RNA–Protein interactions for RNA: ENST00000619138.4

CNTNAP3B-215, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-215ENST00000619138 TBC1D5Q92609 795 aa15.07■□□□□ 0
CNTNAP3B-215ENST00000619138 ZNF512BQ96KM6 892 aaPredicted RBP15.07■□□□□ 0
CNTNAP3B-215ENST00000619138 DNAJC7Q99615 494 aa15.07■□□□□ 0
CNTNAP3B-215ENST00000619138 FAM167BQ9BTA0 163 aa15.07■□□□□ 0
CNTNAP3B-215ENST00000619138 TMEM60Q9H2L4 133 aa15.07■□□□□ 0
CNTNAP3B-215ENST00000619138 USP17L12C9JPN9 530 aa15.06■□□□□ 0
CNTNAP3B-215ENST00000619138 USP17L21D6R901 530 aa15.06■□□□□ 0
CNTNAP3B-215ENST00000619138 BMP15O95972 392 aa15.06■□□□□ 0
CNTNAP3B-215ENST00000619138 CACNB1Q02641 598 aaPredicted RBP15.06■□□□□ 0
CNTNAP3B-215ENST00000619138 BIRC2Q13490 618 aa15.06■□□□□ 0
CNTNAP3B-215ENST00000619138 IL17AQ16552 155 aa15.06■□□□□ 0
CNTNAP3B-215ENST00000619138 FBXL16Q8N461 479 aa15.06■□□□□ 0
CNTNAP3B-215ENST00000619138 ZSCAN10Q96SZ4 725 aaPredicted RBP15.06■□□□□ 0
CNTNAP3B-215ENST00000619138 RNF26Q9BY78 433 aaPredicted RBP15.06■□□□□ 0
CNTNAP3B-215ENST00000619138 SPEF2Q9C093 1822 aa15.06■□□□□ 0
CNTNAP3B-215ENST00000619138 FBXO33Q7Z6M2 555 aa15.06■□□□□ 0
CNTNAP3B-215ENST00000619138 P2RX5Q93086 422 aa15.06■□□□□ 0
CNTNAP3B-215ENST00000619138 SH3GL2Q99962 352 aa15.06■□□□□ 0
CNTNAP3B-215ENST00000619138 SH2D4AQ9H788 454 aa15.06■□□□□ 0
CNTNAP3B-215ENST00000619138 MLXIPLQ9NP71 852 aa15.06■□□□□ 0
CNTNAP3B-215ENST00000619138 TPX2Q9ULW0 747 aaKnown RBP15.06■□□□□ 0
CNTNAP3B-215ENST00000619138 ATP8A1Q9Y2Q0 1164 aa15.06■□□□□ 0
CNTNAP3B-215ENST00000619138 COL5A3P25940 1745 aaPredicted RBP15.06■□□□□ 0
CNTNAP3B-215ENST00000619138 ANO9A1A5B4 782 aa15.06■□□□□ 0
CNTNAP3B-215ENST00000619138 RAD51CO43502 376 aa15.06■□□□□ 0
CNTNAP3B-215ENST00000619138 PLCG1P19174 1290 aa15.06■□□□□ 0
CNTNAP3B-215ENST00000619138 ATP2B4P23634 1241 aa15.06■□□□□ 0
CNTNAP3B-215ENST00000619138 EEF1GP26641 437 aaKnown RBP15.06■□□□□ 0
CNTNAP3B-215ENST00000619138 SH3RF1Q7Z6J0 888 aa15.06■□□□□ 0
CNTNAP3B-215ENST00000619138 LBHD1Q9BQE6 289 aaPredicted RBP15.06■□□□□ 0
CNTNAP3B-215ENST00000619138 DISC1Q9NRI5 854 aa15.06■□□□□ 0
CNTNAP3B-215ENST00000619138 TRAF5O00463 557 aa15.05■□□□□ 0
CNTNAP3B-215ENST00000619138 CTNND1O60716 968 aaKnown RBP15.05■□□□□ 0
CNTNAP3B-215ENST00000619138 RBM5P52756 815 aaKnown RBP eCLIP15.05■□□□□ 0
CNTNAP3B-215ENST00000619138 PKN1Q16512 942 aa15.05■□□□□ 0
CNTNAP3B-215ENST00000619138 MFSD14BQ5SR56 506 aa15.05■□□□□ 0
CNTNAP3B-215ENST00000619138 PDXDC2PQ6P474 469 aa15.05■□□□□ 0
CNTNAP3B-215ENST00000619138 KCNV2Q8TDN2 545 aa15.05■□□□□ 0
CNTNAP3B-215ENST00000619138 DDX20Q9UHI6 824 aaKnown RBP15.05■□□□□ 0
CNTNAP3B-215ENST00000619138 SBF2Q86WG5 1849 aa15.05■□□□□ 0
CNTNAP3B-215ENST00000619138 STK36Q9NRP7 1315 aa15.05■□□□□ 0
CNTNAP3B-215ENST00000619138 GMNCA6NCL1 334 aa15.05■□□□□ -0
CNTNAP3B-215ENST00000619138 ALDH1B1P30837 517 aa15.05■□□□□ -0
CNTNAP3B-215ENST00000619138 TCERG1LQ5VWI1 586 aa15.05■□□□□ -0
CNTNAP3B-215ENST00000619138 TRIM68Q6AZZ1 485 aa15.05■□□□□ -0
CNTNAP3B-215ENST00000619138 ARFGAP2Q8N6H7 521 aa15.05■□□□□ -0
CNTNAP3B-215ENST00000619138 DBNDD1Q9H9R9 158 aa15.05■□□□□ -0
CNTNAP3B-215ENST00000619138 POLLQ9UGP5 575 aa15.05■□□□□ -0
CNTNAP3B-215ENST00000619138 CCNT1O60563 726 aaKnown RBP15.05■□□□□ -0
CNTNAP3B-215ENST00000619138 ATP2C1P98194 919 aaPredicted RBP15.05■□□□□ -0
CNTNAP3B-215ENST00000619138 ACCSLQ4AC99 568 aa15.05■□□□□ -0
CNTNAP3B-215ENST00000619138 CABP7Q86V35 215 aa15.05■□□□□ -0
CNTNAP3B-215ENST00000619138 MMGT1Q8N4V1 131 aa15.05■□□□□ -0
CNTNAP3B-215ENST00000619138 SRBD1Q8N5C6 995 aaKnown RBP15.05■□□□□ -0
CNTNAP3B-215ENST00000619138 HVCN1Q96D96 273 aa15.05■□□□□ -0
CNTNAP3B-215ENST00000619138 NUP58Q9BVL2 599 aa15.05■□□□□ -0
CNTNAP3B-215ENST00000619138 VCPKMTQ9H867 229 aa15.05■□□□□ -0
CNTNAP3B-215ENST00000619138 RGL2O15211 777 aa15.04■□□□□ -0
CNTNAP3B-215ENST00000619138 SRGNP10124 158 aa15.04■□□□□ -0
CNTNAP3B-215ENST00000619138 NPR1P16066 1061 aa15.04■□□□□ -0
CNTNAP3B-215ENST00000619138 GSCP56915 257 aaPredicted RBP15.04■□□□□ -0
CNTNAP3B-215ENST00000619138 GKAP1Q5VSY0 366 aaPredicted RBP15.04■□□□□ -0
CNTNAP3B-215ENST00000619138 CCDC25Q86WR0 208 aa15.04■□□□□ -0
CNTNAP3B-215ENST00000619138 FAM114A1Q8IWE2 563 aa15.04■□□□□ -0
CNTNAP3B-215ENST00000619138 CCDC170Q8IYT3 715 aa15.04■□□□□ -0
CNTNAP3B-215ENST00000619138 MSL3Q8N5Y2 521 aaKnown RBP15.04■□□□□ -0
CNTNAP3B-215ENST00000619138 RSRC1Q96IZ7 334 aaKnown RBP15.04■□□□□ -0
CNTNAP3B-215ENST00000619138 PHF20Q9BVI0 1012 aa15.04■□□□□ -0
CNTNAP3B-215ENST00000619138 UBA5Q9GZZ9 404 aa15.04■□□□□ -0
CNTNAP3B-215ENST00000619138 CD209Q9NNX6 404 aa15.04■□□□□ -0
CNTNAP3B-215ENST00000619138 SCG2P13521 617 aa15.04■□□□□ -0
CNTNAP3B-215ENST00000619138 COPB2P35606 906 aa15.04■□□□□ -0
CNTNAP3B-215ENST00000619138 TBC1D16Q8TBP0 767 aa15.04■□□□□ -0
CNTNAP3B-215ENST00000619138 PACSIN1Q9BY11 444 aa15.04■□□□□ -0
CNTNAP3B-215ENST00000619138 TRIM6Q9C030 488 aaPredicted RBP15.04■□□□□ -0
CNTNAP3B-215ENST00000619138 GOLGA6L10A0A0M3HER8 536 aa15.04■□□□□ -0
CNTNAP3B-215ENST00000619138 DCDC2CA8MYV0 355 aa15.04■□□□□ -0
CNTNAP3B-215ENST00000619138 TNNC1P63316 161 aa15.04■□□□□ -0
CNTNAP3B-215ENST00000619138 SPDL1Q96EA4 605 aa15.04■□□□□ -0
CNTNAP3B-215ENST00000619138 TLR10Q9BXR5 811 aa15.04■□□□□ -0
CNTNAP3B-215ENST00000619138 NDST4Q9H3R1 872 aa15.04■□□□□ -0
CNTNAP3B-215ENST00000619138 MCM9Q9NXL9 1143 aa15.04■□□□□ -0
CNTNAP3B-215ENST00000619138 FBXL5Q9UKA1 691 aa15.04■□□□□ -0
CNTNAP3B-215ENST00000619138 COL4A1P02462 1669 aa15.03■□□□□ -0
CNTNAP3B-215ENST00000619138 DNM1LO00429 736 aa15.03■□□□□ -0
CNTNAP3B-215ENST00000619138 SARNPP82979 210 aaKnown RBP15.03■□□□□ -0
CNTNAP3B-215ENST00000619138 FAM133AQ8N9E0 248 aa15.03■□□□□ -0
CNTNAP3B-215ENST00000619138 WDR66Q8TBY9 1149 aa15.03■□□□□ -0
CNTNAP3B-215ENST00000619138 MIEF2Q96C03 454 aa15.03■□□□□ -0
CNTNAP3B-215ENST00000619138 SEC16BQ96JE7 1060 aa15.03■□□□□ -0
CNTNAP3B-215ENST00000619138 SAP30BPQ9UHR5 308 aaKnown RBP15.03■□□□□ -0
CNTNAP3B-215ENST00000619138 CYP2D6P10635 497 aa15.03■□□□□ -0
CNTNAP3B-215ENST00000619138 CALRP27797 417 aaKnown RBP15.03■□□□□ -0
CNTNAP3B-215ENST00000619138 FNTAP49354 379 aa15.03■□□□□ -0
CNTNAP3B-215ENST00000619138 CHADLQ6NUI6 762 aa15.03■□□□□ -0
CNTNAP3B-215ENST00000619138 STAMBPL1Q96FJ0 436 aa15.03■□□□□ -0
CNTNAP3B-215ENST00000619138 MASTLQ96GX5 879 aa15.03■□□□□ -0
CNTNAP3B-215ENST00000619138 ELAC2Q9BQ52 826 aaKnown RBP15.03■□□□□ -0
CNTNAP3B-215ENST00000619138 MXD3Q9BW11 206 aa15.03■□□□□ -0
CNTNAP3B-215ENST00000619138 LSM14BQ9BX40 385 aaKnown RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms