RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 KIF5AQ12840 1032 aa11.36□□□□□ -0.59
VPS11-207ENST00000620429 OR52E8Q6IFG1 317 aa11.36□□□□□ -0.59
VPS11-207ENST00000620429 LDHAL6AQ6ZMR3 332 aa11.36□□□□□ -0.59
VPS11-207ENST00000620429 NOSTRINQ8IVI9 506 aa11.36□□□□□ -0.59
VPS11-207ENST00000620429 SPICE1Q8N0Z3 855 aa11.36□□□□□ -0.59
VPS11-207ENST00000620429 FGD4Q96M96 766 aa11.36□□□□□ -0.59
VPS11-207ENST00000620429 VCXQ9H320 206 aa11.36□□□□□ -0.59
VPS11-207ENST00000620429 GDF3Q9NR23 364 aa11.36□□□□□ -0.59
VPS11-207ENST00000620429 SWAP70Q9UH65 585 aa11.36□□□□□ -0.59
VPS11-207ENST00000620429 SNAP23O00161 211 aa11.35□□□□□ -0.59
VPS11-207ENST00000620429 GSTA2P09210 222 aa11.35□□□□□ -0.59
VPS11-207ENST00000620429 CCDC166P0CW27 439 aa11.35□□□□□ -0.59
VPS11-207ENST00000620429 HPDP32754 393 aaPredicted RBP11.35□□□□□ -0.59
VPS11-207ENST00000620429 KLC1Q07866 573 aa11.35□□□□□ -0.59
VPS11-207ENST00000620429 SSRP1Q08945 709 aaKnown RBP11.35□□□□□ -0.59
VPS11-207ENST00000620429 CCDC15Q0P6D6 951 aa11.35□□□□□ -0.59
VPS11-207ENST00000620429 BIRC3Q13489 604 aa11.35□□□□□ -0.59
VPS11-207ENST00000620429 SAFBQ15424 915 aaKnown RBP eCLIP11.35□□□□□ -0.59
VPS11-207ENST00000620429 METTL24Q5JXM2 366 aa11.35□□□□□ -0.59
VPS11-207ENST00000620429 CCDC122Q5T0U0 273 aa11.35□□□□□ -0.59
VPS11-207ENST00000620429 IFT20Q8IY31 132 aa11.35□□□□□ -0.59
VPS11-207ENST00000620429 RNF168Q8IYW5 571 aaPredicted RBP11.35□□□□□ -0.59
VPS11-207ENST00000620429 HELBQ8NG08 1087 aaPredicted RBP11.35□□□□□ -0.59
VPS11-207ENST00000620429 PLA2G12BQ9BX93 195 aa11.35□□□□□ -0.59
VPS11-207ENST00000620429 FBXO2Q9UK22 296 aaPredicted RBP11.35□□□□□ -0.59
VPS11-207ENST00000620429 BZW2Q9Y6E2 419 aaKnown RBP11.35□□□□□ -0.59
VPS11-207ENST00000620429 LY75O60449 1722 aa11.35□□□□□ -0.59
VPS11-207ENST00000620429 RIC1Q4ADV7 1423 aa11.35□□□□□ -0.59
VPS11-207ENST00000620429 KRT86O43790 486 aa11.35□□□□□ -0.59
VPS11-207ENST00000620429 MBD4O95243 580 aa11.35□□□□□ -0.59
VPS11-207ENST00000620429 VIL1P09327 827 aaKnown RBP11.35□□□□□ -0.59
VPS11-207ENST00000620429 PTPREP23469 700 aa11.35□□□□□ -0.59
VPS11-207ENST00000620429 CTSWP56202 376 aa11.35□□□□□ -0.59
VPS11-207ENST00000620429 NTRK3Q16288 839 aa11.35□□□□□ -0.59
VPS11-207ENST00000620429 SLC15A2Q16348 729 aa11.35□□□□□ -0.59
VPS11-207ENST00000620429 MARCH10Q8NA82 808 aaPredicted RBP11.35□□□□□ -0.59
VPS11-207ENST00000620429 UNC45AQ9H3U1 944 aa11.35□□□□□ -0.59
VPS11-207ENST00000620429 OCEL1Q9H607 264 aa11.35□□□□□ -0.59
VPS11-207ENST00000620429 ARHGEF10LQ9HCE6 1279 aa11.35□□□□□ -0.59
VPS11-207ENST00000620429 CIDEBQ9UHD4 219 aa11.35□□□□□ -0.59
VPS11-207ENST00000620429 MYH7P12883 1935 aa11.34□□□□□ -0.59
VPS11-207ENST00000620429 PALM3A6NDB9 673 aaPredicted RBP11.34□□□□□ -0.59
VPS11-207ENST00000620429 ASAP2O43150 1006 aa11.34□□□□□ -0.59
VPS11-207ENST00000620429 GNAZP19086 355 aa11.34□□□□□ -0.59
VPS11-207ENST00000620429 CYP11B2P19099 503 aa11.34□□□□□ -0.59
VPS11-207ENST00000620429 TOB1P50616 345 aaPredicted RBP11.34□□□□□ -0.59
VPS11-207ENST00000620429 SLC7A5Q01650 507 aa11.34□□□□□ -0.59
VPS11-207ENST00000620429 CUL4BQ13620 913 aa11.34□□□□□ -0.59
VPS11-207ENST00000620429 CDKAL1Q5VV42 579 aa11.34□□□□□ -0.59
VPS11-207ENST00000620429 KANK3Q6NY19 840 aa11.34□□□□□ -0.59
VPS11-207ENST00000620429 TMEM154Q6P9G4 183 aa11.34□□□□□ -0.59
VPS11-207ENST00000620429 DIS3L2Q8IYB7 885 aaKnown RBP11.34□□□□□ -0.59
VPS11-207ENST00000620429 PPP1R14BQ96C90 147 aa11.34□□□□□ -0.59
VPS11-207ENST00000620429 HINFPQ9BQA5 517 aa11.34□□□□□ -0.59
VPS11-207ENST00000620429 VCX3BQ9H321 246 aa11.34□□□□□ -0.59
VPS11-207ENST00000620429 VCX3AQ9NNX9 186 aa11.34□□□□□ -0.59
VPS11-207ENST00000620429 PLCB1Q9NQ66 1216 aa11.34□□□□□ -0.59
VPS11-207ENST00000620429 SEC31BQ9NQW1 1179 aa11.34□□□□□ -0.59
VPS11-207ENST00000620429 ADAM22Q9P0K1 906 aa11.34□□□□□ -0.59
VPS11-207ENST00000620429 SNX12Q9UMY4 172 aa11.34□□□□□ -0.59
VPS11-207ENST00000620429 KCNJ14Q9UNX9 436 aa11.34□□□□□ -0.59
VPS11-207ENST00000620429 TMEM98Q9Y2Y6 226 aa11.34□□□□□ -0.59
VPS11-207ENST00000620429 TMCC1O94876 653 aa11.34□□□□□ -0.59
VPS11-207ENST00000620429 PTGER2P43116 358 aa11.34□□□□□ -0.59
VPS11-207ENST00000620429 ZNF131P52739 623 aa11.34□□□□□ -0.59
VPS11-207ENST00000620429 HERVK_113P62684 666 aa11.34□□□□□ -0.59
VPS11-207ENST00000620429 PPP2R2AP63151 447 aa11.34□□□□□ -0.59
VPS11-207ENST00000620429 SLC4A8Q2Y0W8 1093 aa11.34□□□□□ -0.59
VPS11-207ENST00000620429 TMEM67Q5HYA8 995 aa11.34□□□□□ -0.59
VPS11-207ENST00000620429 RNF220Q5VTB9 566 aa11.34□□□□□ -0.59
VPS11-207ENST00000620429 SPATA1Q5VX52 437 aa11.34□□□□□ -0.59
VPS11-207ENST00000620429 INTS5Q6P9B9 1019 aaKnown RBP11.34□□□□□ -0.59
VPS11-207ENST00000620429 USP49Q70CQ1 688 aa11.34□□□□□ -0.59
VPS11-207ENST00000620429 CCDC80Q76M96 950 aa11.34□□□□□ -0.59
VPS11-207ENST00000620429 WHAMMQ8TF30 809 aa11.34□□□□□ -0.59
VPS11-207ENST00000620429 AZIN2Q96A70 460 aa11.34□□□□□ -0.59
VPS11-207ENST00000620429 CENPTQ96BT3 561 aa11.34□□□□□ -0.59
VPS11-207ENST00000620429 CHMP6Q96FZ7 201 aa11.34□□□□□ -0.59
VPS11-207ENST00000620429 PURBQ96QR8 312 aaKnown RBP11.34□□□□□ -0.59
VPS11-207ENST00000620429 CNNM1Q9NRU3 951 aa11.34□□□□□ -0.59
VPS11-207ENST00000620429 SLC4A7Q9Y6M7 1214 aa11.34□□□□□ -0.59
VPS11-207ENST00000620429 ABCC12Q96J65 1359 aa11.34□□□□□ -0.59
VPS11-207ENST00000620429 DDX60Q8IY21 1712 aaKnown RBP11.33□□□□□ -0.6
VPS11-207ENST00000620429 SYNRGQ9UMZ2 1314 aa11.33□□□□□ -0.6
VPS11-207ENST00000620429 GCOM1H8Y6P7 765 aaPredicted RBP11.33□□□□□ -0.6
VPS11-207ENST00000620429 MYZAPP0CAP1 466 aa11.33□□□□□ -0.6
VPS11-207ENST00000620429 IDEP14735 1019 aa11.33□□□□□ -0.6
VPS11-207ENST00000620429 ACADSP16219 412 aa11.33□□□□□ -0.6
VPS11-207ENST00000620429 KCNQ4P56696 695 aa11.33□□□□□ -0.6
VPS11-207ENST00000620429 NLRP5P59047 1200 aa11.33□□□□□ -0.6
VPS11-207ENST00000620429 KCNJ2P63252 427 aa11.33□□□□□ -0.6
VPS11-207ENST00000620429 KRT83P78385 493 aa11.33□□□□□ -0.6
VPS11-207ENST00000620429 ITPK1Q13572 414 aa11.33□□□□□ -0.6
VPS11-207ENST00000620429 TXNRD1Q16881 649 aa11.33□□□□□ -0.6
VPS11-207ENST00000620429 SLC27A3Q5K4L6 730 aa11.33□□□□□ -0.6
VPS11-207ENST00000620429 AGBL2Q5U5Z8 902 aa11.33□□□□□ -0.6
VPS11-207ENST00000620429 TRIM68Q6AZZ1 485 aa11.33□□□□□ -0.6
VPS11-207ENST00000620429 GALNT17Q6IS24 598 aa11.33□□□□□ -0.6
VPS11-207ENST00000620429 PIGWQ7Z7B1 504 aa11.33□□□□□ -0.6
VPS11-207ENST00000620429 NCSTNQ92542 709 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms