RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 LONP1P36776 959 aaKnown RBP9.08□□□□□ -0.96
PTPDC1-204ENST00000620992 TRAPPC10P48553 1259 aa9.08□□□□□ -0.96
PTPDC1-204ENST00000620992 NFIXQ14938 502 aa9.08□□□□□ -0.96
PTPDC1-204ENST00000620992 PPP1R7Q15435 360 aa9.08□□□□□ -0.96
PTPDC1-204ENST00000620992 MAP9Q49MG5 647 aa9.08□□□□□ -0.96
PTPDC1-204ENST00000620992 SCYL2Q6P3W7 929 aa9.08□□□□□ -0.96
PTPDC1-204ENST00000620992 PHLDB2Q86SQ0 1253 aa9.08□□□□□ -0.96
PTPDC1-204ENST00000620992 CERS3Q8IU89 383 aa9.08□□□□□ -0.96
PTPDC1-204ENST00000620992 NOA1Q8NC60 698 aaKnown RBP9.08□□□□□ -0.96
PTPDC1-204ENST00000620992 TNFRSF25Q93038 417 aa9.08□□□□□ -0.96
PTPDC1-204ENST00000620992 CTTNBP2NLQ9P2B4 639 aa9.08□□□□□ -0.96
PTPDC1-204ENST00000620992 ECM29Q5VYK3 1845 aa9.08□□□□□ -0.96
PTPDC1-204ENST00000620992 PAPPAQ13219 1627 aa9.08□□□□□ -0.96
PTPDC1-204ENST00000620992 RRAGAQ7L523 313 aa9.08□□□□□ -0.96
PTPDC1-204ENST00000620992 FAM178BQ8IXR5 827 aa9.08□□□□□ -0.96
PTPDC1-204ENST00000620992 WRNIP1Q96S55 665 aa9.08□□□□□ -0.96
PTPDC1-204ENST00000620992 TMEM60Q9H2L4 133 aa9.08□□□□□ -0.96
PTPDC1-204ENST00000620992 FNDC3AQ9Y2H6 1198 aaKnown RBP9.08□□□□□ -0.96
PTPDC1-204ENST00000620992 NUB1Q9Y5A7 615 aa9.08□□□□□ -0.96
PTPDC1-204ENST00000620992 GOLGA6L7A0A1B0GV03 622 aa9.07□□□□□ -0.96
PTPDC1-204ENST00000620992 SFI1A8K8P3 1242 aa9.07□□□□□ -0.96
PTPDC1-204ENST00000620992 N4BP1O75113 896 aaKnown RBP9.07□□□□□ -0.96
PTPDC1-204ENST00000620992 ZMYND10O75800 440 aa9.07□□□□□ -0.96
PTPDC1-204ENST00000620992 PMS1P54277 932 aaKnown RBP9.07□□□□□ -0.96
PTPDC1-204ENST00000620992 SLC8A3P57103 927 aa9.07□□□□□ -0.96
PTPDC1-204ENST00000620992 ZSCAN26Q16670 478 aa9.07□□□□□ -0.96
PTPDC1-204ENST00000620992 C4orf50Q6ZRC1 276 aa9.07□□□□□ -0.96
PTPDC1-204ENST00000620992 CCDC117Q8IWD4 279 aaPredicted RBP9.07□□□□□ -0.96
PTPDC1-204ENST00000620992 PPM1KQ8N3J5 372 aa9.07□□□□□ -0.96
PTPDC1-204ENST00000620992 OTUD5Q96G74 571 aa9.07□□□□□ -0.96
PTPDC1-204ENST00000620992 AS3MTQ9HBK9 375 aa9.07□□□□□ -0.96
PTPDC1-204ENST00000620992 PCDHA4Q9UN74 947 aa9.07□□□□□ -0.96
PTPDC1-204ENST00000620992 LEMD3Q9Y2U8 911 aa9.07□□□□□ -0.96
PTPDC1-204ENST00000620992 ITIH6Q6UXX5 1313 aa9.07□□□□□ -0.96
PTPDC1-204ENST00000620992 NDC80O14777 642 aa9.07□□□□□ -0.96
PTPDC1-204ENST00000620992 PCP11498 1178 aaKnown RBP9.07□□□□□ -0.96
PTPDC1-204ENST00000620992 CAPN2P17655 700 aa9.07□□□□□ -0.96
PTPDC1-204ENST00000620992 WHAMMP3Q1A5X7 153 aa9.07□□□□□ -0.96
PTPDC1-204ENST00000620992 CLEC4GQ6UXB4 293 aa9.07□□□□□ -0.96
PTPDC1-204ENST00000620992 ATP8A2Q9NTI2 1148 aa9.07□□□□□ -0.96
PTPDC1-204ENST00000620992 TXNDC16Q9P2K2 825 aa9.07□□□□□ -0.96
PTPDC1-204ENST00000620992 AKT3Q9Y243 479 aa9.07□□□□□ -0.96
PTPDC1-204ENST00000620992 LRP6O75581 1613 aa9.07□□□□□ -0.96
PTPDC1-204ENST00000620992 POLGP54098 1239 aaPredicted RBP9.07□□□□□ -0.96
PTPDC1-204ENST00000620992 TYW1BQ6NUM6 668 aa9.07□□□□□ -0.96
PTPDC1-204ENST00000620992 CNNM4Q6P4Q7 775 aa9.07□□□□□ -0.96
PTPDC1-204ENST00000620992 CAPN12Q6ZSI9 719 aa9.07□□□□□ -0.96
PTPDC1-204ENST00000620992 MB21D1Q8N884 522 aa9.07□□□□□ -0.96
PTPDC1-204ENST00000620992 MAK16Q9BXY0 300 aaKnown RBP9.07□□□□□ -0.96
PTPDC1-204ENST00000620992 PCIF1Q9H4Z3 704 aa9.07□□□□□ -0.96
PTPDC1-204ENST00000620992 FAN1Q9Y2M0 1017 aa9.07□□□□□ -0.96
PTPDC1-204ENST00000620992 MYH8P13535 1937 aa9.07□□□□□ -0.96
PTPDC1-204ENST00000620992 SPATA31A6Q5VVP1 1343 aa9.07□□□□□ -0.96
PTPDC1-204ENST00000620992 KNL1Q8NG31 2342 aa9.07□□□□□ -0.96
PTPDC1-204ENST00000620992 CYP27A1Q02318 531 aa9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 SUPT20HL1Q3ZLR7 823 aa9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 ODR4Q5SWX8 454 aa9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 BEND6Q5SZJ8 279 aaPredicted RBP9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 SH3RF3Q8TEJ3 882 aaPredicted RBP9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 AMNQ9BXJ7 453 aa9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 DDX25Q9UHL0 483 aaKnown RBP9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 ORC4O43929 436 aa9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 PRPF6O94906 941 aaKnown RBP9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 LIG4P49917 911 aa9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 GRAPQ13588 217 aa9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 ARL6IP4Q66PJ3 421 aaKnown RBP9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 NEK8Q86SG6 692 aa9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 GRAPLQ8TC17 118 aaPredicted RBP9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 TUBGCP2Q9BSJ2 902 aa9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 SELENOOQ9BVL4 669 aa9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 SEPT9Q9UHD8 586 aaPredicted RBP9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 K7ENM7 598 aa9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 SRGAP2CP0DJJ0 459 aa9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 ARHGAP25P42331 645 aa9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 KLK7P49862 253 aa9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 TUBB2AQ13885 445 aa9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 CASP8Q14790 479 aa9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 SEPT2Q15019 361 aa9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 VPS72Q15906 364 aa9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 IFI16Q16666 785 aaKnown RBP9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 KLHL7Q8IXQ5 586 aa9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 C7orf31Q8N865 590 aa9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 PRPF38AQ8NAV1 312 aaKnown RBP9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 TUBB2BQ9BVA1 445 aa9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 KCNK9Q9NPC2 374 aa9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 AGPAT5Q9NUQ2 364 aa9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 MRPL11Q9Y3B7 192 aaKnown RBP9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 SLIT2O94813 1529 aa9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 DDX60Q8IY21 1712 aaKnown RBP9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 HNRNPDLO14979 420 aaKnown RBP9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 CLIC2O15247 247 aa9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 MYZAPP0CAP1 466 aa9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 BMP3P12645 472 aa9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 MAGEA1P43355 309 aa9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 KLHL30Q0D2K2 578 aa9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 LRCH2Q5VUJ6 765 aa9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 TXNRD3Q86VQ6 643 aa9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 ADSSL1Q8N142 457 aa9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 MARCH10Q8NA82 808 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms