RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 MUTP22033 750 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 GCLCP48506 637 aaPredicted RBP8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 VEGFBP49765 207 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 CCNA1P78396 465 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 SPIRE1Q08AE8 756 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 DPYDQ12882 1025 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 GRB10Q13322 594 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 PPP2R5CQ13362 524 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 MTMR1Q13613 665 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 DEFB115Q30KQ5 88 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 NAALADL2Q58DX5 795 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 CT47A1Q5JQC4 288 aaPredicted RBP8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 NCAPH2Q6IBW4 605 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 POTEEQ6S8J3 1075 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 SV2BQ7L1I2 683 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 NLRX1Q86UT6 975 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 NCAPG2Q86XI2 1143 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 GRAMD1CQ8IYS0 662 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 MLKLQ8NB16 471 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 SHCBP1Q8NEM2 672 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 CYP2W1Q8TAV3 490 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 SMCR8Q8TEV9 937 aaPredicted RBP8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 BRI3BPQ8WY22 251 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 SPOCK2Q92563 424 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 ERCC4Q92889 916 aaPredicted RBP8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 CCDC47Q96A33 483 aaKnown RBP8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 ABHD8Q96I13 439 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 CDHR1Q96JP9 859 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 MPHOSPH6Q99547 160 aaKnown RBP8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 BEGAINQ9BUH8 593 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 TEKT3Q9BXF9 490 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 MOV10L1Q9BXT6 1211 aaKnown RBP8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 DNAJC25Q9H1X3 360 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 MROH8Q9H579 483 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 CBX8Q9HC52 389 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 KBTBD4Q9NVX7 518 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 WBP1LQ9NX94 342 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 RBPJLQ9UBG7 517 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 MAN1B1Q9UKM7 699 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 VAV3Q9UKW4 847 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 COLQQ9Y215 455 aaPredicted RBP8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 A0A0G2JMZ2 1700 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 RLFQ13129 1914 aa8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 TESPA1A2RU30 521 aaPredicted RBP8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 MANSC4A6NHS7 340 aaPredicted RBP8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 SMTNL1A8MU46 457 aa8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 BIN1O00499 593 aa8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 NR3C2P08235 984 aa8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 ARP10275 920 aa8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 MYCLP12524 364 aaPredicted RBP8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 ITGB5P18084 799 aa8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 ERCC3P19447 782 aa8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 RPA1P27694 616 aa8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 ZNF157P51786 506 aaPredicted RBP8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 ERVK-9P63128 1117 aa8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 ERVK-24P63145 666 aa8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 TPM4P67936 248 aa8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 MRPS9P82933 396 aaKnown RBP8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 MORC3Q14149 939 aa8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 GNPTABQ3T906 1256 aa8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 C11orf57Q6ZUT1 292 aaPredicted RBP8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 OTOP1Q7RTM1 612 aa8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 VSIG10LQ86VR7 867 aa8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 GPRC5AQ8NFJ5 357 aa8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 IL31RAQ8NI17 732 aa8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 NEK9Q8TD19 979 aa8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 LARP4BQ92615 738 aaKnown RBP8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 RAD54LQ92698 747 aa8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 GJA10Q969M2 543 aa8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 GPRASP2Q96D09 838 aa8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 PNMA5Q96PV4 448 aa8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 PARK7Q99497 189 aaKnown RBP8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 PLIN2Q99541 437 aa8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 C7orf25Q9BPX7 421 aa8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 POLR3CQ9BUI4 534 aaPredicted RBP8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 AGO4Q9HCK5 861 aaKnown RBP8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 TUFT1Q9NNX1 390 aa8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 ZCCHC17Q9NP64 241 aaKnown RBP8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 KCNH7Q9NS40 1196 aa8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 TBC1D22BQ9NU19 505 aa8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 ADD3Q9UEY8 706 aaKnown RBP8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 TCEAL9Q9UHQ7 104 aa8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 PASKQ96RG2 1323 aa8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 PARP14Q460N5 1801 aa8.45□□□□□ -1.06
PTP4A1-206ENST00000627002 LOC102724159A0A0B4J2E5 919 aa8.44□□□□□ -1.06
PTP4A1-206ENST00000627002 CCDC85CA6NKD9 419 aa8.44□□□□□ -1.06
PTP4A1-206ENST00000627002 BECN2A8MW95 431 aa8.44□□□□□ -1.06
PTP4A1-206ENST00000627002 GOLGA6L19H0YKK7 550 aa8.44□□□□□ -1.06
PTP4A1-206ENST00000627002 RPN1P04843 607 aaKnown RBP8.44□□□□□ -1.06
PTP4A1-206ENST00000627002 CYP2C8P10632 490 aa8.44□□□□□ -1.06
PTP4A1-206ENST00000627002 FCER1AP12319 257 aa8.44□□□□□ -1.06
PTP4A1-206ENST00000627002 INHBEP58166 350 aa8.44□□□□□ -1.06
PTP4A1-206ENST00000627002 MLLT1Q03111 559 aaPredicted RBP8.44□□□□□ -1.06
PTP4A1-206ENST00000627002 MKRN3Q13064 507 aaKnown RBP8.44□□□□□ -1.06
PTP4A1-206ENST00000627002 CUL4BQ13620 913 aa8.44□□□□□ -1.06
PTP4A1-206ENST00000627002 KCTD2Q14681 263 aa8.44□□□□□ -1.06
PTP4A1-206ENST00000627002 KCNB1Q14721 858 aa8.44□□□□□ -1.06
PTP4A1-206ENST00000627002 IQCB1Q15051 598 aa8.44□□□□□ -1.06
PTP4A1-206ENST00000627002 PWP2Q15269 919 aaKnown RBP8.44□□□□□ -1.06
PTP4A1-206ENST00000627002 EPHA7Q15375 998 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms