RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 CALM1P0DP23 149 aa3.34□□□□□ -1.87
NEB-220ENST00000618972 CALM2P0DP24 149 aa3.34□□□□□ -1.87
NEB-220ENST00000618972 CALM3P0DP25 149 aa3.34□□□□□ -1.87
NEB-220ENST00000618972 SLC9C1Q4G0N8 1177 aa3.34□□□□□ -1.87
NEB-220ENST00000618972 ZBTB41Q5SVQ8 909 aa3.34□□□□□ -1.87
NEB-220ENST00000618972 ZNF444Q8N0Y2 327 aaPredicted RBP3.34□□□□□ -1.87
NEB-220ENST00000618972 HOOK2Q96ED9 719 aa3.34□□□□□ -1.87
NEB-220ENST00000618972 CCDC97Q96F63 343 aaPredicted RBP3.34□□□□□ -1.87
NEB-220ENST00000618972 PRPF6O94906 941 aaKnown RBP3.34□□□□□ -1.87
NEB-220ENST00000618972 PDCLQ13371 301 aa3.34□□□□□ -1.87
NEB-220ENST00000618972 E2F5Q15329 346 aa3.34□□□□□ -1.87
NEB-220ENST00000618972 RIC8AQ9NPQ8 531 aa3.34□□□□□ -1.87
NEB-220ENST00000618972 SMARCA2P51531 1590 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 SRRM3A6NNA2 597 aaPredicted RBP3.34□□□□□ -1.88
NEB-220ENST00000618972 FOSL1P15407 271 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 MTIF2P46199 727 aaKnown RBP3.34□□□□□ -1.88
NEB-220ENST00000618972 ST13P50502 369 aaKnown RBP3.34□□□□□ -1.88
NEB-220ENST00000618972 METAP2P50579 478 aaKnown RBP eCLIP3.34□□□□□ -1.88
NEB-220ENST00000618972 HERVK_113P62684 666 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 ANGPT1Q15389 498 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 RESP18Q5W5W9 173 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 SRGAP1Q7Z6B7 1085 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 GLG1Q92896 1179 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 IL17RAQ96F46 866 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 BABAM1Q9NWV8 329 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 HNRNPCL2B2RXH8 293 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 FCER1AP12319 257 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 FERMT2Q96AC1 680 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 TRIM55Q9BYV6 548 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 KRT23Q9C075 422 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 PRDM16Q9HAZ2 1276 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 SNAPC4Q5SXM2 1469 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 KANSL1LA0AUZ9 987 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 AGPSO00116 658 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 IRS4O14654 1257 aaPredicted RBP3.34□□□□□ -1.88
NEB-220ENST00000618972 KRT5P13647 590 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 IDEP14735 1019 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 MAN1A1P33908 653 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 PAPOLAP51003 745 aaKnown RBP3.34□□□□□ -1.88
NEB-220ENST00000618972 RPS6KA2Q15349 733 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 ECM1Q16610 540 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 SEMA6BQ9H3T3 888 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 EIF6P56537 245 aaKnown RBP3.34□□□□□ -1.88
NEB-220ENST00000618972 PKN1Q16512 942 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 HHATQ5VTY9 493 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 EDEM3Q9BZQ6 932 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 UBXN6Q9BZV1 441 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 PANK4Q9NVE7 773 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 RTCBQ9Y3I0 505 aaKnown RBP3.34□□□□□ -1.88
NEB-220ENST00000618972 PCSK2P16519 638 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 VCAM1P19320 739 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 TFAP4Q01664 338 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 UBAP2Q5T6F2 1119 aaKnown RBP3.34□□□□□ -1.88
NEB-220ENST00000618972 ZCRB1Q8TBF4 217 aaKnown RBP3.34□□□□□ -1.88
NEB-220ENST00000618972 PRLRP16471 622 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 SARSP49591 514 aaKnown RBP3.34□□□□□ -1.88
NEB-220ENST00000618972 RFX8Q6ZV50 586 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 ANO5Q75V66 913 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 ELOA2Q8IYF1 753 aaPredicted RBP3.34□□□□□ -1.88
NEB-220ENST00000618972 NAF1Q96HR8 494 aaKnown RBP3.34□□□□□ -1.88
NEB-220ENST00000618972 PDP2Q9P2J9 529 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 SRP68Q9UHB9 627 aaKnown RBP3.34□□□□□ -1.88
NEB-220ENST00000618972 LRRN2O75325 713 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 BCRP11274 1271 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 ACCSLQ4AC99 568 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 GSTA5Q7RTV2 222 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 EGFL6Q8IUX8 553 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 MB21D2Q8IYB1 491 aaPredicted RBP3.34□□□□□ -1.88
NEB-220ENST00000618972 KRT12Q99456 494 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 NACA2Q9H009 215 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 L2HGDHQ9H9P8 463 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 PALMDQ9NP74 551 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 PCDHA13Q9Y5I0 950 aa3.34□□□□□ -1.88
NEB-220ENST00000618972 CUL3Q13618 768 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 MORC3Q14149 939 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 MYOCDQ8IZQ8 938 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 C4orf32Q8N8J7 132 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 KLHL33A6NCF5 533 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 RIMBP2O15034 1052 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 HPDP32754 393 aaPredicted RBP3.33□□□□□ -1.88
NEB-220ENST00000618972 CCDC153Q494R4 210 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 ANGPTL2Q9UKU9 493 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 HSPA6P17066 643 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 CCDC89Q8N998 374 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 HELLSQ9NRZ9 838 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 ITGA6P23229 1130 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 MCAMP43121 646 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 STX3Q13277 289 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 DTHD1Q6ZMT9 781 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.33□□□□□ -1.88
NEB-220ENST00000618972 GRIN2BQ13224 1484 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 SOS2Q07890 1332 aaPredicted RBP3.33□□□□□ -1.88
NEB-220ENST00000618972 ZC3H11AO75152 810 aaKnown RBP eCLIP3.33□□□□□ -1.88
NEB-220ENST00000618972 TTC4O95801 387 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 GNA11P29992 359 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 SARM1Q6SZW1 724 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 SLC4A9Q96Q91 983 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 MMADHCQ9H3L0 296 aaPredicted RBP3.33□□□□□ -1.88
NEB-220ENST00000618972 PPANQ9NQ55 473 aaKnown RBP3.33□□□□□ -1.88
NEB-220ENST00000618972 TTKP33981 857 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms