RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 RBM23Q86U06 439 aaKnown RBP16.37■□□□□ 0.21
SNX1-214ENST00000625244 IFNL3Q8IZI9 196 aa16.37■□□□□ 0.21
SNX1-214ENST00000625244 MIER1Q8N108 512 aa16.37■□□□□ 0.21
SNX1-214ENST00000625244 PPTC7Q8NI37 304 aa16.37■□□□□ 0.21
SNX1-214ENST00000625244 PPP2R3CQ969Q6 453 aa16.37■□□□□ 0.21
SNX1-214ENST00000625244 FRMPD2Q68DX3 1309 aaPredicted RBP16.37■□□□□ 0.21
SNX1-214ENST00000625244 PATL2C9JE40 543 aaKnown RBP16.36■□□□□ 0.21
SNX1-214ENST00000625244 M0R2C6 588 aa16.36■□□□□ 0.21
SNX1-214ENST00000625244 PPP4R3BQ5MIZ7 849 aa16.36■□□□□ 0.21
SNX1-214ENST00000625244 DGLUCYQ7Z3D6 616 aa16.36■□□□□ 0.21
SNX1-214ENST00000625244 PIAS4Q8N2W9 510 aaPredicted RBP16.36■□□□□ 0.21
SNX1-214ENST00000625244 SPPL3Q8TCT6 385 aa16.36■□□□□ 0.21
SNX1-214ENST00000625244 SUSD6Q92537 303 aa16.36■□□□□ 0.21
SNX1-214ENST00000625244 APPBP2Q92624 585 aa16.36■□□□□ 0.21
SNX1-214ENST00000625244 ATP6V0A1Q93050 837 aa16.36■□□□□ 0.21
SNX1-214ENST00000625244 CNTNAP3BQ96NU0 1288 aa16.36■□□□□ 0.21
SNX1-214ENST00000625244 PLVAPQ9BX97 442 aa16.36■□□□□ 0.21
SNX1-214ENST00000625244 CNTNAP3Q9BZ76 1288 aa16.36■□□□□ 0.21
SNX1-214ENST00000625244 GPCPD1Q9NPB8 672 aa16.36■□□□□ 0.21
SNX1-214ENST00000625244 CHD8Q9HCK8 2581 aa16.35■□□□□ 0.21
SNX1-214ENST00000625244 TREHO43280 583 aa16.35■□□□□ 0.21
SNX1-214ENST00000625244 ITGB1P05556 798 aa16.35■□□□□ 0.21
SNX1-214ENST00000625244 HOXD8P13378 290 aaPredicted RBP16.35■□□□□ 0.21
SNX1-214ENST00000625244 ATF7P17544 494 aaPredicted RBP16.35■□□□□ 0.21
SNX1-214ENST00000625244 GNAT2P19087 354 aa16.35■□□□□ 0.21
SNX1-214ENST00000625244 NOVP48745 357 aa16.35■□□□□ 0.21
SNX1-214ENST00000625244 RBM10P98175 930 aaKnown RBP16.35■□□□□ 0.21
SNX1-214ENST00000625244 PPARAQ07869 468 aa16.35■□□□□ 0.21
SNX1-214ENST00000625244 LAMC2Q13753 1193 aa16.35■□□□□ 0.21
SNX1-214ENST00000625244 BTG3Q14201 252 aaPredicted RBP16.35■□□□□ 0.21
SNX1-214ENST00000625244 MCTP2Q6DN12 878 aa16.35■□□□□ 0.21
SNX1-214ENST00000625244 ZBTB33Q86T24 672 aa16.35■□□□□ 0.21
SNX1-214ENST00000625244 TBC1D5Q92609 795 aa16.35■□□□□ 0.21
SNX1-214ENST00000625244 APBB2Q92870 758 aa16.35■□□□□ 0.21
SNX1-214ENST00000625244 TAAR1Q96RJ0 339 aa16.35■□□□□ 0.21
SNX1-214ENST00000625244 COL20A1Q9P218 1284 aa16.35■□□□□ 0.21
SNX1-214ENST00000625244 PCDHGC5Q9Y5F6 944 aa16.35■□□□□ 0.21
SNX1-214ENST00000625244 SPTBN2O15020 2390 aa16.34■□□□□ 0.21
SNX1-214ENST00000625244 C17orf102A2RUQ5 167 aa16.34■□□□□ 0.21
SNX1-214ENST00000625244 TSPY2A6NKD2 308 aa16.34■□□□□ 0.21
SNX1-214ENST00000625244 SORBS3O60504 671 aa16.34■□□□□ 0.21
SNX1-214ENST00000625244 SLC3A2P08195 630 aaKnown RBP16.34■□□□□ 0.21
SNX1-214ENST00000625244 HOXC8P31273 242 aa16.34■□□□□ 0.21
SNX1-214ENST00000625244 STXBP2Q15833 593 aa16.34■□□□□ 0.21
SNX1-214ENST00000625244 RGS22Q8NE09 1264 aa16.34■□□□□ 0.21
SNX1-214ENST00000625244 P2RX5Q93086 422 aa16.34■□□□□ 0.21
SNX1-214ENST00000625244 ZNF689Q96CS4 500 aaPredicted RBP16.34■□□□□ 0.21
SNX1-214ENST00000625244 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.34■□□□□ 0.21
SNX1-214ENST00000625244 RNF113AO15541 343 aaKnown RBP16.33■□□□□ 0.2
SNX1-214ENST00000625244 PPFIA4O75335 1185 aa16.33■□□□□ 0.2
SNX1-214ENST00000625244 SP100P23497 879 aaPredicted RBP16.33■□□□□ 0.2
SNX1-214ENST00000625244 HSDL1Q3SXM5 330 aa16.33■□□□□ 0.2
SNX1-214ENST00000625244 USH1GQ495M9 461 aa16.33■□□□□ 0.2
SNX1-214ENST00000625244 KREMEN2Q8NCW0 462 aa16.33■□□□□ 0.2
SNX1-214ENST00000625244 VN1R2Q8NFZ6 395 aa16.33■□□□□ 0.2
SNX1-214ENST00000625244 SYTL5Q8TDW5 730 aaPredicted RBP16.33■□□□□ 0.2
SNX1-214ENST00000625244 NSUN6Q8TEA1 469 aaKnown RBP16.33■□□□□ 0.2
SNX1-214ENST00000625244 POF1BQ8WVV4 589 aa16.33■□□□□ 0.2
SNX1-214ENST00000625244 C16orf70Q9BSU1 422 aa16.33■□□□□ 0.2
SNX1-214ENST00000625244 PNMA2Q9UL42 364 aa16.33■□□□□ 0.2
SNX1-214ENST00000625244 MRVI1Q9Y6F6 885 aa16.33■□□□□ 0.2
SNX1-214ENST00000625244 MRPL42Q9Y6G3 142 aaKnown RBP16.33■□□□□ 0.2
SNX1-214ENST00000625244 BAHCC1Q9P281 2608 aa16.33■□□□□ 0.2
SNX1-214ENST00000625244 WDR19Q8NEZ3 1342 aa16.33■□□□□ 0.2
SNX1-214ENST00000625244 PER2O15055 1255 aa16.32■□□□□ 0.2
SNX1-214ENST00000625244 CAND2O75155 1236 aa16.32■□□□□ 0.2
SNX1-214ENST00000625244 SMIM10L2AP0DMW4 78 aa16.32■□□□□ 0.2
SNX1-214ENST00000625244 SMIM10L2BP0DMW5 78 aa16.32■□□□□ 0.2
SNX1-214ENST00000625244 SIRT2Q8IXJ6 389 aa16.32■□□□□ 0.2
SNX1-214ENST00000625244 KBTBD3Q8NAB2 608 aa16.32■□□□□ 0.2
SNX1-214ENST00000625244 KLHL23Q8NBE8 558 aa16.32■□□□□ 0.2
SNX1-214ENST00000625244 IWS1Q96ST2 819 aa16.32■□□□□ 0.2
SNX1-214ENST00000625244 SMOC2Q9H3U7 446 aa16.32■□□□□ 0.2
SNX1-214ENST00000625244 ENPP3O14638 875 aa16.31■□□□□ 0.2
SNX1-214ENST00000625244 RAB11FIP3O75154 756 aa16.31■□□□□ 0.2
SNX1-214ENST00000625244 EIF3JO75822 258 aaKnown RBP16.31■□□□□ 0.2
SNX1-214ENST00000625244 BRD1O95696 1058 aa16.31■□□□□ 0.2
SNX1-214ENST00000625244 NAALADL2Q58DX5 795 aa16.31■□□□□ 0.2
SNX1-214ENST00000625244 MYSM1Q5VVJ2 828 aa16.31■□□□□ 0.2
SNX1-214ENST00000625244 ASTLQ6HA08 431 aaPredicted RBP16.31■□□□□ 0.2
SNX1-214ENST00000625244 ATP8B4Q8TF62 1192 aa16.31■□□□□ 0.2
SNX1-214ENST00000625244 SPATA33Q96N06 139 aa16.31■□□□□ 0.2
SNX1-214ENST00000625244 RMDN3Q96TC7 470 aa16.31■□□□□ 0.2
SNX1-214ENST00000625244 NACAP1Q9BZK3 213 aa16.31■□□□□ 0.2
SNX1-214ENST00000625244 RNPEPQ9H4A4 650 aa16.31■□□□□ 0.2
SNX1-214ENST00000625244 TLE6Q9H808 572 aa16.31■□□□□ 0.2
SNX1-214ENST00000625244 KIAA1217Q5T5P2 1943 aa16.3■□□□□ 0.2
SNX1-214ENST00000625244 RANBP6O60518 1105 aaKnown RBP16.3■□□□□ 0.2
SNX1-214ENST00000625244 DGKIO75912 1065 aa16.3■□□□□ 0.2
SNX1-214ENST00000625244 CTDSPL2Q05D32 466 aa16.3■□□□□ 0.2
SNX1-214ENST00000625244 FAM26DQ5JW98 314 aa16.3■□□□□ 0.2
SNX1-214ENST00000625244 SEC62Q99442 399 aaKnown RBP16.3■□□□□ 0.2
SNX1-214ENST00000625244 TMEM47Q9BQJ4 181 aa16.3■□□□□ 0.2
SNX1-214ENST00000625244 NAPBQ9H115 298 aa16.3■□□□□ 0.2
SNX1-214ENST00000625244 S1PR5Q9H228 398 aa16.3■□□□□ 0.2
SNX1-214ENST00000625244 H3BRB1 525 aa16.29■□□□□ 0.2
SNX1-214ENST00000625244 CHRNA1P02708 482 aa16.29■□□□□ 0.2
SNX1-214ENST00000625244 ARP10275 920 aa16.29■□□□□ 0.2
SNX1-214ENST00000625244 PDHBP11177 359 aa16.29■□□□□ 0.2
SNX1-214ENST00000625244 EIF2AK2P19525 551 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms