RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 PRR29P0C7W0 189 aa11.98□□□□□ -0.49
CPNE3-212ENST00000621783 CCT6AP40227 531 aaKnown RBP11.98□□□□□ -0.49
CPNE3-212ENST00000621783 ITGB3BPQ13352 177 aaPredicted RBP11.98□□□□□ -0.49
CPNE3-212ENST00000621783 GRB14Q14449 540 aa11.98□□□□□ -0.49
CPNE3-212ENST00000621783 POSTNQ15063 836 aa11.98□□□□□ -0.49
CPNE3-212ENST00000621783 STXBP2Q15833 593 aa11.98□□□□□ -0.49
CPNE3-212ENST00000621783 ZNF792Q3KQV3 632 aa11.98□□□□□ -0.49
CPNE3-212ENST00000621783 GNPTABQ3T906 1256 aa11.98□□□□□ -0.49
CPNE3-212ENST00000621783 TMEM119Q4V9L6 283 aa11.98□□□□□ -0.49
CPNE3-212ENST00000621783 NAALADL2Q58DX5 795 aa11.98□□□□□ -0.49
CPNE3-212ENST00000621783 HAUS3Q68CZ6 603 aa11.98□□□□□ -0.49
CPNE3-212ENST00000621783 B3GNT9Q6UX72 402 aa11.98□□□□□ -0.49
CPNE3-212ENST00000621783 OTOP1Q7RTM1 612 aa11.98□□□□□ -0.49
CPNE3-212ENST00000621783 PLEKHH3Q7Z736 793 aa11.98□□□□□ -0.49
CPNE3-212ENST00000621783 ELOA2Q8IYF1 753 aaPredicted RBP11.98□□□□□ -0.49
CPNE3-212ENST00000621783 GRAMD1CQ8IYS0 662 aa11.98□□□□□ -0.49
CPNE3-212ENST00000621783 ERMNQ8TAM6 284 aa11.98□□□□□ -0.49
CPNE3-212ENST00000621783 ERCC4Q92889 916 aaPredicted RBP11.98□□□□□ -0.49
CPNE3-212ENST00000621783 CDK5RAP3Q96JB5 506 aa11.98□□□□□ -0.49
CPNE3-212ENST00000621783 PLIN2Q99541 437 aa11.98□□□□□ -0.49
CPNE3-212ENST00000621783 MPHOSPH6Q99547 160 aaKnown RBP11.98□□□□□ -0.49
CPNE3-212ENST00000621783 FUCA2Q9BTY2 467 aa11.98□□□□□ -0.49
CPNE3-212ENST00000621783 LOC102724159A0A0B4J2E5 919 aa11.97□□□□□ -0.49
CPNE3-212ENST00000621783 POTEB3A0JP26 581 aa11.97□□□□□ -0.49
CPNE3-212ENST00000621783 B4DLN1 442 aa11.97□□□□□ -0.49
CPNE3-212ENST00000621783 EML1O00423 815 aa11.97□□□□□ -0.49
CPNE3-212ENST00000621783 DHX15O43143 795 aaKnown RBP11.97□□□□□ -0.49
CPNE3-212ENST00000621783 CA12O43570 354 aa11.97□□□□□ -0.49
CPNE3-212ENST00000621783 STRNO43815 780 aa11.97□□□□□ -0.49
CPNE3-212ENST00000621783 ATP9AO75110 1047 aa11.97□□□□□ -0.49
CPNE3-212ENST00000621783 COBLO75128 1261 aa11.97□□□□□ -0.49
CPNE3-212ENST00000621783 MED24O75448 989 aa11.97□□□□□ -0.49
CPNE3-212ENST00000621783 EIF3JO75822 258 aaKnown RBP11.97□□□□□ -0.49
CPNE3-212ENST00000621783 PNOCQ13519 176 aa11.97□□□□□ -0.49
CPNE3-212ENST00000621783 PWP2Q15269 919 aaKnown RBP11.97□□□□□ -0.49
CPNE3-212ENST00000621783 ECM1Q16610 540 aa11.97□□□□□ -0.49
CPNE3-212ENST00000621783 HYIQ5T013 277 aa11.97□□□□□ -0.49
CPNE3-212ENST00000621783 KANK3Q6NY19 840 aa11.97□□□□□ -0.49
CPNE3-212ENST00000621783 POTEBQ6S5H4 581 aa11.97□□□□□ -0.49
CPNE3-212ENST00000621783 SH3RF1Q7Z6J0 888 aa11.97□□□□□ -0.49
CPNE3-212ENST00000621783 MORC4Q8TE76 937 aa11.97□□□□□ -0.49
CPNE3-212ENST00000621783 CCDC34Q96HJ3 373 aa11.97□□□□□ -0.49
CPNE3-212ENST00000621783 CDHR1Q96JP9 859 aa11.97□□□□□ -0.49
CPNE3-212ENST00000621783 CUEDC2Q9H467 287 aa11.97□□□□□ -0.49
CPNE3-212ENST00000621783 MAGEF1Q9HAY2 307 aa11.97□□□□□ -0.49
CPNE3-212ENST00000621783 TBC1D22BQ9NU19 505 aa11.97□□□□□ -0.49
CPNE3-212ENST00000621783 STK17AQ9UEE5 414 aa11.97□□□□□ -0.49
CPNE3-212ENST00000621783 HOOK1Q9UJC3 728 aaKnown RBP11.97□□□□□ -0.49
CPNE3-212ENST00000621783 STK24Q9Y6E0 443 aa11.97□□□□□ -0.49
CPNE3-212ENST00000621783 KIAA1217Q5T5P2 1943 aa11.97□□□□□ -0.49
CPNE3-212ENST00000621783 ZNFX1Q9P2E3 1918 aaKnown RBP11.97□□□□□ -0.49
CPNE3-212ENST00000621783 ZSWIM8A7E2V4 1837 aa11.96□□□□□ -0.49
CPNE3-212ENST00000621783 SLC15A5A6NIM6 579 aa11.96□□□□□ -0.49
CPNE3-212ENST00000621783 SPATA31C2B4DYI2 1134 aa11.96□□□□□ -0.49
CPNE3-212ENST00000621783 MAFGO15525 162 aa11.96□□□□□ -0.49
CPNE3-212ENST00000621783 ABCB7O75027 752 aa11.96□□□□□ -0.49
CPNE3-212ENST00000621783 ALDH1A1P00352 501 aa11.96□□□□□ -0.49
CPNE3-212ENST00000621783 KCNA2P16389 499 aa11.96□□□□□ -0.49
CPNE3-212ENST00000621783 ICAM3P32942 547 aa11.96□□□□□ -0.49
CPNE3-212ENST00000621783 AFMP43652 599 aa11.96□□□□□ -0.49
CPNE3-212ENST00000621783 MDM2Q00987 491 aaPredicted RBP11.96□□□□□ -0.49
CPNE3-212ENST00000621783 TYRO3Q06418 890 aa11.96□□□□□ -0.49
CPNE3-212ENST00000621783 GSE1Q14687 1217 aa11.96□□□□□ -0.49
CPNE3-212ENST00000621783 SEPT14Q6ZU15 432 aa11.96□□□□□ -0.49
CPNE3-212ENST00000621783 KCNK18Q7Z418 384 aa11.96□□□□□ -0.49
CPNE3-212ENST00000621783 GAS2L3Q86XJ1 694 aa11.96□□□□□ -0.49
CPNE3-212ENST00000621783 PAGE5Q96GU1 130 aa11.96□□□□□ -0.49
CPNE3-212ENST00000621783 EIF2AK1Q9BQI3 630 aaKnown RBP11.96□□□□□ -0.49
CPNE3-212ENST00000621783 TSPY26PQ9H489 355 aa11.96□□□□□ -0.49
CPNE3-212ENST00000621783 BLOC1S4Q9NUP1 217 aa11.96□□□□□ -0.49
CPNE3-212ENST00000621783 KIAA1468Q9P260 1216 aa11.96□□□□□ -0.49
CPNE3-212ENST00000621783 TCEAL9Q9UHQ7 104 aa11.96□□□□□ -0.49
CPNE3-212ENST00000621783 DOCK5Q9H7D0 1870 aa11.95□□□□□ -0.5
CPNE3-212ENST00000621783 NFASCO94856 1347 aa11.95□□□□□ -0.5
CPNE3-212ENST00000621783 POTEFA5A3E0 1075 aa11.95□□□□□ -0.5
CPNE3-212ENST00000621783 ASB14A6NK59 587 aa11.95□□□□□ -0.5
CPNE3-212ENST00000621783 GTPBP6O43824 516 aaPredicted RBP11.95□□□□□ -0.5
CPNE3-212ENST00000621783 ECM2O94769 699 aaPredicted RBP11.95□□□□□ -0.5
CPNE3-212ENST00000621783 SPATA31C1P0DKV0 1188 aa11.95□□□□□ -0.5
CPNE3-212ENST00000621783 CCDC192P0DO97 292 aa11.95□□□□□ -0.5
CPNE3-212ENST00000621783 RPA1P27694 616 aa11.95□□□□□ -0.5
CPNE3-212ENST00000621783 KRT76Q01546 638 aa11.95□□□□□ -0.5
CPNE3-212ENST00000621783 EPHA7Q15375 998 aa11.95□□□□□ -0.5
CPNE3-212ENST00000621783 MORN1Q5T089 497 aa11.95□□□□□ -0.5
CPNE3-212ENST00000621783 POTEGQ6S5H5 508 aa11.95□□□□□ -0.5
CPNE3-212ENST00000621783 SASS6Q6UVJ0 657 aa11.95□□□□□ -0.5
CPNE3-212ENST00000621783 ARMCX2Q7L311 632 aa11.95□□□□□ -0.5
CPNE3-212ENST00000621783 MIER3Q7Z3K6 550 aa11.95□□□□□ -0.5
CPNE3-212ENST00000621783 ZNF467Q7Z7K2 595 aaPredicted RBP11.95□□□□□ -0.5
CPNE3-212ENST00000621783 FBXO16Q8IX29 292 aaPredicted RBP11.95□□□□□ -0.5
CPNE3-212ENST00000621783 REM2Q8IYK8 340 aaPredicted RBP11.95□□□□□ -0.5
CPNE3-212ENST00000621783 LARP4BQ92615 738 aaKnown RBP11.95□□□□□ -0.5
CPNE3-212ENST00000621783 RAD54LQ92698 747 aa11.95□□□□□ -0.5
CPNE3-212ENST00000621783 STAMQ92783 540 aa11.95□□□□□ -0.5
CPNE3-212ENST00000621783 MTRQ99707 1265 aa11.95□□□□□ -0.5
CPNE3-212ENST00000621783 POLR3CQ9BUI4 534 aaPredicted RBP11.95□□□□□ -0.5
CPNE3-212ENST00000621783 NT5C3AQ9H0P0 336 aa11.95□□□□□ -0.5
CPNE3-212ENST00000621783 TUFT1Q9NNX1 390 aa11.95□□□□□ -0.5
CPNE3-212ENST00000621783 TUBE1Q9UJT0 475 aa11.95□□□□□ -0.5
CPNE3-212ENST00000621783 MGAMO43451 1857 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms