RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 DEF6Q9H4E7 631 aa8.94□□□□□ -0.98
GPC3-204ENST00000631057 MMRN2Q9H8L6 949 aa8.94□□□□□ -0.98
GPC3-204ENST00000631057 PANK4Q9NVE7 773 aa8.94□□□□□ -0.98
GPC3-204ENST00000631057 HDAC6Q9UBN7 1215 aa8.94□□□□□ -0.98
GPC3-204ENST00000631057 PCDHA12Q9UN75 941 aa8.94□□□□□ -0.98
GPC3-204ENST00000631057 COL4A3BPQ9Y5P4 624 aa8.94□□□□□ -0.98
GPC3-204ENST00000631057 ZNF646O15015 1829 aaPredicted RBP8.94□□□□□ -0.98
GPC3-204ENST00000631057 LOXHD1Q8IVV2 1947 aa8.93□□□□□ -0.98
GPC3-204ENST00000631057 SCN9AQ15858 1988 aa8.93□□□□□ -0.98
GPC3-204ENST00000631057 SLX4Q8IY92 1834 aa8.93□□□□□ -0.98
GPC3-204ENST00000631057 CYP3A7-CYP3A51PA0A087WV96 503 aa8.93□□□□□ -0.98
GPC3-204ENST00000631057 RCCD1A6NED2 376 aa8.93□□□□□ -0.98
GPC3-204ENST00000631057 AKR1B10O60218 316 aa8.93□□□□□ -0.98
GPC3-204ENST00000631057 GABBR2O75899 941 aa8.93□□□□□ -0.98
GPC3-204ENST00000631057 APBA3O96018 575 aa8.93□□□□□ -0.98
GPC3-204ENST00000631057 CYP3A7P24462 503 aa8.93□□□□□ -0.98
GPC3-204ENST00000631057 ALDH1B1P30837 517 aa8.93□□□□□ -0.98
GPC3-204ENST00000631057 SLC16A2P36021 539 aa8.93□□□□□ -0.98
GPC3-204ENST00000631057 EIF4A3P38919 411 aaKnown RBP8.93□□□□□ -0.98
GPC3-204ENST00000631057 SCNN1DP51172 638 aa8.93□□□□□ -0.98
GPC3-204ENST00000631057 KIF11P52732 1056 aa8.93□□□□□ -0.98
GPC3-204ENST00000631057 FKBP3Q00688 224 aaKnown RBP8.93□□□□□ -0.98
GPC3-204ENST00000631057 CYP27A1Q02318 531 aa8.93□□□□□ -0.98
GPC3-204ENST00000631057 AP3B2Q13367 1082 aa8.93□□□□□ -0.98
GPC3-204ENST00000631057 CCDC40Q4G0X9 1142 aa8.93□□□□□ -0.98
GPC3-204ENST00000631057 PDXDC1Q6P996 788 aa8.93□□□□□ -0.98
GPC3-204ENST00000631057 MOXD1Q6UVY6 613 aa8.93□□□□□ -0.98
GPC3-204ENST00000631057 KCTD1Q719H9 257 aa8.93□□□□□ -0.98
GPC3-204ENST00000631057 C2CD5Q86YS7 1000 aa8.93□□□□□ -0.98
GPC3-204ENST00000631057 SLFN12Q8IYM2 578 aa8.93□□□□□ -0.98
GPC3-204ENST00000631057 RUBCNQ92622 972 aa8.93□□□□□ -0.98
GPC3-204ENST00000631057 EXOC4Q96A65 974 aa8.93□□□□□ -0.98
GPC3-204ENST00000631057 ALS2CR12Q96Q35 445 aa8.93□□□□□ -0.98
GPC3-204ENST00000631057 NUDT12Q9BQG2 462 aa8.93□□□□□ -0.98
GPC3-204ENST00000631057 DHX36Q9H2U1 1008 aaKnown RBP8.93□□□□□ -0.98
GPC3-204ENST00000631057 SH2D4AQ9H788 454 aa8.93□□□□□ -0.98
GPC3-204ENST00000631057 FAM207AQ9NSI2 230 aaPredicted RBP8.93□□□□□ -0.98
GPC3-204ENST00000631057 PSD3Q9NYI0 1048 aa8.93□□□□□ -0.98
GPC3-204ENST00000631057 CALCOCO1Q9P1Z2 691 aa8.93□□□□□ -0.98
GPC3-204ENST00000631057 NYAP2Q9P242 653 aa8.93□□□□□ -0.98
GPC3-204ENST00000631057 ARHGAP20Q9P2F6 1191 aa8.93□□□□□ -0.98
GPC3-204ENST00000631057 JRKLQ9Y4A0 524 aa8.93□□□□□ -0.98
GPC3-204ENST00000631057 PCDHA13Q9Y5I0 950 aa8.93□□□□□ -0.98
GPC3-204ENST00000631057 MYH11P35749 1972 aa8.93□□□□□ -0.98
GPC3-204ENST00000631057 SSU72P8A0A1W2PR75 194 aa8.92□□□□□ -0.98
GPC3-204ENST00000631057 MACROD2A1Z1Q3 448 aa8.92□□□□□ -0.98
GPC3-204ENST00000631057 H3BQF6 201 aa8.92□□□□□ -0.98
GPC3-204ENST00000631057 TRAF5O00463 557 aa8.92□□□□□ -0.98
GPC3-204ENST00000631057 SSBP05455 408 aaKnown RBP eCLIP8.92□□□□□ -0.98
GPC3-204ENST00000631057 PLA2G4BP0C869 781 aa8.92□□□□□ -0.98
GPC3-204ENST00000631057 CRKP46108 304 aa8.92□□□□□ -0.98
GPC3-204ENST00000631057 FKBP1AP62942 108 aaKnown RBP8.92□□□□□ -0.98
GPC3-204ENST00000631057 CASP8Q14790 479 aa8.92□□□□□ -0.98
GPC3-204ENST00000631057 DOK7Q18PE1 504 aa8.92□□□□□ -0.98
GPC3-204ENST00000631057 QRICH1Q2TAL8 776 aa8.92□□□□□ -0.98
GPC3-204ENST00000631057 ZCWPW2Q504Y3 356 aa8.92□□□□□ -0.98
GPC3-204ENST00000631057 HSP90B2PQ58FF3 399 aa8.92□□□□□ -0.98
GPC3-204ENST00000631057 HAUS3Q68CZ6 603 aa8.92□□□□□ -0.98
GPC3-204ENST00000631057 APOBEC3HQ6NTF7 200 aaKnown RBP8.92□□□□□ -0.98
GPC3-204ENST00000631057 RRAGAQ7L523 313 aa8.92□□□□□ -0.98
GPC3-204ENST00000631057 CACNA2D4Q7Z3S7 1137 aa8.92□□□□□ -0.98
GPC3-204ENST00000631057 PARP9Q8IXQ6 854 aa8.92□□□□□ -0.98
GPC3-204ENST00000631057 FLAD1Q8NFF5 587 aa8.92□□□□□ -0.98
GPC3-204ENST00000631057 SYN2Q92777 582 aaPredicted RBP8.92□□□□□ -0.98
GPC3-204ENST00000631057 MKL1Q969V6 931 aa8.92□□□□□ -0.98
GPC3-204ENST00000631057 CAPZA3Q96KX2 299 aa8.92□□□□□ -0.98
GPC3-204ENST00000631057 ZDHHC15Q96MV8 337 aa8.92□□□□□ -0.98
GPC3-204ENST00000631057 MBOAT7Q96N66 472 aa8.92□□□□□ -0.98
GPC3-204ENST00000631057 MMS19Q96T76 1030 aa8.92□□□□□ -0.98
GPC3-204ENST00000631057 MRIQ9BWK5 157 aa8.92□□□□□ -0.98
GPC3-204ENST00000631057 ANO3Q9BYT9 981 aa8.92□□□□□ -0.98
GPC3-204ENST00000631057 TANGO6Q9C0B7 1094 aa8.92□□□□□ -0.98
GPC3-204ENST00000631057 VIPAS39Q9H9C1 493 aa8.92□□□□□ -0.98
GPC3-204ENST00000631057 KANSL2Q9H9L4 492 aa8.92□□□□□ -0.98
GPC3-204ENST00000631057 PDE11AQ9HCR9 933 aa8.92□□□□□ -0.98
GPC3-204ENST00000631057 KCNMB3Q9NPA1 279 aa8.92□□□□□ -0.98
GPC3-204ENST00000631057 LUC7LQ9NQ29 371 aaKnown RBP8.92□□□□□ -0.98
GPC3-204ENST00000631057 CEP72Q9P209 647 aa8.92□□□□□ -0.98
GPC3-204ENST00000631057 FAM184BQ9ULE4 1060 aa8.92□□□□□ -0.98
GPC3-204ENST00000631057 PCDHB8Q9UN66 801 aa8.92□□□□□ -0.98
GPC3-204ENST00000631057 TFR2Q9UP52 801 aa8.92□□□□□ -0.98
GPC3-204ENST00000631057 PCDHB13Q9Y5F0 798 aa8.92□□□□□ -0.98
GPC3-204ENST00000631057 PCDHA1Q9Y5I3 950 aa8.92□□□□□ -0.98
GPC3-204ENST00000631057 ERICH4A6NGS2 130 aa8.91□□□□□ -0.98
GPC3-204ENST00000631057 LRRC53A6NM62 1247 aa8.91□□□□□ -0.98
GPC3-204ENST00000631057 ZNF263O14978 683 aa8.91□□□□□ -0.98
GPC3-204ENST00000631057 EPHB6O15197 1021 aa8.91□□□□□ -0.98
GPC3-204ENST00000631057 PJA2O43164 708 aa8.91□□□□□ -0.98
GPC3-204ENST00000631057 PLEKP08567 350 aaPredicted RBP8.91□□□□□ -0.98
GPC3-204ENST00000631057 PRLRP16471 622 aa8.91□□□□□ -0.98
GPC3-204ENST00000631057 PDE6BP35913 854 aa8.91□□□□□ -0.98
GPC3-204ENST00000631057 SLC1A4P43007 532 aa8.91□□□□□ -0.98
GPC3-204ENST00000631057 MARSP56192 900 aaKnown RBP8.91□□□□□ -0.98
GPC3-204ENST00000631057 HDLBPQ00341 1268 aaKnown RBP8.91□□□□□ -0.98
GPC3-204ENST00000631057 ITIH3Q06033 890 aa8.91□□□□□ -0.98
GPC3-204ENST00000631057 LRRC41Q15345 812 aa8.91□□□□□ -0.98
GPC3-204ENST00000631057 CDC37Q16543 378 aaPredicted RBP8.91□□□□□ -0.98
GPC3-204ENST00000631057 ECM1Q16610 540 aa8.91□□□□□ -0.98
GPC3-204ENST00000631057 SLFN13Q68D06 897 aa8.91□□□□□ -0.98
GPC3-204ENST00000631057 ZNF572Q7Z3I7 529 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms