□□ -1.81
PSPC1-208ENST00000635562 EFCAB14O75071 495 aa3.77□□□□□ -1.81
PSPC1-208ENST00000635562 DNAJC8O75937 253 aaPredicted RBP3.77□□□□□ -1.81
PSPC1-208ENST00000635562 TBC1D8O95759 1140 aa3.77□□□□□ -1.81
PSPC1-208ENST00000635562 DBHP09172 617 aa3.77□□□□□ -1.81
PSPC1-208ENST00000635562 GSTM1P09488 218 aa3.77□□□□□ -1.81
PSPC1-208ENST00000635562 NCAM1P13591 858 aa3.77□□□□□ -1.81
PSPC1-208ENST00000635562 PLS3P13797 630 aa3.77□□□□□ -1.81
PSPC1-208ENST00000635562 SDSP20132 328 aa3.77□□□□□ -1.81
PSPC1-208ENST00000635562 KCNJ6P48051 423 aa3.77□□□□□ -1.81
PSPC1-208ENST00000635562 RTP5Q14D33 572 aa3.77□□□□□ -1.81
PSPC1-208ENST00000635562 INF2Q27J81 1249 aa3.77□□□□□ -1.81
PSPC1-208ENST00000635562 MBLAC2Q68D91 279 aa3.77□□□□□ -1.81
PSPC1-208ENST00000635562 LIPIQ6XZB0 460 aa3.77□□□□□ -1.81
PSPC1-208ENST00000635562 KRT26Q7Z3Y9 468 aa3.77□□□□□ -1.81
PSPC1-208ENST00000635562 FGD2Q7Z6J4 655 aa3.77□□□□□ -1.81
PSPC1-208ENST00000635562 SAPCD2Q86UD0 394 aa3.77□□□□□ -1.81
PSPC1-208ENST00000635562 THNSL2Q86YJ6 484 aa3.77□□□□□ -1.81
PSPC1-208ENST00000635562 PPIL6Q8IXY8 311 aa3.77□□□□□ -1.81
PSPC1-208ENST00000635562 NIM1KQ8IY84 436 aa3.77□□□□□ -1.81
PSPC1-208ENST00000635562 NLGN2Q8NFZ4 835 aa3.77□□□□□ -1.81
PSPC1-208ENST00000635562 ZCRB1Q8TBF4 217 aaKnown RBP3.77□□□□□ -1.81
PSPC1-208ENST00000635562 MFSD3Q96ES6 412 aa3.77□□□□□ -1.81
PSPC1-208ENST00000635562 SCLYQ96I15 445 aa3.77□□□□□ -1.81
PSPC1-208ENST00000635562 PTCHD1Q96NR3 888 aa3.77□□□□□ -1.81
PSPC1-208ENST00000635562 IPO9Q96P70 1041 aaKnown RBP3.77□□□□□ -1.81
PSPC1-208ENST00000635562 GPR20Q99678 358 aa3.77□□□□□ -1.81
PSPC1-208ENST00000635562 ZFYVE21Q9BQ24 234 aa3.77□□□□□ -1.81
PSPC1-208ENST00000635562 SENP7Q9BQF6 1050 aa3.77□□□□□ -1.81
PSPC1-208ENST00000635562 GPR27Q9NS67 375 aa3.77□□□□□ -1.81
PSPC1-208ENST00000635562 IFT57Q9NWB7 429 aa3.77□□□□□ -1.81
PSPC1-208ENST00000635562 CLEC1BQ9P126 229 aa3.77□□□□□ -1.81
PSPC1-208ENST00000635562 GABBR1Q9UBS5 961 aa3.77□□□□□ -1.81
PSPC1-208ENST00000635562 SFMBT1Q9UHJ3 866 aa3.77□□□□□ -1.81
PSPC1-208ENST00000635562 PMF1-BGLAPU3KQ54 211 aa3.77□□□□□ -1.81
PSPC1-208ENST00000635562 TRBV23OR9-2A0A075B6M9 112 aa3.76□□□□□ -1.81
PSPC1-208ENST00000635562 GSG1L2A8MUP6 293 aa3.76□□□□□ -1.81
PSPC1-208ENST00000635562 MEFVO15553 781 aaPredicted RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms