RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 TRPC5Q9UL62 973 aaPredicted RBP12.44□□□□□ -0.42
VARS2-213ENST00000625423 KIAA1024Q9UPX6 916 aa12.44□□□□□ -0.42
VARS2-213ENST00000625423 GOLGA6BA6NDN3 693 aa12.44□□□□□ -0.42
VARS2-213ENST00000625423 BBOX1O75936 387 aa12.44□□□□□ -0.42
VARS2-213ENST00000625423 POLR2FP61218 127 aaKnown RBP12.44□□□□□ -0.42
VARS2-213ENST00000625423 KLHDC7AQ5VTJ3 777 aa12.44□□□□□ -0.42
VARS2-213ENST00000625423 SFMBT2Q5VUG0 894 aa12.44□□□□□ -0.42
VARS2-213ENST00000625423 CEP72Q9P209 647 aa12.44□□□□□ -0.42
VARS2-213ENST00000625423 FEZ2Q9UHY8 353 aaPredicted RBP12.44□□□□□ -0.42
VARS2-213ENST00000625423 USP17L15C9J2P7 530 aa12.43□□□□□ -0.42
VARS2-213ENST00000625423 USP17L13C9JLJ4 530 aa12.43□□□□□ -0.42
VARS2-213ENST00000625423 USP17L11C9JVI0 530 aa12.43□□□□□ -0.42
VARS2-213ENST00000625423 USP17L18D6R9N7 530 aa12.43□□□□□ -0.42
VARS2-213ENST00000625423 USP17L22D6RA61 530 aa12.43□□□□□ -0.42
VARS2-213ENST00000625423 USP17L17D6RBQ6 530 aa12.43□□□□□ -0.42
VARS2-213ENST00000625423 USP17L19D6RCP7 530 aa12.43□□□□□ -0.42
VARS2-213ENST00000625423 USP17L20D6RJB6 530 aa12.43□□□□□ -0.42
VARS2-213ENST00000625423 ZBTB5O15062 677 aa12.43□□□□□ -0.42
VARS2-213ENST00000625423 USP17L24Q0WX57 530 aa12.43□□□□□ -0.42
VARS2-213ENST00000625423 SLC9C1Q4G0N8 1177 aa12.43□□□□□ -0.42
VARS2-213ENST00000625423 USP17L6PQ6QN14 398 aa12.43□□□□□ -0.42
VARS2-213ENST00000625423 MS4A14Q96JA4 679 aa12.43□□□□□ -0.42
VARS2-213ENST00000625423 TRIM34Q9BYJ4 488 aa12.43□□□□□ -0.42
VARS2-213ENST00000625423 POTEB3A0JP26 581 aa12.43□□□□□ -0.42
VARS2-213ENST00000625423 POTECB2RU33 542 aa12.43□□□□□ -0.42
VARS2-213ENST00000625423 MYO1CO00159 1063 aa12.43□□□□□ -0.42
VARS2-213ENST00000625423 RAD21O60216 631 aa12.43□□□□□ -0.42
VARS2-213ENST00000625423 GYS1P13807 737 aa12.43□□□□□ -0.42
VARS2-213ENST00000625423 SHMT1P34896 483 aa12.43□□□□□ -0.42
VARS2-213ENST00000625423 PAFAH1B1P43034 410 aa12.43□□□□□ -0.42
VARS2-213ENST00000625423 SEPT2Q15019 361 aa12.43□□□□□ -0.42
VARS2-213ENST00000625423 HERC4Q5GLZ8 1057 aaPredicted RBP12.43□□□□□ -0.42
VARS2-213ENST00000625423 HAUS3Q68CZ6 603 aa12.43□□□□□ -0.42
VARS2-213ENST00000625423 FOXR2Q6PJQ5 311 aa12.43□□□□□ -0.42
VARS2-213ENST00000625423 POTEBQ6S5H4 581 aa12.43□□□□□ -0.42
VARS2-213ENST00000625423 SRLQ86TD4 932 aa12.43□□□□□ -0.42
VARS2-213ENST00000625423 MXD3Q9BW11 206 aa12.43□□□□□ -0.42
VARS2-213ENST00000625423 NT5C3AQ9H0P0 336 aa12.43□□□□□ -0.42
VARS2-213ENST00000625423 USP40Q9NVE5 1235 aa12.43□□□□□ -0.42
VARS2-213ENST00000625423 RRP15Q9Y3B9 282 aaKnown RBP12.43□□□□□ -0.42
VARS2-213ENST00000625423 LTBP4Q8N2S1 1624 aa12.43□□□□□ -0.42
VARS2-213ENST00000625423 TRIM66O15016 1216 aa12.43□□□□□ -0.42
VARS2-213ENST00000625423 PLA2G4BP0C869 781 aa12.43□□□□□ -0.42
VARS2-213ENST00000625423 HOXA7P31268 230 aaPredicted RBP12.43□□□□□ -0.42
VARS2-213ENST00000625423 DNA2P51530 1060 aa12.43□□□□□ -0.42
VARS2-213ENST00000625423 ARID5AQ03989 594 aa12.43□□□□□ -0.42
VARS2-213ENST00000625423 ENOX2Q16206 610 aaKnown RBP12.43□□□□□ -0.42
VARS2-213ENST00000625423 PLEKHA4Q9H4M7 779 aa12.43□□□□□ -0.42
VARS2-213ENST00000625423 RBM12Q9NTZ6 932 aaKnown RBP12.43□□□□□ -0.42
VARS2-213ENST00000625423 PCDHA2Q9Y5H9 948 aa12.43□□□□□ -0.42
VARS2-213ENST00000625423 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.43□□□□□ -0.42
VARS2-213ENST00000625423 SERPING1P05155 500 aa12.42□□□□□ -0.42
VARS2-213ENST00000625423 GCFC2P16383 781 aaKnown RBP12.42□□□□□ -0.42
VARS2-213ENST00000625423 SCNN1DP51172 638 aa12.42□□□□□ -0.42
VARS2-213ENST00000625423 GPBP1Q86WP2 473 aa12.42□□□□□ -0.42
VARS2-213ENST00000625423 CCDC65Q8IXS2 484 aa12.42□□□□□ -0.42
VARS2-213ENST00000625423 CERS5Q8N5B7 392 aa12.42□□□□□ -0.42
VARS2-213ENST00000625423 STIM2Q9P246 746 aa12.42□□□□□ -0.42
VARS2-213ENST00000625423 KDM3AQ9Y4C1 1321 aa12.42□□□□□ -0.42
VARS2-213ENST00000625423 RBAK-RBAKDNI3L0D1 243 aa12.42□□□□□ -0.42
VARS2-213ENST00000625423 STAT3P40763 770 aa12.42□□□□□ -0.42
VARS2-213ENST00000625423 HYIQ5T013 277 aa12.42□□□□□ -0.42
VARS2-213ENST00000625423 GPATCH4Q5T3I0 446 aaKnown RBP12.42□□□□□ -0.42
VARS2-213ENST00000625423 TRIM59Q8IWR1 403 aa12.42□□□□□ -0.42
VARS2-213ENST00000625423 C10orf67Q8IYJ2 551 aa12.42□□□□□ -0.42
VARS2-213ENST00000625423 RNF10Q8N5U6 811 aaKnown RBP12.42□□□□□ -0.42
VARS2-213ENST00000625423 SCFD1Q8WVM8 642 aa12.42□□□□□ -0.42
VARS2-213ENST00000625423 TBC1D5Q92609 795 aa12.42□□□□□ -0.42
VARS2-213ENST00000625423 CEP63Q96MT8 703 aa12.42□□□□□ -0.42
VARS2-213ENST00000625423 ZHX3Q9H4I2 956 aa12.42□□□□□ -0.42
VARS2-213ENST00000625423 TMEM51Q9NW97 253 aa12.42□□□□□ -0.42
VARS2-213ENST00000625423 NHSQ6T4R5 1651 aa12.41□□□□□ -0.42
VARS2-213ENST00000625423 RAPGEF1Q13905 1077 aa12.41□□□□□ -0.42
VARS2-213ENST00000625423 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.41□□□□□ -0.42
VARS2-213ENST00000625423 NUCKS1Q9H1E3 243 aaKnown RBP12.41□□□□□ -0.42
VARS2-213ENST00000625423 EMILIN3Q9NT22 766 aa12.41□□□□□ -0.42
VARS2-213ENST00000625423 SWAP70Q9UH65 585 aa12.41□□□□□ -0.42
VARS2-213ENST00000625423 RSPH14Q9UHP6 348 aa12.41□□□□□ -0.42
VARS2-213ENST00000625423 ATF5Q9Y2D1 282 aaPredicted RBP12.41□□□□□ -0.42
VARS2-213ENST00000625423 ATP6V0A2Q9Y487 856 aa12.41□□□□□ -0.42
VARS2-213ENST00000625423 PALMO75781 387 aa12.41□□□□□ -0.42
VARS2-213ENST00000625423 CYP11B2P19099 503 aa12.41□□□□□ -0.42
VARS2-213ENST00000625423 C8orf74Q6P047 294 aa12.41□□□□□ -0.42
VARS2-213ENST00000625423 SYN2Q92777 582 aaPredicted RBP12.41□□□□□ -0.42
VARS2-213ENST00000625423 KCTD10Q9H3F6 313 aa12.41□□□□□ -0.42
VARS2-213ENST00000625423 MYH10P35580 1976 aa12.41□□□□□ -0.42
VARS2-213ENST00000625423 GOLGA6CA6NDK9 693 aa12.41□□□□□ -0.42
VARS2-213ENST00000625423 FTCDO95954 541 aa12.41□□□□□ -0.42
VARS2-213ENST00000625423 GOLGA6DP0CG33 693 aa12.41□□□□□ -0.42
VARS2-213ENST00000625423 ADAM9Q13443 819 aa12.41□□□□□ -0.42
VARS2-213ENST00000625423 ARHGAP27Q6ZUM4 889 aa12.41□□□□□ -0.42
VARS2-213ENST00000625423 FAM133AQ8N9E0 248 aa12.41□□□□□ -0.42
VARS2-213ENST00000625423 FAM76AQ8TAV0 307 aa12.41□□□□□ -0.42
VARS2-213ENST00000625423 RUBCNQ92622 972 aa12.41□□□□□ -0.42
VARS2-213ENST00000625423 GOLGA6AQ9NYA3 693 aa12.41□□□□□ -0.42
VARS2-213ENST00000625423 SPATA31A6Q5VVP1 1343 aa12.4□□□□□ -0.42
VARS2-213ENST00000625423 MED24O75448 989 aa12.4□□□□□ -0.42
VARS2-213ENST00000625423 GNA14O95837 355 aa12.4□□□□□ -0.42
VARS2-213ENST00000625423 KRT18P05783 430 aaKnown RBP12.4□□□□□ -0.42
VARS2-213ENST00000625423 KLRC1P26715 233 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms