RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 IL23AQ9NPF7 189 aa25.56■■□□□ 1.68
SF1-220ENST00000626028 NOD1Q9Y239 953 aa25.56■■□□□ 1.68
SF1-220ENST00000626028 SCN5AQ14524 2016 aa25.56■■□□□ 1.68
SF1-220ENST00000626028 RFC2P35250 354 aa25.55■■□□□ 1.68
SF1-220ENST00000626028 SMAD3P84022 425 aaKnown RBP25.55■■□□□ 1.68
SF1-220ENST00000626028 FAM109BQ6ICB4 259 aaPredicted RBP25.55■■□□□ 1.68
SF1-220ENST00000626028 NIPA1Q7RTP0 329 aa25.55■■□□□ 1.68
SF1-220ENST00000626028 CAGE1Q8TC20 777 aa25.55■■□□□ 1.68
SF1-220ENST00000626028 PHKBQ93100 1093 aa25.55■■□□□ 1.68
SF1-220ENST00000626028 GPR20Q99678 358 aa25.55■■□□□ 1.68
SF1-220ENST00000626028 ANO3Q9BYT9 981 aa25.55■■□□□ 1.68
SF1-220ENST00000626028 H3BRB1 525 aa25.54■■□□□ 1.68
SF1-220ENST00000626028 CPLX1O14810 134 aa25.54■■□□□ 1.68
SF1-220ENST00000626028 ZNF286BP0CG31 522 aa25.54■■□□□ 1.68
SF1-220ENST00000626028 KCNA2P16389 499 aa25.54■■□□□ 1.68
SF1-220ENST00000626028 CCT2P78371 535 aaKnown RBP25.54■■□□□ 1.68
SF1-220ENST00000626028 PTGISQ16647 500 aa25.54■■□□□ 1.68
SF1-220ENST00000626028 MXRA8Q9BRK3 442 aa25.54■■□□□ 1.68
SF1-220ENST00000626028 SLC26A6Q9BXS9 759 aa25.54■■□□□ 1.68
SF1-220ENST00000626028 MTIF3Q9H2K0 278 aaKnown RBP25.54■■□□□ 1.68
SF1-220ENST00000626028 TUT1Q9H6E5 874 aaKnown RBP25.54■■□□□ 1.68
SF1-220ENST00000626028 PARNO95453 639 aaKnown RBP25.53■■□□□ 1.68
SF1-220ENST00000626028 CYP2C9P11712 490 aa25.53■■□□□ 1.68
SF1-220ENST00000626028 RBL2Q08999 1139 aa25.53■■□□□ 1.68
SF1-220ENST00000626028 CEP55Q53EZ4 464 aa25.53■■□□□ 1.68
SF1-220ENST00000626028 TMEM240Q5SV17 173 aa25.53■■□□□ 1.68
SF1-220ENST00000626028 REXO1Q8N1G1 1221 aaKnown RBP25.53■■□□□ 1.68
SF1-220ENST00000626028 RETREG2Q8NC44 543 aa25.53■■□□□ 1.68
SF1-220ENST00000626028 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.53■■□□□ 1.68
SF1-220ENST00000626028 WNT8AQ9H1J5 351 aa25.53■■□□□ 1.68
SF1-220ENST00000626028 NCOA5Q9HCD5 579 aaKnown RBP25.53■■□□□ 1.68
SF1-220ENST00000626028 HDAC6Q9UBN7 1215 aa25.53■■□□□ 1.68
SF1-220ENST00000626028 ZNF215Q9UL58 517 aaPredicted RBP25.53■■□□□ 1.68
SF1-220ENST00000626028 CDKL5O76039 1030 aa25.52■■□□□ 1.68
SF1-220ENST00000626028 LGALS2P05162 132 aa25.52■■□□□ 1.68
SF1-220ENST00000626028 SSRP1Q08945 709 aaKnown RBP25.52■■□□□ 1.68
SF1-220ENST00000626028 RASIP1Q5U651 963 aa25.52■■□□□ 1.68
SF1-220ENST00000626028 GDF6Q6KF10 455 aaPredicted RBP25.52■■□□□ 1.68
SF1-220ENST00000626028 C16orf59Q7L2K0 433 aa25.52■■□□□ 1.68
SF1-220ENST00000626028 UMODL1Q5DID0 1318 aa25.52■■□□□ 1.68
SF1-220ENST00000626028 DEXIO95424 95 aa25.51■■□□□ 1.67
SF1-220ENST00000626028 CYP3A4P08684 503 aa25.51■■□□□ 1.67
SF1-220ENST00000626028 CHMP4BP1P59074 171 aa25.51■■□□□ 1.67
SF1-220ENST00000626028 AFAP1L1Q8TED9 768 aa25.51■■□□□ 1.67
SF1-220ENST00000626028 CRYGNQ8WXF5 182 aa25.51■■□□□ 1.67
SF1-220ENST00000626028 ALG1Q9BT22 464 aa25.51■■□□□ 1.67
SF1-220ENST00000626028 KCNH7Q9NS40 1196 aa25.51■■□□□ 1.67
SF1-220ENST00000626028 NFASCO94856 1347 aa25.51■■□□□ 1.67
SF1-220ENST00000626028 MYH9P35579 1960 aaKnown RBP25.51■■□□□ 1.67
SF1-220ENST00000626028 MEIS1O00470 390 aa25.5■■□□□ 1.67
SF1-220ENST00000626028 HOXC8P31273 242 aa25.5■■□□□ 1.67
SF1-220ENST00000626028 CCL23P55773 120 aa25.5■■□□□ 1.67
SF1-220ENST00000626028 ARHGAP4P98171 946 aa25.5■■□□□ 1.67
SF1-220ENST00000626028 PTK7Q13308 1070 aa25.5■■□□□ 1.67
SF1-220ENST00000626028 WDR81Q562E7 1941 aa25.5■■□□□ 1.67
SF1-220ENST00000626028 SEPT1Q8WYJ6 367 aa25.5■■□□□ 1.67
SF1-220ENST00000626028 HERVK_113Q902F9 699 aa25.5■■□□□ 1.67
SF1-220ENST00000626028 CTAGE1Q96RT6 745 aa25.5■■□□□ 1.67
SF1-220ENST00000626028 BCAS3Q9H6U6 928 aa25.5■■□□□ 1.67
SF1-220ENST00000626028 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.49■■□□□ 1.67
SF1-220ENST00000626028 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.49■■□□□ 1.67
SF1-220ENST00000626028 SORBS3O60504 671 aa25.49■■□□□ 1.67
SF1-220ENST00000626028 ATP9AO75110 1047 aa25.49■■□□□ 1.67
SF1-220ENST00000626028 FGBP02675 491 aa25.49■■□□□ 1.67
SF1-220ENST00000626028 IQCF3P0C7M6 154 aa25.49■■□□□ 1.67
SF1-220ENST00000626028 GNAT1P11488 350 aa25.49■■□□□ 1.67
SF1-220ENST00000626028 ZNF365Q70YC5 407 aa25.49■■□□□ 1.67
SF1-220ENST00000626028 SLKQ9H2G2 1235 aaPredicted RBP25.49■■□□□ 1.67
SF1-220ENST00000626028 TET1Q8NFU7 2136 aa25.49■■□□□ 1.67
SF1-220ENST00000626028 TMEM265A0A087WTH1 108 aa25.48■■□□□ 1.67
SF1-220ENST00000626028 GALNT17Q6IS24 598 aa25.48■■□□□ 1.67
SF1-220ENST00000626028 SDF4Q9BRK5 362 aa25.48■■□□□ 1.67
SF1-220ENST00000626028 C22orf23Q9BZE7 217 aa25.48■■□□□ 1.67
SF1-220ENST00000626028 JPH1Q9HDC5 661 aaPredicted RBP25.48■■□□□ 1.67
SF1-220ENST00000626028 TMEM260Q9NX78 707 aa25.48■■□□□ 1.67
SF1-220ENST00000626028 GBF1Q92538 1859 aa25.48■■□□□ 1.67
SF1-220ENST00000626028 PFKFB2O60825 505 aa25.47■■□□□ 1.67
SF1-220ENST00000626028 ZNF76P36508 570 aa25.47■■□□□ 1.67
SF1-220ENST00000626028 JAKMIP3Q5VZ66 844 aa25.47■■□□□ 1.67
SF1-220ENST00000626028 DEFB123Q8N688 67 aa25.47■■□□□ 1.67
SF1-220ENST00000626028 STK36Q9NRP7 1315 aa25.46■■□□□ 1.67
SF1-220ENST00000626028 ACRP10323 421 aa25.46■■□□□ 1.67
SF1-220ENST00000626028 SELPP16109 830 aa25.46■■□□□ 1.67
SF1-220ENST00000626028 TCF7P36402 384 aaPredicted RBP25.46■■□□□ 1.67
SF1-220ENST00000626028 SETQ01105 290 aaPredicted RBP25.46■■□□□ 1.67
SF1-220ENST00000626028 SERINC5Q86VE9 423 aa25.46■■□□□ 1.67
SF1-220ENST00000626028 PGBD1Q96JS3 809 aa25.46■■□□□ 1.67
SF1-220ENST00000626028 AGO4Q9HCK5 861 aaKnown RBP25.46■■□□□ 1.67
SF1-220ENST00000626028 ERAP1Q9NZ08 941 aa25.46■■□□□ 1.67
SF1-220ENST00000626028 VPS54Q9P1Q0 977 aa25.46■■□□□ 1.67
SF1-220ENST00000626028 SLC9A2Q9UBY0 812 aa25.46■■□□□ 1.67
SF1-220ENST00000626028 EMSYQ7Z589 1322 aa25.45■■□□□ 1.66
SF1-220ENST00000626028 NRCAMQ92823 1304 aa25.45■■□□□ 1.66
SF1-220ENST00000626028 C17orf102A2RUQ5 167 aa25.45■■□□□ 1.66
SF1-220ENST00000626028 CAND2O75155 1236 aa25.45■■□□□ 1.66
SF1-220ENST00000626028 SMIM10L2AP0DMW4 78 aa25.45■■□□□ 1.66
SF1-220ENST00000626028 SMIM10L2BP0DMW5 78 aa25.45■■□□□ 1.66
SF1-220ENST00000626028 ACTN1P12814 892 aa25.45■■□□□ 1.66
SF1-220ENST00000626028 AK2P54819 239 aa25.45■■□□□ 1.66
SF1-220ENST00000626028 NLRP5P59047 1200 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms