RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 ATP6V0A1Q93050 837 aa14.96□□□□□ -0.01
LINC00339-206ENST00000634451 RNPEPQ9H4A4 650 aa14.96□□□□□ -0.01
LINC00339-206ENST00000634451 SETD4Q9NVD3 440 aa14.96□□□□□ -0.01
LINC00339-206ENST00000634451 RTEL1Q9NZ71 1219 aa14.96□□□□□ -0.01
LINC00339-206ENST00000634451 LMCD1Q9NZU5 365 aa14.96□□□□□ -0.01
LINC00339-206ENST00000634451 PIEZO1Q92508 2521 aa14.96□□□□□ -0.02
LINC00339-206ENST00000634451 C17orf102A2RUQ5 167 aa14.95□□□□□ -0.02
LINC00339-206ENST00000634451 PI4K2BG5E9Z4 385 aa14.95□□□□□ -0.02
LINC00339-206ENST00000634451 PPFIA4O75335 1185 aa14.95□□□□□ -0.02
LINC00339-206ENST00000634451 MFAP1P55081 439 aaKnown RBP14.95□□□□□ -0.02
LINC00339-206ENST00000634451 COL9A3Q14050 684 aaPredicted RBP14.95□□□□□ -0.02
LINC00339-206ENST00000634451 IMMTQ16891 758 aaKnown RBP14.95□□□□□ -0.02
LINC00339-206ENST00000634451 EPC2Q52LR7 807 aa14.95□□□□□ -0.02
LINC00339-206ENST00000634451 TCEAL5Q5H9L2 206 aa14.95□□□□□ -0.02
LINC00339-206ENST00000634451 PTCRAQ6ISU1 281 aaPredicted RBP14.95□□□□□ -0.02
LINC00339-206ENST00000634451 GJD3Q8N144 294 aa14.95□□□□□ -0.02
LINC00339-206ENST00000634451 ZBTB10Q96DT7 871 aa14.95□□□□□ -0.02
LINC00339-206ENST00000634451 OSBPL3Q9H4L5 887 aa14.95□□□□□ -0.02
LINC00339-206ENST00000634451 C5orf42Q9H799 3197 aa14.94□□□□□ -0.02
LINC00339-206ENST00000634451 H3BRB1 525 aa14.94□□□□□ -0.02
LINC00339-206ENST00000634451 GPR37L1O60883 481 aa14.94□□□□□ -0.02
LINC00339-206ENST00000634451 PARNO95453 639 aaKnown RBP14.94□□□□□ -0.02
LINC00339-206ENST00000634451 AMHP03971 560 aa14.94□□□□□ -0.02
LINC00339-206ENST00000634451 PTH1RQ03431 593 aa14.94□□□□□ -0.02
LINC00339-206ENST00000634451 GRM4Q14833 912 aa14.94□□□□□ -0.02
LINC00339-206ENST00000634451 CCDC178Q5BJE1 867 aa14.94□□□□□ -0.02
LINC00339-206ENST00000634451 RUFY4Q6ZNE9 571 aa14.94□□□□□ -0.02
LINC00339-206ENST00000634451 TICAM2Q86XR7 235 aa14.94□□□□□ -0.02
LINC00339-206ENST00000634451 KRT23Q9C075 422 aa14.94□□□□□ -0.02
LINC00339-206ENST00000634451 TUT1Q9H6E5 874 aaKnown RBP14.94□□□□□ -0.02
LINC00339-206ENST00000634451 MLXIPQ9HAP2 919 aa14.94□□□□□ -0.02
LINC00339-206ENST00000634451 HCN4Q9Y3Q4 1203 aa14.94□□□□□ -0.02
LINC00339-206ENST00000634451 INSL6Q9Y581 213 aa14.94□□□□□ -0.02
LINC00339-206ENST00000634451 COL4A6Q14031 1691 aa14.93□□□□□ -0.02
LINC00339-206ENST00000634451 GCOM1H8Y6P7 765 aaPredicted RBP14.93□□□□□ -0.02
LINC00339-206ENST00000634451 LINC00271P0C7V0 271 aa14.93□□□□□ -0.02
LINC00339-206ENST00000634451 POLR2MP0CAP2 368 aa14.93□□□□□ -0.02
LINC00339-206ENST00000634451 GSPT1P15170 499 aaKnown RBP14.93□□□□□ -0.02
LINC00339-206ENST00000634451 PDE4AP27815 886 aa14.93□□□□□ -0.02
LINC00339-206ENST00000634451 CCND2P30279 289 aa14.93□□□□□ -0.02
LINC00339-206ENST00000634451 SSTR3P32745 418 aaPredicted RBP14.93□□□□□ -0.02
LINC00339-206ENST00000634451 UTP14CQ5TAP6 766 aaKnown RBP14.93□□□□□ -0.02
LINC00339-206ENST00000634451 EP400NLQ6ZTU2 488 aa14.93□□□□□ -0.02
LINC00339-206ENST00000634451 CYFIP1Q7L576 1253 aa14.93□□□□□ -0.02
LINC00339-206ENST00000634451 EXOC6Q8TAG9 804 aa14.93□□□□□ -0.02
LINC00339-206ENST00000634451 MRPL38Q96DV4 380 aaKnown RBP14.93□□□□□ -0.02
LINC00339-206ENST00000634451 YME1L1Q96TA2 773 aa14.93□□□□□ -0.02
LINC00339-206ENST00000634451 GPR20Q99678 358 aa14.93□□□□□ -0.02
LINC00339-206ENST00000634451 MAF1Q9H063 256 aa14.93□□□□□ -0.02
LINC00339-206ENST00000634451 RIOX1Q9H6W3 641 aa14.93□□□□□ -0.02
LINC00339-206ENST00000634451 GRXCR2A6NFK2 248 aa14.92□□□□□ -0.02
LINC00339-206ENST00000634451 EFCAB14O75071 495 aa14.92□□□□□ -0.02
LINC00339-206ENST00000634451 CYP21A2P08686 494 aa14.92□□□□□ -0.02
LINC00339-206ENST00000634451 GTF2F1P35269 517 aaKnown RBP eCLIP14.92□□□□□ -0.02
LINC00339-206ENST00000634451 ANTXR2P58335 489 aa14.92□□□□□ -0.02
LINC00339-206ENST00000634451 GPM6BQ13491 265 aa14.92□□□□□ -0.02
LINC00339-206ENST00000634451 CLUL1Q15846 466 aa14.92□□□□□ -0.02
LINC00339-206ENST00000634451 TMEM192Q8IY95 271 aa14.92□□□□□ -0.02
LINC00339-206ENST00000634451 NEK9Q8TD19 979 aa14.92□□□□□ -0.02
LINC00339-206ENST00000634451 LMBR1Q8WVP7 490 aa14.92□□□□□ -0.02
LINC00339-206ENST00000634451 TOP1MTQ969P6 601 aa14.92□□□□□ -0.02
LINC00339-206ENST00000634451 MYL10Q9BUA6 226 aa14.92□□□□□ -0.02
LINC00339-206ENST00000634451 FRMPD4Q14CM0 1322 aa14.92□□□□□ -0.02
LINC00339-206ENST00000634451 EMSYQ7Z589 1322 aa14.92□□□□□ -0.02
LINC00339-206ENST00000634451 CHRNA1P02708 482 aa14.91□□□□□ -0.02
LINC00339-206ENST00000634451 ADAM17P78536 824 aa14.91□□□□□ -0.02
LINC00339-206ENST00000634451 DLX2Q07687 328 aaPredicted RBP14.91□□□□□ -0.02
LINC00339-206ENST00000634451 USP17L6PQ6QN14 398 aa14.91□□□□□ -0.02
LINC00339-206ENST00000634451 BANK1Q8NDB2 785 aa14.91□□□□□ -0.02
LINC00339-206ENST00000634451 SEPT8Q92599 483 aa14.91□□□□□ -0.02
LINC00339-206ENST00000634451 INPP4AQ96PE3 977 aaPredicted RBP14.91□□□□□ -0.02
LINC00339-206ENST00000634451 IFIH1Q9BYX4 1025 aaKnown RBP14.91□□□□□ -0.02
LINC00339-206ENST00000634451 CNNM2Q9H8M5 875 aa14.91□□□□□ -0.02
LINC00339-206ENST00000634451 KAT6AQ92794 2004 aa14.91□□□□□ -0.02
LINC00339-206ENST00000634451 SPATA31C2B4DYI2 1134 aa14.9□□□□□ -0.02
LINC00339-206ENST00000634451 H3BNC9 293 aa14.9□□□□□ -0.02
LINC00339-206ENST00000634451 NOP56O00567 594 aaKnown RBP14.9□□□□□ -0.02
LINC00339-206ENST00000634451 IFIT3O14879 490 aaKnown RBP14.9□□□□□ -0.02
LINC00339-206ENST00000634451 GRM6O15303 877 aa14.9□□□□□ -0.02
LINC00339-206ENST00000634451 GHRP10912 638 aa14.9□□□□□ -0.02
LINC00339-206ENST00000634451 LTBRP36941 435 aa14.9□□□□□ -0.02
LINC00339-206ENST00000634451 ARHGAP4P98171 946 aa14.9□□□□□ -0.02
LINC00339-206ENST00000634451 TROAPQ12815 778 aa14.9□□□□□ -0.02
LINC00339-206ENST00000634451 KCNV1Q6PIU1 500 aa14.9□□□□□ -0.02
LINC00339-206ENST00000634451 METTL7BQ6UX53 244 aa14.9□□□□□ -0.02
LINC00339-206ENST00000634451 UIMC1Q96RL1 719 aa14.9□□□□□ -0.02
LINC00339-206ENST00000634451 RWDD1Q9H446 243 aaPredicted RBP14.9□□□□□ -0.02
LINC00339-206ENST00000634451 PKD2L1Q9P0L9 805 aa14.9□□□□□ -0.02
LINC00339-206ENST00000634451 CTNNA3Q9UI47 895 aa14.9□□□□□ -0.02
LINC00339-206ENST00000634451 RALGAPA2Q2PPJ7 1873 aa14.9□□□□□ -0.02
LINC00339-206ENST00000634451 ZNF318Q5VUA4 2279 aa14.9□□□□□ -0.02
LINC00339-206ENST00000634451 KIAA1671Q9BY89 1806 aa14.89□□□□□ -0.03
LINC00339-206ENST00000634451 PNMA6FA0A0J9YX94 578 aa14.89□□□□□ -0.03
LINC00339-206ENST00000634451 ATP9AO75110 1047 aa14.89□□□□□ -0.03
LINC00339-206ENST00000634451 TGFB3P10600 412 aa14.89□□□□□ -0.03
LINC00339-206ENST00000634451 MARK3P27448 753 aa14.89□□□□□ -0.03
LINC00339-206ENST00000634451 ICAM3P32942 547 aa14.89□□□□□ -0.03
LINC00339-206ENST00000634451 RAB11FIP4Q86YS3 637 aa14.89□□□□□ -0.03
LINC00339-206ENST00000634451 CMTR1Q8N1G2 835 aaKnown RBP14.89□□□□□ -0.03
LINC00339-206ENST00000634451 LINC01599Q8WXQ3 324 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms