RNA–Protein interactions for RNA: ENST00000624069.3

RPL13A-214, Transcript of ribosomal protein L13a, humanhuman

TSL 1 (best)

Gene RPL13A, Length 1,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-214ENST00000624069 DNERQ8NFT8 737 aa17.25■□□□□ 0.35
RPL13A-214ENST00000624069 SYTL5Q8TDW5 730 aaPredicted RBP17.25■□□□□ 0.35
RPL13A-214ENST00000624069 TBC1D5Q92609 795 aa17.25■□□□□ 0.35
RPL13A-214ENST00000624069 CUL5Q93034 780 aa17.25■□□□□ 0.35
RPL13A-214ENST00000624069 PURBQ96QR8 312 aaKnown RBP17.25■□□□□ 0.35
RPL13A-214ENST00000624069 SLC9A7Q96T83 725 aa17.25■□□□□ 0.35
RPL13A-214ENST00000624069 MPHOSPH6Q99547 160 aaKnown RBP17.25■□□□□ 0.35
RPL13A-214ENST00000624069 AP5M1Q9H0R1 490 aa17.25■□□□□ 0.35
RPL13A-214ENST00000624069 MAP3K20Q9NYL2 800 aaKnown RBP17.25■□□□□ 0.35
RPL13A-214ENST00000624069 LRRC37A2A6NM11 1700 aa17.24■□□□□ 0.35
RPL13A-214ENST00000624069 MCM3APO60318 1980 aa17.24■□□□□ 0.35
RPL13A-214ENST00000624069 LOC102724159A0A0B4J2E5 919 aa17.24■□□□□ 0.35
RPL13A-214ENST00000624069 ZEB2O60315 1214 aa17.24■□□□□ 0.35
RPL13A-214ENST00000624069 CYP2C9P11712 490 aa17.24■□□□□ 0.35
RPL13A-214ENST00000624069 HOXA13P31271 388 aaPredicted RBP17.24■□□□□ 0.35
RPL13A-214ENST00000624069 PWP2Q15269 919 aaKnown RBP17.24■□□□□ 0.35
RPL13A-214ENST00000624069 HERC6Q8IVU3 1022 aa17.24■□□□□ 0.35
RPL13A-214ENST00000624069 GJD3Q8N144 294 aa17.24■□□□□ 0.35
RPL13A-214ENST00000624069 NECAB1Q8N987 351 aa17.24■□□□□ 0.35
RPL13A-214ENST00000624069 TRMT13Q9NUP7 481 aaKnown RBP17.24■□□□□ 0.35
RPL13A-214ENST00000624069 BARHL2Q9NY43 387 aa17.24■□□□□ 0.35
RPL13A-214ENST00000624069 B4DLN1 442 aa17.23■□□□□ 0.35
RPL13A-214ENST00000624069 STXBP3O00186 592 aa17.23■□□□□ 0.35
RPL13A-214ENST00000624069 SUPT20HL2P0C7V6 817 aa17.23■□□□□ 0.35
RPL13A-214ENST00000624069 MRPL12P52815 198 aaKnown RBP17.23■□□□□ 0.35
RPL13A-214ENST00000624069 TMEM63BQ5T3F8 832 aa17.23■□□□□ 0.35
RPL13A-214ENST00000624069 FAM178BQ8IXR5 827 aa17.23■□□□□ 0.35
RPL13A-214ENST00000624069 SMARCC2Q8TAQ2 1214 aa17.23■□□□□ 0.35
RPL13A-214ENST00000624069 CCDC12Q8WUD4 166 aaPredicted RBP17.23■□□□□ 0.35
RPL13A-214ENST00000624069 ZSCAN31Q96LW9 406 aaPredicted RBP17.23■□□□□ 0.35
RPL13A-214ENST00000624069 PSTPIP2Q9H939 334 aa17.23■□□□□ 0.35
RPL13A-214ENST00000624069 PDGFCQ9NRA1 345 aa17.23■□□□□ 0.35
RPL13A-214ENST00000624069 SH2B1Q9NRF2 756 aaPredicted RBP17.23■□□□□ 0.35
RPL13A-214ENST00000624069 LMCD1Q9NZU5 365 aa17.23■□□□□ 0.35
RPL13A-214ENST00000624069 COL20A1Q9P218 1284 aa17.23■□□□□ 0.35
RPL13A-214ENST00000624069 Q9Y3F1 56 aa17.23■□□□□ 0.35
RPL13A-214ENST00000624069 STK36Q9NRP7 1315 aa17.22■□□□□ 0.35
RPL13A-214ENST00000624069 REV3LO60673 3130 aa17.22■□□□□ 0.35
RPL13A-214ENST00000624069 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.22■□□□□ 0.35
RPL13A-214ENST00000624069 KIF28PB7ZC32 967 aa17.22■□□□□ 0.35
RPL13A-214ENST00000624069 DEXIO95424 95 aa17.22■□□□□ 0.35
RPL13A-214ENST00000624069 ACTN1P12814 892 aa17.22■□□□□ 0.35
RPL13A-214ENST00000624069 ADCY7P51828 1080 aa17.22■□□□□ 0.35
RPL13A-214ENST00000624069 NHLH1Q02575 133 aa17.22■□□□□ 0.35
RPL13A-214ENST00000624069 PKN1Q16512 942 aa17.22■□□□□ 0.35
RPL13A-214ENST00000624069 IQSEC1Q6DN90 963 aa17.22■□□□□ 0.35
RPL13A-214ENST00000624069 TAPT1Q6NXT6 567 aa17.22■□□□□ 0.35
RPL13A-214ENST00000624069 FCHSD1Q86WN1 690 aa17.22■□□□□ 0.35
RPL13A-214ENST00000624069 CCDC148Q8NFR7 591 aa17.22■□□□□ 0.35
RPL13A-214ENST00000624069 NSUN6Q8TEA1 469 aaKnown RBP17.22■□□□□ 0.35
RPL13A-214ENST00000624069 RMDN3Q96TC7 470 aa17.22■□□□□ 0.35
RPL13A-214ENST00000624069 BRWD1Q9NSI6 2320 aa17.22■□□□□ 0.35
RPL13A-214ENST00000624069 PDE4DQ08499 809 aa17.21■□□□□ 0.35
RPL13A-214ENST00000624069 ARHGEF16Q5VV41 709 aa17.21■□□□□ 0.35
RPL13A-214ENST00000624069 TYW1BQ6NUM6 668 aa17.21■□□□□ 0.35
RPL13A-214ENST00000624069 TAAR1Q96RJ0 339 aa17.21■□□□□ 0.35
RPL13A-214ENST00000624069 GLT8D2Q9H1C3 349 aa17.21■□□□□ 0.35
RPL13A-214ENST00000624069 DDX49Q9Y6V7 483 aaKnown RBP17.21■□□□□ 0.35
RPL13A-214ENST00000624069 ESYT2A0FGR8 921 aa17.2■□□□□ 0.34
RPL13A-214ENST00000624069 PIK3CDO00329 1044 aa17.2■□□□□ 0.34
RPL13A-214ENST00000624069 EIF2AK2P19525 551 aaKnown RBP17.2■□□□□ 0.34
RPL13A-214ENST00000624069 RFC2P35250 354 aa17.2■□□□□ 0.34
RPL13A-214ENST00000624069 MCM2P49736 904 aa17.2■□□□□ 0.34
RPL13A-214ENST00000624069 USP17L6PQ6QN14 398 aa17.2■□□□□ 0.34
RPL13A-214ENST00000624069 TEX2Q8IWB9 1127 aa17.2■□□□□ 0.34
RPL13A-214ENST00000624069 CCDC83Q8IWF9 413 aa17.2■□□□□ 0.34
RPL13A-214ENST00000624069 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.2■□□□□ 0.34
RPL13A-214ENST00000624069 MORC4Q8TE76 937 aa17.2■□□□□ 0.34
RPL13A-214ENST00000624069 UIMC1Q96RL1 719 aa17.2■□□□□ 0.34
RPL13A-214ENST00000624069 UBE2ZQ9H832 354 aaPredicted RBP17.2■□□□□ 0.34
RPL13A-214ENST00000624069 RIC8AQ9NPQ8 531 aa17.2■□□□□ 0.34
RPL13A-214ENST00000624069 PXMP2Q9NR77 195 aa17.2■□□□□ 0.34
RPL13A-214ENST00000624069 SMCO2A6NFE2 343 aa17.19■□□□□ 0.34
RPL13A-214ENST00000624069 MEIS2O14770 477 aa17.19■□□□□ 0.34
RPL13A-214ENST00000624069 CTDNEP1O95476 244 aa17.19■□□□□ 0.34
RPL13A-214ENST00000624069 IQCF3P0C7M6 154 aa17.19■□□□□ 0.34
RPL13A-214ENST00000624069 ALADP13716 330 aa17.19■□□□□ 0.34
RPL13A-214ENST00000624069 EDNRBP24530 442 aa17.19■□□□□ 0.34
RPL13A-214ENST00000624069 ST3GAL1Q11201 340 aa17.19■□□□□ 0.34
RPL13A-214ENST00000624069 UBE2SQ16763 222 aa17.19■□□□□ 0.34
RPL13A-214ENST00000624069 LEXMQ3ZCV2 418 aa17.19■□□□□ 0.34
RPL13A-214ENST00000624069 FBXO16Q8IX29 292 aaPredicted RBP17.19■□□□□ 0.34
RPL13A-214ENST00000624069 NSUN7Q8NE18 718 aaKnown RBP17.19■□□□□ 0.34
RPL13A-214ENST00000624069 FBXL18Q96ME1 805 aa17.19■□□□□ 0.34
RPL13A-214ENST00000624069 IWS1Q96ST2 819 aa17.19■□□□□ 0.34
RPL13A-214ENST00000624069 C6orf50Q9HD87 102 aa17.19■□□□□ 0.34
RPL13A-214ENST00000624069 VTA1Q9NP79 307 aa17.19■□□□□ 0.34
RPL13A-214ENST00000624069 VPS54Q9P1Q0 977 aa17.19■□□□□ 0.34
RPL13A-214ENST00000624069 ORC3Q9UBD5 711 aaPredicted RBP17.19■□□□□ 0.34
RPL13A-214ENST00000624069 LCHNA4D1U4 455 aa17.18■□□□□ 0.34
RPL13A-214ENST00000624069 SPDYE3A6NKU9 549 aa17.18■□□□□ 0.34
RPL13A-214ENST00000624069 CD2BP2O95400 341 aaKnown RBP17.18■□□□□ 0.34
RPL13A-214ENST00000624069 EEPD1Q7L9B9 569 aa17.18■□□□□ 0.34
RPL13A-214ENST00000624069 GDPD5Q8WTR4 605 aa17.18■□□□□ 0.34
RPL13A-214ENST00000624069 WASF1Q92558 559 aa17.18■□□□□ 0.34
RPL13A-214ENST00000624069 PDCD2LQ9BRP1 358 aa17.18■□□□□ 0.34
RPL13A-214ENST00000624069 FTOQ9C0B1 505 aaKnown RBP eCLIP17.18■□□□□ 0.341e-12■■□□□ 11.7
RPL13A-214ENST00000624069 KCNH6Q9H252 994 aa17.18■□□□□ 0.34
RPL13A-214ENST00000624069 EHMT1Q9H9B1 1298 aa17.18■□□□□ 0.34
RPL13A-214ENST00000624069 SH3GLB2Q9NR46 395 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms