RNA–Protein interactions for RNA: ENST00000619707.4

C9orf72-206, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-206ENST00000619707 RNF217Q8TC41 542 aa9.54□□□□□ -0.88
C9orf72-206ENST00000619707 MAGEC3Q8TD91 643 aa9.54□□□□□ -0.88
C9orf72-206ENST00000619707 TBC1D5Q92609 795 aa9.54□□□□□ -0.88
C9orf72-206ENST00000619707 SYN2Q92777 582 aaPredicted RBP9.54□□□□□ -0.88
C9orf72-206ENST00000619707 P3H4Q92791 437 aa9.54□□□□□ -0.88
C9orf72-206ENST00000619707 TPX2Q9ULW0 747 aaKnown RBP9.54□□□□□ -0.88
C9orf72-206ENST00000619707 LEMD3Q9Y2U8 911 aa9.54□□□□□ -0.88
C9orf72-206ENST00000619707 ATP6V0A2Q9Y487 856 aa9.54□□□□□ -0.88
C9orf72-206ENST00000619707 ZNF142P52746 1687 aaPredicted RBP9.54□□□□□ -0.88
C9orf72-206ENST00000619707 RREB1Q92766 1687 aa9.54□□□□□ -0.88
C9orf72-206ENST00000619707 CASZ1Q86V15 1759 aa9.54□□□□□ -0.88
C9orf72-206ENST00000619707 GYG1P46976 350 aa9.54□□□□□ -0.88
C9orf72-206ENST00000619707 E2F5Q15329 346 aa9.54□□□□□ -0.88
C9orf72-206ENST00000619707 UAP1Q16222 522 aaPredicted RBP9.54□□□□□ -0.88
C9orf72-206ENST00000619707 SLC18A3Q16572 532 aa9.54□□□□□ -0.88
C9orf72-206ENST00000619707 FAM83BQ5T0W9 1011 aa9.54□□□□□ -0.88
C9orf72-206ENST00000619707 AGBL2Q5U5Z8 902 aa9.54□□□□□ -0.88
C9orf72-206ENST00000619707 UNC13DQ70J99 1090 aa9.54□□□□□ -0.88
C9orf72-206ENST00000619707 DYMQ7RTS9 669 aa9.54□□□□□ -0.88
C9orf72-206ENST00000619707 PNMA1Q8ND90 353 aa9.54□□□□□ -0.88
C9orf72-206ENST00000619707 CDK5RAP3Q96JB5 506 aa9.54□□□□□ -0.88
C9orf72-206ENST00000619707 PVALEFA0A1B0GWK0 134 aa9.53□□□□□ -0.88
C9orf72-206ENST00000619707 H0YGN5 161 aa9.53□□□□□ -0.88
C9orf72-206ENST00000619707 CYP19A1P11511 503 aaPredicted RBP9.53□□□□□ -0.88
C9orf72-206ENST00000619707 MRPL12P52815 198 aaKnown RBP9.53□□□□□ -0.88
C9orf72-206ENST00000619707 POLR2FP61218 127 aaKnown RBP9.53□□□□□ -0.88
C9orf72-206ENST00000619707 ARID5AQ03989 594 aa9.53□□□□□ -0.88
C9orf72-206ENST00000619707 ENOX2Q16206 610 aaKnown RBP9.53□□□□□ -0.88
C9orf72-206ENST00000619707 SPRED3Q2MJR0 410 aa9.53□□□□□ -0.88
C9orf72-206ENST00000619707 RCSD1Q6JBY9 416 aa9.53□□□□□ -0.88
C9orf72-206ENST00000619707 RAPGEF5Q92565 580 aa9.53□□□□□ -0.88
C9orf72-206ENST00000619707 LSM14BQ9BX40 385 aaKnown RBP9.53□□□□□ -0.88
C9orf72-206ENST00000619707 CRNKL1Q9BZJ0 848 aaKnown RBP9.53□□□□□ -0.88
C9orf72-206ENST00000619707 NOVA2Q9UNW9 492 aaKnown RBP9.53□□□□□ -0.88
C9orf72-206ENST00000619707 NFS1Q9Y697 457 aa9.53□□□□□ -0.88
C9orf72-206ENST00000619707 NUP98P52948 1817 aa9.53□□□□□ -0.88
C9orf72-206ENST00000619707 A0A1B0GUA9 196 aa9.53□□□□□ -0.88
C9orf72-206ENST00000619707 C5orf60A6NFR6 353 aa9.53□□□□□ -0.88
C9orf72-206ENST00000619707 BACH1O14867 736 aa9.53□□□□□ -0.88
C9orf72-206ENST00000619707 CEP104O60308 925 aa9.53□□□□□ -0.88
C9orf72-206ENST00000619707 TLR2O60603 784 aa9.53□□□□□ -0.88
C9orf72-206ENST00000619707 CLNS1AP54105 237 aaKnown RBP9.53□□□□□ -0.88
C9orf72-206ENST00000619707 KCNMA1Q12791 1236 aa9.53□□□□□ -0.88
C9orf72-206ENST00000619707 RAPGEF1Q13905 1077 aa9.53□□□□□ -0.88
C9orf72-206ENST00000619707 LACTB2Q53H82 288 aaPredicted RBP9.53□□□□□ -0.88
C9orf72-206ENST00000619707 MSL1Q68DK7 614 aa9.53□□□□□ -0.88
C9orf72-206ENST00000619707 DNAJC14Q6Y2X3 702 aaPredicted RBP9.53□□□□□ -0.88
C9orf72-206ENST00000619707 LRRC55Q6ZSA7 311 aa9.53□□□□□ -0.88
C9orf72-206ENST00000619707 KRT25Q7Z3Z0 450 aa9.53□□□□□ -0.88
C9orf72-206ENST00000619707 TAX1BP1Q86VP1 789 aa9.53□□□□□ -0.88
C9orf72-206ENST00000619707 DDX42Q86XP3 938 aaKnown RBP eCLIP9.53□□□□□ -0.88
C9orf72-206ENST00000619707 HVCN1Q96D96 273 aa9.53□□□□□ -0.88
C9orf72-206ENST00000619707 FAM212AQ96EL1 285 aa9.53□□□□□ -0.88
C9orf72-206ENST00000619707 BARHL2Q9NY43 387 aa9.53□□□□□ -0.88
C9orf72-206ENST00000619707 SWAP70Q9UH65 585 aa9.53□□□□□ -0.88
C9orf72-206ENST00000619707 TMEM59LQ9UK28 342 aa9.53□□□□□ -0.88
C9orf72-206ENST00000619707 FBXL5Q9UKA1 691 aa9.53□□□□□ -0.88
C9orf72-206ENST00000619707 MYMKA6NI61 221 aa9.53□□□□□ -0.88
C9orf72-206ENST00000619707 STXBP3O00186 592 aa9.53□□□□□ -0.88
C9orf72-206ENST00000619707 CES2O00748 559 aa9.53□□□□□ -0.88
C9orf72-206ENST00000619707 CYP2D6P10635 497 aa9.53□□□□□ -0.88
C9orf72-206ENST00000619707 ECHS1P30084 290 aa9.53□□□□□ -0.88
C9orf72-206ENST00000619707 KLHL30Q0D2K2 578 aa9.53□□□□□ -0.88
C9orf72-206ENST00000619707 XRCC4Q13426 336 aa9.53□□□□□ -0.88
C9orf72-206ENST00000619707 NONOQ15233 471 aaKnown RBP eCLIP9.53□□□□□ -0.88
C9orf72-206ENST00000619707 SUSD4Q5VX71 490 aa9.53□□□□□ -0.88
C9orf72-206ENST00000619707 FAM228AQ86W67 206 aa9.53□□□□□ -0.88
C9orf72-206ENST00000619707 EXOC8Q8IYI6 725 aa9.53□□□□□ -0.88
C9orf72-206ENST00000619707 TATDN2Q93075 761 aa9.53□□□□□ -0.88
C9orf72-206ENST00000619707 PBKQ96KB5 322 aa9.53□□□□□ -0.88
C9orf72-206ENST00000619707 DCP1AQ9NPI6 582 aaPredicted RBP9.53□□□□□ -0.88
C9orf72-206ENST00000619707 ZNF804BA4D1E1 1349 aa9.52□□□□□ -0.88
C9orf72-206ENST00000619707 A0A087X0T9 212 aa9.52□□□□□ -0.89
C9orf72-206ENST00000619707 PAEPP09466 180 aa9.52□□□□□ -0.89
C9orf72-206ENST00000619707 FAM228BP0C875 321 aa9.52□□□□□ -0.89
C9orf72-206ENST00000619707 MAGOHP61326 146 aaKnown RBP9.52□□□□□ -0.89
C9orf72-206ENST00000619707 GRM4Q14833 912 aa9.52□□□□□ -0.89
C9orf72-206ENST00000619707 NBPF9Q3BBW0 867 aa9.52□□□□□ -0.89
C9orf72-206ENST00000619707 KRT71Q3SY84 523 aa9.52□□□□□ -0.89
C9orf72-206ENST00000619707 ANKS1AQ92625 1134 aa9.52□□□□□ -0.89
C9orf72-206ENST00000619707 MAGOHBQ96A72 148 aaKnown RBP9.52□□□□□ -0.89
C9orf72-206ENST00000619707 PACSIN1Q9BY11 444 aa9.52□□□□□ -0.89
C9orf72-206ENST00000619707 RIC8AQ9NPQ8 531 aa9.52□□□□□ -0.89
C9orf72-206ENST00000619707 ARPP21Q9UBL0 812 aaPredicted RBP9.52□□□□□ -0.89
C9orf72-206ENST00000619707 STK17AQ9UEE5 414 aa9.52□□□□□ -0.89
C9orf72-206ENST00000619707 ADAMTS1Q9UHI8 967 aa9.52□□□□□ -0.89
C9orf72-206ENST00000619707 COL4A3BPQ9Y5P4 624 aa9.52□□□□□ -0.89
C9orf72-206ENST00000619707 KIF4AO95239 1232 aa9.52□□□□□ -0.89
C9orf72-206ENST00000619707 GBP2P32456 591 aaPredicted RBP9.52□□□□□ -0.89
C9orf72-206ENST00000619707 NAPAP54920 295 aa9.52□□□□□ -0.89
C9orf72-206ENST00000619707 TFAP4Q01664 338 aa9.52□□□□□ -0.89
C9orf72-206ENST00000619707 CACNA1SQ13698 1873 aa9.52□□□□□ -0.89
C9orf72-206ENST00000619707 CRYMQ14894 314 aa9.52□□□□□ -0.89
C9orf72-206ENST00000619707 ASIC2Q16515 512 aa9.52□□□□□ -0.89
C9orf72-206ENST00000619707 CAVIN4Q5BKX8 364 aa9.52□□□□□ -0.89
C9orf72-206ENST00000619707 TEX11Q8IYF3 940 aa9.52□□□□□ -0.89
C9orf72-206ENST00000619707 PROM2Q8N271 834 aa9.52□□□□□ -0.89
C9orf72-206ENST00000619707 LARP4BQ92615 738 aaKnown RBP9.52□□□□□ -0.89
C9orf72-206ENST00000619707 MMTAG2Q9BU76 263 aaKnown RBP9.52□□□□□ -0.89
C9orf72-206ENST00000619707 AP1M1Q9BXS5 423 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms