RNA–Protein interactions for RNA: ENST00000622186.4

SLC6A6-210, Transcript of solute carrier family 6 member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-210ENST00000622186 BASP1P80723 227 aaKnown RBP13.11□□□□□ -0.31
SLC6A6-210ENST00000622186 CDHR1Q96JP9 859 aa13.11□□□□□ -0.31
SLC6A6-210ENST00000622186 FLT4P35916 1363 aa13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 POLR2FP61218 127 aaKnown RBP13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 FANCCQ00597 558 aa13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 LMNB2Q03252 620 aa13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 ADAM9Q13443 819 aa13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 ADCK2Q7Z695 626 aa13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 PHF21AQ96BD5 680 aa13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 USP26Q9BXU7 913 aa13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 IFT140Q96RY7 1462 aa13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 ZAP70P43403 619 aa13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 MESDQ14696 234 aa13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 STXBP2Q15833 593 aa13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 EGFL8Q99944 293 aa13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 DONSONQ9NYP3 566 aa13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 GCKRQ14397 625 aa13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 WHAMMP3Q1A5X7 153 aa13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 CIAPIN1Q6FI81 312 aa13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 STX19Q8N4C7 294 aa13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 MAP3K20Q9NYL2 800 aaKnown RBP13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 PASKQ96RG2 1323 aa13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 A6NNZ2 444 aa13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 TRPA1O75762 1119 aa13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 CA4P22748 312 aa13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 ARHGAP25P42331 645 aa13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 TUBB8Q3ZCM7 444 aa13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 HSP90AA5PQ58FG0 334 aa13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 PDXDC1Q6P996 788 aa13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 TEX2Q8IWB9 1127 aa13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 RNF168Q8IYW5 571 aaPredicted RBP13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 BLIDQ8IZY5 108 aa13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 VPS39Q96JC1 886 aa13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 E2F6O75461 281 aa13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 MYO1DO94832 1006 aa13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 PSAPP07602 524 aa13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 GYG1P46976 350 aa13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 RALGDSQ12967 914 aa13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 ACCSQ96QU6 501 aa13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 OSBPL10Q9BXB5 764 aa13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 FSD1LQ9BXM9 530 aa13.1□□□□□ -0.31
SLC6A6-210ENST00000622186 RASGRF2O14827 1237 aa13.09□□□□□ -0.31
SLC6A6-210ENST00000622186 CFLARO15519 480 aa13.09□□□□□ -0.31
SLC6A6-210ENST00000622186 CYBBP04839 570 aa13.09□□□□□ -0.31
SLC6A6-210ENST00000622186 MECOMQ03112 1051 aa13.09□□□□□ -0.31
SLC6A6-210ENST00000622186 DNAJC24Q6P3W2 148 aa13.09□□□□□ -0.31
SLC6A6-210ENST00000622186 TEX9Q8N6V9 391 aa13.09□□□□□ -0.31
SLC6A6-210ENST00000622186 SCG3Q8WXD2 468 aaKnown RBP13.09□□□□□ -0.31
SLC6A6-210ENST00000622186 CHAMP1Q96JM3 812 aa13.09□□□□□ -0.31
SLC6A6-210ENST00000622186 CACNA2D2Q9NY47 1150 aa13.09□□□□□ -0.31
SLC6A6-210ENST00000622186 WIZO95785 1651 aa13.09□□□□□ -0.31
SLC6A6-210ENST00000622186 MAPK4P31152 587 aa13.09□□□□□ -0.31
SLC6A6-210ENST00000622186 NEK8Q86SG6 692 aa13.09□□□□□ -0.31
SLC6A6-210ENST00000622186 KLHDC4Q8TBB5 520 aa13.09□□□□□ -0.31
SLC6A6-210ENST00000622186 LRRC37BQ96QE4 947 aa13.09□□□□□ -0.31
SLC6A6-210ENST00000622186 KLRF2D3W0D1 207 aa13.09□□□□□ -0.31
SLC6A6-210ENST00000622186 GTPBP6O43824 516 aaPredicted RBP13.09□□□□□ -0.31
SLC6A6-210ENST00000622186 ALDH1A1P00352 501 aa13.09□□□□□ -0.31
SLC6A6-210ENST00000622186 DEUP1Q05D60 604 aa13.09□□□□□ -0.31
SLC6A6-210ENST00000622186 CDO1Q16878 200 aa13.09□□□□□ -0.31
SLC6A6-210ENST00000622186 ARHGAP45Q92619 1136 aa13.09□□□□□ -0.31
SLC6A6-210ENST00000622186 TRIM11Q96F44 468 aa13.09□□□□□ -0.31
SLC6A6-210ENST00000622186 PAWRQ96IZ0 340 aaKnown RBP13.09□□□□□ -0.31
SLC6A6-210ENST00000622186 ZSCAN10Q96SZ4 725 aaPredicted RBP13.09□□□□□ -0.31
SLC6A6-210ENST00000622186 NDFIP2Q9NV92 336 aa13.09□□□□□ -0.31
SLC6A6-210ENST00000622186 FOSP01100 380 aaPredicted RBP13.09□□□□□ -0.31
SLC6A6-210ENST00000622186 MSH2P43246 934 aa13.09□□□□□ -0.31
SLC6A6-210ENST00000622186 TAS2R42Q7RTR8 314 aa13.09□□□□□ -0.31
SLC6A6-210ENST00000622186 B4GALNT2Q8NHY0 566 aa13.09□□□□□ -0.31
SLC6A6-210ENST00000622186 ZMAT2Q96NC0 199 aaKnown RBP13.09□□□□□ -0.31
SLC6A6-210ENST00000622186 AMNQ9BXJ7 453 aa13.09□□□□□ -0.31
SLC6A6-210ENST00000622186 KIF17Q9P2E2 1029 aa13.09□□□□□ -0.31
SLC6A6-210ENST00000622186 HOXC9P31274 260 aa13.09□□□□□ -0.31
SLC6A6-210ENST00000622186 CCDC85BQ15834 202 aaPredicted RBP13.09□□□□□ -0.31
SLC6A6-210ENST00000622186 GPKOWQ92917 476 aaPredicted RBP eCLIP13.09□□□□□ -0.315e-8■■■■□ 19.9
SLC6A6-210ENST00000622186 IQCDQ96DY2 449 aa13.09□□□□□ -0.31
SLC6A6-210ENST00000622186 PCIF1Q9H4Z3 704 aa13.09□□□□□ -0.31
SLC6A6-210ENST00000622186 CAPN11Q9UMQ6 739 aa13.09□□□□□ -0.31
SLC6A6-210ENST00000622186 RC3H1Q5TC82 1133 aaKnown RBP13.08□□□□□ -0.31
SLC6A6-210ENST00000622186 FAM196AQ6ZSG2 479 aa13.08□□□□□ -0.31
SLC6A6-210ENST00000622186 MRPL50Q8N5N7 158 aaKnown RBP13.08□□□□□ -0.31
SLC6A6-210ENST00000622186 NAF1Q96HR8 494 aaKnown RBP13.08□□□□□ -0.31
SLC6A6-210ENST00000622186 TRIM15Q9C019 465 aa13.08□□□□□ -0.31
SLC6A6-210ENST00000622186 FAM47DPA6NHR8 397 aa13.08□□□□□ -0.32
SLC6A6-210ENST00000622186 ESRRGP62508 458 aa13.08□□□□□ -0.32
SLC6A6-210ENST00000622186 BTBD8Q5XKL5 378 aa13.08□□□□□ -0.32
SLC6A6-210ENST00000622186 KRT40Q6A162 431 aa13.08□□□□□ -0.32
SLC6A6-210ENST00000622186 PDXDC2PQ6P474 469 aa13.08□□□□□ -0.32
SLC6A6-210ENST00000622186 THEGQ9P2T0 379 aa13.08□□□□□ -0.32
SLC6A6-210ENST00000622186 ARHGAP10A1A4S6 786 aa13.08□□□□□ -0.32
SLC6A6-210ENST00000622186 U2AF2P26368 475 aaKnown RBP eCLIP13.08□□□□□ -0.322e-8■■□□□ 13.2
SLC6A6-210ENST00000622186 TJAP1Q5JTD0 557 aa13.08□□□□□ -0.32
SLC6A6-210ENST00000622186 AARS2Q5JTZ9 985 aaKnown RBP13.08□□□□□ -0.32
SLC6A6-210ENST00000622186 USPL1Q5W0Q7 1092 aa13.08□□□□□ -0.32
SLC6A6-210ENST00000622186 CC2D2BQ6DHV5 1058 aa13.08□□□□□ -0.32
SLC6A6-210ENST00000622186 STAG1Q8WVM7 1258 aa13.08□□□□□ -0.32
SLC6A6-210ENST00000622186 UHRF1BP1LA0JNW5 1464 aa13.08□□□□□ -0.32
SLC6A6-210ENST00000622186 SPDYE5A6NIY4 337 aa13.08□□□□□ -0.32
SLC6A6-210ENST00000622186 HIP1RO75146 1068 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms