RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 YTHDF3Q7Z739 585 aaKnown RBP21.55■■□□□ 1.04
PDLIM3-212ENST00000620787 MYOCDQ8IZQ8 938 aa21.55■■□□□ 1.04
PDLIM3-212ENST00000620787 USP38Q8NB14 1042 aa21.55■■□□□ 1.04
PDLIM3-212ENST00000620787 ANKRD2Q9GZV1 360 aa21.55■■□□□ 1.04
PDLIM3-212ENST00000620787 SEC63Q9UGP8 760 aaKnown RBP21.55■■□□□ 1.04
PDLIM3-212ENST00000620787 TMEM59LQ9UK28 342 aa21.55■■□□□ 1.04
PDLIM3-212ENST00000620787 MYH7BA7E2Y1 1941 aa21.54■■□□□ 1.04
PDLIM3-212ENST00000620787 A0A087X0T9 212 aa21.54■■□□□ 1.04
PDLIM3-212ENST00000620787 ESYT2A0FGR8 921 aa21.54■■□□□ 1.04
PDLIM3-212ENST00000620787 HMGB1P1B2RPK0 211 aaPredicted RBP21.54■■□□□ 1.04
PDLIM3-212ENST00000620787 FAM228BP0C875 321 aa21.54■■□□□ 1.04
PDLIM3-212ENST00000620787 MDH1P40925 334 aaKnown RBP21.54■■□□□ 1.04
PDLIM3-212ENST00000620787 FKBP3Q00688 224 aaKnown RBP21.54■■□□□ 1.04
PDLIM3-212ENST00000620787 ITGB3BPQ13352 177 aaPredicted RBP21.54■■□□□ 1.04
PDLIM3-212ENST00000620787 CCDC40Q4G0X9 1142 aa21.54■■□□□ 1.04
PDLIM3-212ENST00000620787 SNX29Q8TEQ0 813 aa21.54■■□□□ 1.04
PDLIM3-212ENST00000620787 TGFBRAP1Q8WUH2 860 aa21.54■■□□□ 1.04
PDLIM3-212ENST00000620787 NCAPGQ9BPX3 1015 aa21.54■■□□□ 1.04
PDLIM3-212ENST00000620787 PACSIN1Q9BY11 444 aa21.54■■□□□ 1.04
PDLIM3-212ENST00000620787 PLAAQ9Y263 795 aa21.54■■□□□ 1.04
PDLIM3-212ENST00000620787 KIF13BQ9NQT8 1826 aa21.54■■□□□ 1.04
PDLIM3-212ENST00000620787 TDP2O95551 362 aa21.54■■□□□ 1.04
PDLIM3-212ENST00000620787 RNASE9P60153 205 aaKnown RBP21.54■■□□□ 1.04
PDLIM3-212ENST00000620787 COASYQ13057 564 aa21.54■■□□□ 1.04
PDLIM3-212ENST00000620787 MYCBPAPQ8TBZ2 947 aa21.54■■□□□ 1.04
PDLIM3-212ENST00000620787 VAT1LQ9HCJ6 419 aa21.54■■□□□ 1.04
PDLIM3-212ENST00000620787 MYO1FO00160 1098 aa21.53■■□□□ 1.04
PDLIM3-212ENST00000620787 USP8P40818 1118 aa21.53■■□□□ 1.04
PDLIM3-212ENST00000620787 PDIA5Q14554 519 aa21.53■■□□□ 1.04
PDLIM3-212ENST00000620787 MICALCLQ6ZW33 695 aa21.53■■□□□ 1.04
PDLIM3-212ENST00000620787 NLRP14Q86W24 1093 aa21.53■■□□□ 1.04
PDLIM3-212ENST00000620787 DNAJC19Q96DA6 116 aa21.53■■□□□ 1.04
PDLIM3-212ENST00000620787 CCT8L2Q96SF2 557 aa21.53■■□□□ 1.04
PDLIM3-212ENST00000620787 SAP30BPQ9UHR5 308 aaKnown RBP21.53■■□□□ 1.04
PDLIM3-212ENST00000620787 TRAF5O00463 557 aa21.53■■□□□ 1.04
PDLIM3-212ENST00000620787 LDHBP07195 334 aaKnown RBP21.53■■□□□ 1.04
PDLIM3-212ENST00000620787 SEC24CP53992 1094 aa21.53■■□□□ 1.04
PDLIM3-212ENST00000620787 TNNC1P63316 161 aa21.53■■□□□ 1.04
PDLIM3-212ENST00000620787 DIXDC1Q155Q3 683 aa21.53■■□□□ 1.04
PDLIM3-212ENST00000620787 KIAA0753Q2KHM9 967 aa21.53■■□□□ 1.04
PDLIM3-212ENST00000620787 BICDL1Q6ZP65 573 aa21.53■■□□□ 1.04
PDLIM3-212ENST00000620787 TMBIM4Q9HC24 238 aa21.53■■□□□ 1.04
PDLIM3-212ENST00000620787 PLCB1Q9NQ66 1216 aa21.53■■□□□ 1.04
PDLIM3-212ENST00000620787 SMARCA1P28370 1054 aa21.52■■□□□ 1.04
PDLIM3-212ENST00000620787 ECHS1P30084 290 aa21.52■■□□□ 1.04
PDLIM3-212ENST00000620787 HDLBPQ00341 1268 aaKnown RBP21.52■■□□□ 1.04
PDLIM3-212ENST00000620787 ECM1Q16610 540 aa21.52■■□□□ 1.04
PDLIM3-212ENST00000620787 CEP85LQ5SZL2 805 aa21.52■■□□□ 1.04
PDLIM3-212ENST00000620787 LRRC27Q9C0I9 530 aa21.52■■□□□ 1.04
PDLIM3-212ENST00000620787 TAF1DQ9H5J8 278 aaPredicted RBP21.52■■□□□ 1.04
PDLIM3-212ENST00000620787 SRRM3A6NNA2 597 aaPredicted RBP21.52■■□□□ 1.04
PDLIM3-212ENST00000620787 MNAT1P51948 309 aa21.52■■□□□ 1.04
PDLIM3-212ENST00000620787 ERVK-9P63128 1117 aa21.52■■□□□ 1.04
PDLIM3-212ENST00000620787 RAPGEF1Q13905 1077 aa21.52■■□□□ 1.04
PDLIM3-212ENST00000620787 KRT79Q5XKE5 535 aa21.52■■□□□ 1.04
PDLIM3-212ENST00000620787 MAATS1Q7Z4T9 603 aa21.52■■□□□ 1.04
PDLIM3-212ENST00000620787 MAPKAPK5Q8IW41 473 aa21.52■■□□□ 1.04
PDLIM3-212ENST00000620787 KLHL7Q8IXQ5 586 aa21.52■■□□□ 1.04
PDLIM3-212ENST00000620787 EYA3Q99504 573 aa21.52■■□□□ 1.04
PDLIM3-212ENST00000620787 FGFBP2Q9BYJ0 223 aa21.52■■□□□ 1.04
PDLIM3-212ENST00000620787 CES2O00748 559 aa21.51■■□□□ 1.03
PDLIM3-212ENST00000620787 GRIK5Q16478 980 aa21.51■■□□□ 1.03
PDLIM3-212ENST00000620787 LRIG3Q6UXM1 1119 aa21.51■■□□□ 1.03
PDLIM3-212ENST00000620787 TRIM59Q8IWR1 403 aa21.51■■□□□ 1.03
PDLIM3-212ENST00000620787 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.51■■□□□ 1.03
PDLIM3-212ENST00000620787 CABS1Q96KC9 395 aa21.51■■□□□ 1.03
PDLIM3-212ENST00000620787 CEP63Q96MT8 703 aa21.51■■□□□ 1.03
PDLIM3-212ENST00000620787 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.51■■□□□ 1.03
PDLIM3-212ENST00000620787 RAB34Q9BZG1 259 aa21.51■■□□□ 1.03
PDLIM3-212ENST00000620787 ISCUQ9H1K1 167 aa21.51■■□□□ 1.03
PDLIM3-212ENST00000620787 AIPL1Q9NZN9 384 aa21.51■■□□□ 1.03
PDLIM3-212ENST00000620787 COL16A1Q07092 1604 aaPredicted RBP21.51■■□□□ 1.03
PDLIM3-212ENST00000620787 PPP4CP60510 307 aa21.51■■□□□ 1.03
PDLIM3-212ENST00000620787 ARID5AQ03989 594 aa21.51■■□□□ 1.03
PDLIM3-212ENST00000620787 FAM133AQ8N9E0 248 aa21.51■■□□□ 1.03
PDLIM3-212ENST00000620787 EIF1ADQ8N9N8 165 aaKnown RBP21.51■■□□□ 1.03
PDLIM3-212ENST00000620787 NEDD1Q8NHV4 660 aa21.51■■□□□ 1.03
PDLIM3-212ENST00000620787 GANQ9H2C0 597 aa21.51■■□□□ 1.03
PDLIM3-212ENST00000620787 ADAMTS1Q9UHI8 967 aa21.51■■□□□ 1.03
PDLIM3-212ENST00000620787 NHSQ6T4R5 1651 aa21.5■■□□□ 1.03
PDLIM3-212ENST00000620787 FAM107AO95990 144 aa21.5■■□□□ 1.03
PDLIM3-212ENST00000620787 CDK8P49336 464 aa21.5■■□□□ 1.03
PDLIM3-212ENST00000620787 MARSP56192 900 aaKnown RBP21.5■■□□□ 1.03
PDLIM3-212ENST00000620787 KLHL30Q0D2K2 578 aa21.5■■□□□ 1.03
PDLIM3-212ENST00000620787 FAM26FQ5R3K3 315 aa21.5■■□□□ 1.03
PDLIM3-212ENST00000620787 TBC1D9BQ66K14 1250 aa21.5■■□□□ 1.03
PDLIM3-212ENST00000620787 PPP4R3AQ6IN85 833 aa21.5■■□□□ 1.03
PDLIM3-212ENST00000620787 UBA5Q9GZZ9 404 aa21.5■■□□□ 1.03
PDLIM3-212ENST00000620787 KANSL2Q9H9L4 492 aa21.5■■□□□ 1.03
PDLIM3-212ENST00000620787 GGA2Q9UJY4 613 aa21.5■■□□□ 1.03
PDLIM3-212ENST00000620787 BTNL10A8MVZ5 291 aa21.5■■□□□ 1.03
PDLIM3-212ENST00000620787 H0YGN5 161 aa21.5■■□□□ 1.03
PDLIM3-212ENST00000620787 HSD17B3P37058 310 aa21.5■■□□□ 1.03
PDLIM3-212ENST00000620787 CCDC91Q7Z6B0 441 aa21.5■■□□□ 1.03
PDLIM3-212ENST00000620787 MYCBPQ99417 103 aaPredicted RBP21.5■■□□□ 1.03
PDLIM3-212ENST00000620787 RIOX1Q9H6W3 641 aa21.5■■□□□ 1.03
PDLIM3-212ENST00000620787 NFS1Q9Y697 457 aa21.5■■□□□ 1.03
PDLIM3-212ENST00000620787 BHMG1C9JSJ3 638 aaPredicted RBP21.49■■□□□ 1.03
PDLIM3-212ENST00000620787 H0YHG0 523 aa21.49■■□□□ 1.03
PDLIM3-212ENST00000620787 BAG3O95817 575 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms