RNA–Protein interactions for RNA: ENST00000619898.4

SPCS1-206, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPCS1, Length 4,254 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-206ENST00000619898 SH3RF1Q7Z6J0 888 aa13.46□□□□□ -0.25
SPCS1-206ENST00000619898 TMEM51Q9NW97 253 aa13.46□□□□□ -0.25
SPCS1-206ENST00000619898 HMGB1P1B2RPK0 211 aaPredicted RBP13.46□□□□□ -0.26
SPCS1-206ENST00000619898 MYCNP04198 464 aaPredicted RBP13.46□□□□□ -0.26
SPCS1-206ENST00000619898 NAA25Q14CX7 972 aa13.46□□□□□ -0.26
SPCS1-206ENST00000619898 PDXDC1Q6P996 788 aa13.46□□□□□ -0.26
SPCS1-206ENST00000619898 CLEC4GQ6UXB4 293 aa13.46□□□□□ -0.26
SPCS1-206ENST00000619898 RAD54LQ92698 747 aa13.46□□□□□ -0.26
SPCS1-206ENST00000619898 RBM17Q96I25 401 aaKnown RBP13.46□□□□□ -0.26
SPCS1-206ENST00000619898 RIOK1Q9BRS2 568 aaKnown RBP13.46□□□□□ -0.26
SPCS1-206ENST00000619898 RBM12Q9NTZ6 932 aaKnown RBP13.46□□□□□ -0.26
SPCS1-206ENST00000619898 LEMD3Q9Y2U8 911 aa13.46□□□□□ -0.26
SPCS1-206ENST00000619898 KRT14P02533 472 aa13.45□□□□□ -0.26
SPCS1-206ENST00000619898 PAPD7Q5XG87 772 aaKnown RBP13.45□□□□□ -0.26
SPCS1-206ENST00000619898 TTI2Q6NXR4 508 aa13.45□□□□□ -0.26
SPCS1-206ENST00000619898 MGARPQ8TDB4 240 aa13.45□□□□□ -0.26
SPCS1-206ENST00000619898 PBKQ96KB5 322 aa13.45□□□□□ -0.26
SPCS1-206ENST00000619898 STK32BQ9NY57 414 aa13.45□□□□□ -0.26
SPCS1-206ENST00000619898 ASIC3Q9UHC3 531 aa13.45□□□□□ -0.26
SPCS1-206ENST00000619898 DMGDHQ9UI17 866 aaKnown RBP13.45□□□□□ -0.26
SPCS1-206ENST00000619898 CAPN6Q9Y6Q1 641 aa13.45□□□□□ -0.26
SPCS1-206ENST00000619898 GFPT2O94808 682 aa13.45□□□□□ -0.26
SPCS1-206ENST00000619898 CTNNA2P26232 953 aa13.45□□□□□ -0.26
SPCS1-206ENST00000619898 COASYQ13057 564 aa13.45□□□□□ -0.26
SPCS1-206ENST00000619898 CEP95Q96GE4 821 aa13.45□□□□□ -0.26
SPCS1-206ENST00000619898 C7orf25Q9BPX7 421 aa13.45□□□□□ -0.26
SPCS1-206ENST00000619898 PLCB1Q9NQ66 1216 aa13.45□□□□□ -0.26
SPCS1-206ENST00000619898 LCMT1Q9UIC8 334 aa13.45□□□□□ -0.26
SPCS1-206ENST00000619898 ARHGEF35A5YM69 484 aa13.45□□□□□ -0.26
SPCS1-206ENST00000619898 CFBP00751 764 aa13.45□□□□□ -0.26
SPCS1-206ENST00000619898 EEF2P13639 858 aaKnown RBP13.45□□□□□ -0.26
SPCS1-206ENST00000619898 GCFC2P16383 781 aaKnown RBP13.45□□□□□ -0.26
SPCS1-206ENST00000619898 GUCY1A3Q02108 690 aa13.45□□□□□ -0.26
SPCS1-206ENST00000619898 GSTA5Q7RTV2 222 aa13.45□□□□□ -0.26
SPCS1-206ENST00000619898 SLFN12Q8IYM2 578 aa13.45□□□□□ -0.26
SPCS1-206ENST00000619898 PROM2Q8N271 834 aa13.45□□□□□ -0.26
SPCS1-206ENST00000619898 MYCBPQ99417 103 aaPredicted RBP13.45□□□□□ -0.26
SPCS1-206ENST00000619898 E9PMD0 336 aa13.44□□□□□ -0.26
SPCS1-206ENST00000619898 FOXR1Q6PIV2 292 aa13.44□□□□□ -0.26
SPCS1-206ENST00000619898 BICD1Q96G01 975 aa13.44□□□□□ -0.26
SPCS1-206ENST00000619898 FAM205AQ6ZU69 1335 aa13.44□□□□□ -0.26
SPCS1-206ENST00000619898 MYMKA6NI61 221 aa13.44□□□□□ -0.26
SPCS1-206ENST00000619898 SCNN1DP51172 638 aa13.44□□□□□ -0.26
SPCS1-206ENST00000619898 EZH2Q15910 746 aaKnown RBP13.44□□□□□ -0.26
SPCS1-206ENST00000619898 MCTP2Q6DN12 878 aa13.44□□□□□ -0.26
SPCS1-206ENST00000619898 ERGIC2Q96RQ1 377 aa13.44□□□□□ -0.26
SPCS1-206ENST00000619898 EIF3HO15372 352 aaKnown RBP eCLIP13.44□□□□□ -0.26
SPCS1-206ENST00000619898 BCRP11274 1271 aa13.44□□□□□ -0.26
SPCS1-206ENST00000619898 IFNAR2P48551 515 aa13.44□□□□□ -0.26
SPCS1-206ENST00000619898 PLTPP55058 493 aa13.44□□□□□ -0.26
SPCS1-206ENST00000619898 CORO7P57737 925 aa13.44□□□□□ -0.26
SPCS1-206ENST00000619898 SEPT2Q15019 361 aa13.44□□□□□ -0.26
SPCS1-206ENST00000619898 DDX47Q9H0S4 455 aaKnown RBP13.44□□□□□ -0.26
SPCS1-206ENST00000619898 GCNT4Q9P109 453 aa13.44□□□□□ -0.26
SPCS1-206ENST00000619898 PLAGL2Q9UPG8 496 aa13.44□□□□□ -0.26
SPCS1-206ENST00000619898 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.44□□□□□ -0.26
SPCS1-206ENST00000619898 RGPD8O14715 1765 aaPredicted RBP13.44□□□□□ -0.26
SPCS1-206ENST00000619898 hCG_1984214I3L0E3 225 aa13.44□□□□□ -0.26
SPCS1-206ENST00000619898 PRPF6O94906 941 aaKnown RBP13.44□□□□□ -0.26
SPCS1-206ENST00000619898 CAMTA2O94983 1202 aa13.44□□□□□ -0.26
SPCS1-206ENST00000619898 KCNH2Q12809 1159 aa13.44□□□□□ -0.26
SPCS1-206ENST00000619898 TAOK1Q7L7X3 1001 aa13.44□□□□□ -0.26
SPCS1-206ENST00000619898 MMGT1Q8N4V1 131 aa13.44□□□□□ -0.26
SPCS1-206ENST00000619898 ZNF713Q8N859 430 aaPredicted RBP13.44□□□□□ -0.26
SPCS1-206ENST00000619898 JPH2Q9BR39 696 aaPredicted RBP13.44□□□□□ -0.26
SPCS1-206ENST00000619898 FAM114A2Q9NRY5 505 aa13.44□□□□□ -0.26
SPCS1-206ENST00000619898 NKIRAS1Q9NYS0 192 aa13.44□□□□□ -0.26
SPCS1-206ENST00000619898 DAAM1Q9Y4D1 1078 aa13.44□□□□□ -0.26
SPCS1-206ENST00000619898 LRRC10BA6NIK2 292 aa13.43□□□□□ -0.26
SPCS1-206ENST00000619898 DDX39AO00148 427 aaKnown RBP13.43□□□□□ -0.26
SPCS1-206ENST00000619898 STXBP3O00186 592 aa13.43□□□□□ -0.26
SPCS1-206ENST00000619898 CTNND1O60716 968 aaKnown RBP13.43□□□□□ -0.26
SPCS1-206ENST00000619898 TTLL1O95922 423 aa13.43□□□□□ -0.26
SPCS1-206ENST00000619898 FERP16591 822 aa13.43□□□□□ -0.26
SPCS1-206ENST00000619898 CARSP49589 748 aaKnown RBP13.43□□□□□ -0.26
SPCS1-206ENST00000619898 PPP2R5EQ16537 467 aa13.43□□□□□ -0.26
SPCS1-206ENST00000619898 GPATCH4Q5T3I0 446 aaKnown RBP13.43□□□□□ -0.26
SPCS1-206ENST00000619898 TMED8Q6PL24 325 aaPredicted RBP13.43□□□□□ -0.26
SPCS1-206ENST00000619898 RSRC1Q96IZ7 334 aaKnown RBP13.43□□□□□ -0.26
SPCS1-206ENST00000619898 NFAT5O94916 1531 aa13.43□□□□□ -0.26
SPCS1-206ENST00000619898 NTSR2O95665 410 aa13.43□□□□□ -0.26
SPCS1-206ENST00000619898 SBK1Q52WX2 424 aa13.43□□□□□ -0.26
SPCS1-206ENST00000619898 SMIM5Q71RC9 77 aa13.43□□□□□ -0.26
SPCS1-206ENST00000619898 CROCCP2Q86T23 111 aa13.43□□□□□ -0.26
SPCS1-206ENST00000619898 KBTBD4Q9NVX7 518 aa13.43□□□□□ -0.26
SPCS1-206ENST00000619898 RIC1Q4ADV7 1423 aa13.43□□□□□ -0.26
SPCS1-206ENST00000619898 CCDC169A6NNP5 214 aa13.43□□□□□ -0.26
SPCS1-206ENST00000619898 BUB1BO60566 1050 aaPredicted RBP13.43□□□□□ -0.26
SPCS1-206ENST00000619898 CLNS1AP54105 237 aaKnown RBP13.43□□□□□ -0.26
SPCS1-206ENST00000619898 CUL1Q13616 776 aa13.43□□□□□ -0.26
SPCS1-206ENST00000619898 FAM178BQ8IXR5 827 aa13.43□□□□□ -0.26
SPCS1-206ENST00000619898 ANKRD42Q8N9B4 389 aa13.43□□□□□ -0.26
SPCS1-206ENST00000619898 NKX2-3Q8TAU0 364 aa13.43□□□□□ -0.26
SPCS1-206ENST00000619898 RGPD1P0DJD0 1748 aa13.42□□□□□ -0.26
SPCS1-206ENST00000619898 A0A1B0GUA9 196 aa13.42□□□□□ -0.26
SPCS1-206ENST00000619898 WNT7AO00755 349 aa13.42□□□□□ -0.26
SPCS1-206ENST00000619898 ATP2B4P23634 1241 aa13.42□□□□□ -0.26
SPCS1-206ENST00000619898 NT5C2P49902 561 aa13.42□□□□□ -0.26
SPCS1-206ENST00000619898 ZRSR2Q15696 482 aaKnown RBP13.42□□□□□ -0.26
SPCS1-206ENST00000619898 USP37Q86T82 979 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms