RNA–Protein interactions for RNA: ENST00000622259.4

SNX12-206, Transcript of sorting nexin 12, humanhuman

TSL 5 BASIC

Gene SNX12, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-206ENST00000622259 ITPRIPQ8IWB1 547 aa17.16■□□□□ 0.34
SNX12-206ENST00000622259 SPPL3Q8TCT6 385 aa17.16■□□□□ 0.34
SNX12-206ENST00000622259 TBC1D5Q92609 795 aa17.16■□□□□ 0.34
SNX12-206ENST00000622259 KIF1BPQ96EK5 621 aa17.16■□□□□ 0.34
SNX12-206ENST00000622259 SMOC2Q9H3U7 446 aa17.16■□□□□ 0.34
SNX12-206ENST00000622259 FRMPD2Q68DX3 1309 aaPredicted RBP17.16■□□□□ 0.34
SNX12-206ENST00000622259 KIAA1671Q9BY89 1806 aa17.15■□□□□ 0.34
SNX12-206ENST00000622259 TREHO43280 583 aa17.15■□□□□ 0.34
SNX12-206ENST00000622259 ITGB1P05556 798 aa17.15■□□□□ 0.34
SNX12-206ENST00000622259 SP100P23497 879 aaPredicted RBP17.15■□□□□ 0.34
SNX12-206ENST00000622259 HSP90AB4PQ58FF6 505 aa17.15■□□□□ 0.34
SNX12-206ENST00000622259 ZSCAN25Q6NSZ9 544 aa17.15■□□□□ 0.34
SNX12-206ENST00000622259 IFNL3Q8IZI9 196 aa17.15■□□□□ 0.34
SNX12-206ENST00000622259 VN1R2Q8NFZ6 395 aa17.15■□□□□ 0.34
SNX12-206ENST00000622259 PPTC7Q8NI37 304 aa17.15■□□□□ 0.34
SNX12-206ENST00000622259 EMID1Q96A84 441 aaPredicted RBP17.15■□□□□ 0.34
SNX12-206ENST00000622259 ZNF689Q96CS4 500 aaPredicted RBP17.15■□□□□ 0.34
SNX12-206ENST00000622259 SPTBN2O15020 2390 aa17.14■□□□□ 0.33
SNX12-206ENST00000622259 BAHCC1Q9P281 2608 aa17.14■□□□□ 0.33
SNX12-206ENST00000622259 M0R2C6 588 aa17.14■□□□□ 0.33
SNX12-206ENST00000622259 GPAA1O43292 621 aa17.14■□□□□ 0.33
SNX12-206ENST00000622259 SORBS3O60504 671 aa17.14■□□□□ 0.33
SNX12-206ENST00000622259 ATF7P17544 494 aaPredicted RBP17.14■□□□□ 0.33
SNX12-206ENST00000622259 ZBTB33Q86T24 672 aa17.14■□□□□ 0.33
SNX12-206ENST00000622259 DCAF4Q8WV16 495 aa17.14■□□□□ 0.33
SNX12-206ENST00000622259 ATP6V0A1Q93050 837 aa17.14■□□□□ 0.33
SNX12-206ENST00000622259 YTHDC1Q96MU7 727 aaKnown RBP17.14■□□□□ 0.33
SNX12-206ENST00000622259 TAAR1Q96RJ0 339 aa17.14■□□□□ 0.33
SNX12-206ENST00000622259 GPCPD1Q9NPB8 672 aa17.14■□□□□ 0.33
SNX12-206ENST00000622259 COL20A1Q9P218 1284 aa17.14■□□□□ 0.33
SNX12-206ENST00000622259 FRYLO94915 3013 aa17.14■□□□□ 0.33
SNX12-206ENST00000622259 BRD1O95696 1058 aa17.13■□□□□ 0.33
SNX12-206ENST00000622259 APPP05067 770 aa17.13■□□□□ 0.33
SNX12-206ENST00000622259 HOXD8P13378 290 aaPredicted RBP17.13■□□□□ 0.33
SNX12-206ENST00000622259 HOXC8P31273 242 aa17.13■□□□□ 0.33
SNX12-206ENST00000622259 BTG3Q14201 252 aaPredicted RBP17.13■□□□□ 0.33
SNX12-206ENST00000622259 MCTP2Q6DN12 878 aa17.13■□□□□ 0.33
SNX12-206ENST00000622259 KREMEN2Q8NCW0 462 aa17.13■□□□□ 0.33
SNX12-206ENST00000622259 POF1BQ8WVV4 589 aa17.13■□□□□ 0.33
SNX12-206ENST00000622259 PPP2R3CQ969Q6 453 aa17.13■□□□□ 0.33
SNX12-206ENST00000622259 PLVAPQ9BX97 442 aa17.13■□□□□ 0.33
SNX12-206ENST00000622259 MRPL42Q9Y6G3 142 aaKnown RBP17.13■□□□□ 0.33
SNX12-206ENST00000622259 C17orf102A2RUQ5 167 aa17.12■□□□□ 0.33
SNX12-206ENST00000622259 B4DLN1 442 aa17.12■□□□□ 0.33
SNX12-206ENST00000622259 PER2O15055 1255 aa17.12■□□□□ 0.33
SNX12-206ENST00000622259 NOVP48745 357 aa17.12■□□□□ 0.33
SNX12-206ENST00000622259 MRPL12P52815 198 aaKnown RBP17.12■□□□□ 0.33
SNX12-206ENST00000622259 HSDL1Q3SXM5 330 aa17.12■□□□□ 0.33
SNX12-206ENST00000622259 ATP8B4Q8TF62 1192 aa17.12■□□□□ 0.33
SNX12-206ENST00000622259 APPBP2Q92624 585 aa17.12■□□□□ 0.33
SNX12-206ENST00000622259 APBB2Q92870 758 aa17.12■□□□□ 0.33
SNX12-206ENST00000622259 P2RX5Q93086 422 aa17.12■□□□□ 0.33
SNX12-206ENST00000622259 C16orf70Q9BSU1 422 aa17.12■□□□□ 0.33
SNX12-206ENST00000622259 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.12■□□□□ 0.33
SNX12-206ENST00000622259 TTC3P53804 2025 aa17.11■□□□□ 0.33
SNX12-206ENST00000622259 CHD6Q8TD26 2715 aa17.11■□□□□ 0.33
SNX12-206ENST00000622259 PATL2C9JE40 543 aaKnown RBP17.11■□□□□ 0.33
SNX12-206ENST00000622259 PPARAQ07869 468 aa17.11■□□□□ 0.33
SNX12-206ENST00000622259 LAMC2Q13753 1193 aa17.11■□□□□ 0.33
SNX12-206ENST00000622259 ASTLQ6HA08 431 aaPredicted RBP17.11■□□□□ 0.33
SNX12-206ENST00000622259 KLHL23Q8NBE8 558 aa17.11■□□□□ 0.33
SNX12-206ENST00000622259 S1PR5Q9H228 398 aa17.11■□□□□ 0.33
SNX12-206ENST00000622259 RNPEPQ9H4A4 650 aa17.11■□□□□ 0.33
SNX12-206ENST00000622259 CDH22Q9UJ99 828 aa17.11■□□□□ 0.33
SNX12-206ENST00000622259 MAP1BP46821 2468 aaKnown RBP17.1■□□□□ 0.33
SNX12-206ENST00000622259 PLXNA4Q9HCM2 1894 aa17.1■□□□□ 0.33
SNX12-206ENST00000622259 TSPY2A6NKD2 308 aa17.1■□□□□ 0.33
SNX12-206ENST00000622259 STXBP2Q15833 593 aa17.1■□□□□ 0.33
SNX12-206ENST00000622259 USH1GQ495M9 461 aa17.1■□□□□ 0.33
SNX12-206ENST00000622259 KIAA2013Q8IYS2 634 aa17.1■□□□□ 0.33
SNX12-206ENST00000622259 SYTL5Q8TDW5 730 aaPredicted RBP17.1■□□□□ 0.33
SNX12-206ENST00000622259 SUPT16HQ9Y5B9 1047 aaKnown RBP17.1■□□□□ 0.33
SNX12-206ENST00000622259 MRVI1Q9Y6F6 885 aa17.1■□□□□ 0.33
SNX12-206ENST00000622259 ENPP3O14638 875 aa17.09■□□□□ 0.33
SNX12-206ENST00000622259 DGKIO75912 1065 aa17.09■□□□□ 0.33
SNX12-206ENST00000622259 SMIM10L2AP0DMW4 78 aa17.09■□□□□ 0.33
SNX12-206ENST00000622259 SMIM10L2BP0DMW5 78 aa17.09■□□□□ 0.33
SNX12-206ENST00000622259 GNAT2P19087 354 aa17.09■□□□□ 0.33
SNX12-206ENST00000622259 MYSM1Q5VVJ2 828 aa17.09■□□□□ 0.33
SNX12-206ENST00000622259 FTSJ3Q8IY81 847 aaKnown RBP17.09■□□□□ 0.33
SNX12-206ENST00000622259 APOL5Q9BWW9 433 aa17.09■□□□□ 0.33
SNX12-206ENST00000622259 WDR19Q8NEZ3 1342 aa17.09■□□□□ 0.33
SNX12-206ENST00000622259 OTOGLQ3ZCN5 2332 aa17.08■□□□□ 0.33
SNX12-206ENST00000622259 CAND2O75155 1236 aa17.08■□□□□ 0.32
SNX12-206ENST00000622259 PPFIA4O75335 1185 aa17.08■□□□□ 0.32
SNX12-206ENST00000622259 GHRP10912 638 aa17.08■□□□□ 0.32
SNX12-206ENST00000622259 EIF2AK2P19525 551 aaKnown RBP17.08■□□□□ 0.32
SNX12-206ENST00000622259 CTDSPL2Q05D32 466 aa17.08■□□□□ 0.32
SNX12-206ENST00000622259 FAM26DQ5JW98 314 aa17.08■□□□□ 0.32
SNX12-206ENST00000622259 PPP4R3BQ5MIZ7 849 aa17.08■□□□□ 0.32
SNX12-206ENST00000622259 CWF19L1Q69YN2 538 aaKnown RBP17.08■□□□□ 0.32
SNX12-206ENST00000622259 SIRT2Q8IXJ6 389 aa17.08■□□□□ 0.32
SNX12-206ENST00000622259 RGS22Q8NE09 1264 aa17.08■□□□□ 0.32
SNX12-206ENST00000622259 SEC62Q99442 399 aaKnown RBP17.08■□□□□ 0.32
SNX12-206ENST00000622259 TLE6Q9H808 572 aa17.08■□□□□ 0.32
SNX12-206ENST00000622259 SORCS3Q9UPU3 1222 aa17.08■□□□□ 0.32
SNX12-206ENST00000622259 RNF113AO15541 343 aaKnown RBP17.07■□□□□ 0.32
SNX12-206ENST00000622259 PI15O43692 258 aa17.07■□□□□ 0.32
SNX12-206ENST00000622259 CHRNA1P02708 482 aa17.07■□□□□ 0.32
SNX12-206ENST00000622259 SP2Q02086 613 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms