RNA–Protein interactions for RNA: ENST00000633813.1

LINC00254-202, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-202ENST00000633813 PKN1Q16512 942 aa7.43□□□□□ -1.22
LINC00254-202ENST00000633813 SOGA3Q5TF21 947 aa7.43□□□□□ -1.22
LINC00254-202ENST00000633813 OLFML2BQ68BL8 750 aa7.43□□□□□ -1.22
LINC00254-202ENST00000633813 BTN2A2Q8WVV5 523 aa7.43□□□□□ -1.22
LINC00254-202ENST00000633813 SREK1Q8WXA9 508 aaKnown RBP7.43□□□□□ -1.22
LINC00254-202ENST00000633813 COPS5Q92905 334 aa7.43□□□□□ -1.22
LINC00254-202ENST00000633813 PPP1R16BQ96T49 567 aa7.43□□□□□ -1.22
LINC00254-202ENST00000633813 SIRPGQ9P1W8 387 aa7.43□□□□□ -1.22
LINC00254-202ENST00000633813 ACEP12821 1306 aa7.43□□□□□ -1.22
LINC00254-202ENST00000633813 BRD4O60885 1362 aaPredicted RBP7.43□□□□□ -1.22
LINC00254-202ENST00000633813 CPP00450 1065 aa7.42□□□□□ -1.22
LINC00254-202ENST00000633813 MPOP05164 745 aa7.42□□□□□ -1.22
LINC00254-202ENST00000633813 CCDC184Q52MB2 194 aa7.42□□□□□ -1.22
LINC00254-202ENST00000633813 MORC1Q86VD1 984 aa7.42□□□□□ -1.22
LINC00254-202ENST00000633813 NLGN2Q8NFZ4 835 aa7.42□□□□□ -1.22
LINC00254-202ENST00000633813 SGSM3Q96HU1 749 aa7.42□□□□□ -1.22
LINC00254-202ENST00000633813 KRTAP4-8Q9BYQ9 185 aa7.42□□□□□ -1.22
LINC00254-202ENST00000633813 PDLIM7Q9NR12 457 aa7.42□□□□□ -1.22
LINC00254-202ENST00000633813 POLR3AO14802 1390 aaPredicted RBP7.42□□□□□ -1.22
LINC00254-202ENST00000633813 TMEM94Q12767 1356 aa7.42□□□□□ -1.22
LINC00254-202ENST00000633813 EDC4Q6P2E9 1401 aaKnown RBP7.42□□□□□ -1.22
LINC00254-202ENST00000633813 HRKO00198 91 aa7.41□□□□□ -1.22
LINC00254-202ENST00000633813 ABLIM1O14639 778 aa7.41□□□□□ -1.22
LINC00254-202ENST00000633813 EFEMP2O95967 443 aa7.41□□□□□ -1.22
LINC00254-202ENST00000633813 SNRPB2P08579 225 aaKnown RBP7.41□□□□□ -1.22
LINC00254-202ENST00000633813 ATF3P18847 181 aa7.41□□□□□ -1.22
LINC00254-202ENST00000633813 PPP2R1AP30153 589 aa7.41□□□□□ -1.22
LINC00254-202ENST00000633813 ERVFRD-1P60508 538 aa7.41□□□□□ -1.22
LINC00254-202ENST00000633813 ZNF648Q5T619 568 aaPredicted RBP7.41□□□□□ -1.22
LINC00254-202ENST00000633813 IQCEQ6IPM2 695 aa7.41□□□□□ -1.22
LINC00254-202ENST00000633813 ZNF605Q86T29 641 aa7.41□□□□□ -1.22
LINC00254-202ENST00000633813 NGDNQ8NEJ9 315 aaKnown RBP7.41□□□□□ -1.22
LINC00254-202ENST00000633813 BHLHE22Q8NFJ8 381 aaPredicted RBP7.41□□□□□ -1.22
LINC00254-202ENST00000633813 PMFBP1Q8TBY8 1022 aa7.41□□□□□ -1.22
LINC00254-202ENST00000633813 LGR4Q9BXB1 951 aa7.41□□□□□ -1.22
LINC00254-202ENST00000633813 ZNF552Q9H707 407 aaPredicted RBP7.41□□□□□ -1.22
LINC00254-202ENST00000633813 ZNF335Q9H4Z2 1342 aaPredicted RBP7.41□□□□□ -1.22
LINC00254-202ENST00000633813 DCCP43146 1447 aa7.41□□□□□ -1.22
LINC00254-202ENST00000633813 CDC42BPGQ6DT37 1551 aa7.41□□□□□ -1.22
LINC00254-202ENST00000633813 PEX10O60683 326 aa7.4□□□□□ -1.22
LINC00254-202ENST00000633813 THBDP07204 575 aa7.4□□□□□ -1.22
LINC00254-202ENST00000633813 KCNJ6P48051 423 aa7.4□□□□□ -1.22
LINC00254-202ENST00000633813 MVKQ03426 396 aa7.4□□□□□ -1.22
LINC00254-202ENST00000633813 RBL2Q08999 1139 aa7.4□□□□□ -1.22
LINC00254-202ENST00000633813 MESP2Q0VG99 397 aa7.4□□□□□ -1.22
LINC00254-202ENST00000633813 SYDE1Q6ZW31 735 aaPredicted RBP7.4□□□□□ -1.22
LINC00254-202ENST00000633813 CABP7Q86V35 215 aa7.4□□□□□ -1.22
LINC00254-202ENST00000633813 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.4□□□□□ -1.22
LINC00254-202ENST00000633813 LRRC47Q8N1G4 583 aaKnown RBP7.4□□□□□ -1.22
LINC00254-202ENST00000633813 PNISRQ8TF01 805 aaKnown RBP7.4□□□□□ -1.22
LINC00254-202ENST00000633813 ZNF669Q96BR6 464 aaPredicted RBP7.4□□□□□ -1.22
LINC00254-202ENST00000633813 MMP19Q99542 508 aa7.4□□□□□ -1.22
LINC00254-202ENST00000633813 TNFRSF12AQ9NP84 129 aa7.4□□□□□ -1.22
LINC00254-202ENST00000633813 GPRC5CQ9NQ84 441 aa7.4□□□□□ -1.22
LINC00254-202ENST00000633813 CLEC1BQ9P126 229 aa7.4□□□□□ -1.22
LINC00254-202ENST00000633813 MSRB2Q9Y3D2 182 aa7.4□□□□□ -1.22
LINC00254-202ENST00000633813 TTC21BQ7Z4L5 1316 aa7.4□□□□□ -1.22
LINC00254-202ENST00000633813 USP32Q8NFA0 1604 aa7.39□□□□□ -1.23
LINC00254-202ENST00000633813 USP6P35125 1406 aa7.39□□□□□ -1.23
LINC00254-202ENST00000633813 MSH6P52701 1360 aa7.39□□□□□ -1.23
LINC00254-202ENST00000633813 TTC21AQ8NDW8 1320 aa7.39□□□□□ -1.23
LINC00254-202ENST00000633813 PDPK1O15530 556 aa7.39□□□□□ -1.23
LINC00254-202ENST00000633813 TBX1O43435 398 aa7.39□□□□□ -1.23
LINC00254-202ENST00000633813 NPHS1O60500 1241 aa7.39□□□□□ -1.23
LINC00254-202ENST00000633813 SCG5P05408 212 aa7.39□□□□□ -1.23
LINC00254-202ENST00000633813 PLS3P13797 630 aa7.39□□□□□ -1.23
LINC00254-202ENST00000633813 ECI1P42126 302 aa7.39□□□□□ -1.23
LINC00254-202ENST00000633813 PPP2R2AP63151 447 aa7.39□□□□□ -1.23
LINC00254-202ENST00000633813 HSP90AA2PQ14568 343 aaPredicted RBP7.39□□□□□ -1.23
LINC00254-202ENST00000633813 KIR3DS1Q14943 382 aa7.39□□□□□ -1.23
LINC00254-202ENST00000633813 NR1I3Q14994 352 aa7.39□□□□□ -1.23
LINC00254-202ENST00000633813 E4F1Q66K89 784 aaPredicted RBP7.39□□□□□ -1.23
LINC00254-202ENST00000633813 BICRALQ6AI39 1079 aa7.39□□□□□ -1.23
LINC00254-202ENST00000633813 CPNE8Q86YQ8 564 aa7.39□□□□□ -1.23
LINC00254-202ENST00000633813 CCDC113Q9H0I3 377 aa7.39□□□□□ -1.23
LINC00254-202ENST00000633813 FMN2Q9NZ56 1722 aa7.38□□□□□ -1.23
LINC00254-202ENST00000633813 LRRC7Q96NW7 1537 aa7.38□□□□□ -1.23
LINC00254-202ENST00000633813 SSH2Q76I76 1423 aa7.38□□□□□ -1.23
LINC00254-202ENST00000633813 A0A1W2PQU0 124 aa7.38□□□□□ -1.23
LINC00254-202ENST00000633813 CCDC85CA6NKD9 419 aa7.38□□□□□ -1.23
LINC00254-202ENST00000633813 NFIBO00712 420 aa7.38□□□□□ -1.23
LINC00254-202ENST00000633813 SEMA7AO75326 666 aa7.38□□□□□ -1.23
LINC00254-202ENST00000633813 TMEM253P0C7T8 217 aa7.38□□□□□ -1.23
LINC00254-202ENST00000633813 RASGRF1Q13972 1273 aa7.38□□□□□ -1.23
LINC00254-202ENST00000633813 RAB3GAP1Q15042 981 aa7.38□□□□□ -1.23
LINC00254-202ENST00000633813 FAM9BQ8IZU0 186 aa7.38□□□□□ -1.23
LINC00254-202ENST00000633813 COG3Q96JB2 828 aa7.38□□□□□ -1.23
LINC00254-202ENST00000633813 ORAI2Q96SN7 254 aa7.38□□□□□ -1.23
LINC00254-202ENST00000633813 NALCNQ8IZF0 1738 aa7.38□□□□□ -1.23
LINC00254-202ENST00000633813 C1orf167Q5SNV9 1468 aa7.37□□□□□ -1.23
LINC00254-202ENST00000633813 MEFVO15553 781 aaPredicted RBP7.37□□□□□ -1.23
LINC00254-202ENST00000633813 SRGAP3O43295 1099 aa7.37□□□□□ -1.23
LINC00254-202ENST00000633813 C8AP07357 584 aa7.37□□□□□ -1.23
LINC00254-202ENST00000633813 MSL3P1P0C860 447 aa7.37□□□□□ -1.23
LINC00254-202ENST00000633813 TNNT2P45379 298 aaPredicted RBP7.37□□□□□ -1.23
LINC00254-202ENST00000633813 MTHFSP49914 203 aa7.37□□□□□ -1.23
LINC00254-202ENST00000633813 GFRA1P56159 465 aa7.37□□□□□ -1.23
LINC00254-202ENST00000633813 KCNAB2Q13303 367 aa7.37□□□□□ -1.23
LINC00254-202ENST00000633813 MTERF2Q49AM1 385 aa7.37□□□□□ -1.23
LINC00254-202ENST00000633813 ACBD5Q5T8D3 534 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms