RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 PPP1R18Q6NYC8 613 aa15.19■□□□□ 0.02
CNOT3-210ENST00000618939 NIM1KQ8IY84 436 aa15.19■□□□□ 0.02
CNOT3-210ENST00000618939 PARP2Q9UGN5 583 aa15.19■□□□□ 0.02
CNOT3-210ENST00000618939 CCPG1Q9ULG6 757 aa15.19■□□□□ 0.02
CNOT3-210ENST00000618939 DCCP43146 1447 aa15.19■□□□□ 0.02
CNOT3-210ENST00000618939 CLRN2A0PK11 232 aa15.19■□□□□ 0.02
CNOT3-210ENST00000618939 PGRMC1O00264 195 aaKnown RBP15.19■□□□□ 0.02
CNOT3-210ENST00000618939 COASYQ13057 564 aa15.19■□□□□ 0.02
CNOT3-210ENST00000618939 AP3B2Q13367 1082 aa15.19■□□□□ 0.02
CNOT3-210ENST00000618939 PLCB1Q9NQ66 1216 aa15.19■□□□□ 0.02
CNOT3-210ENST00000618939 TCRBV5S4A2TA0A5A2 114 aa15.18■□□□□ 0.02
CNOT3-210ENST00000618939 GYPCP04921 128 aa15.18■□□□□ 0.02
CNOT3-210ENST00000618939 CACNB3P54284 484 aa15.18■□□□□ 0.02
CNOT3-210ENST00000618939 INTS5Q6P9B9 1019 aaKnown RBP15.18■□□□□ 0.02
CNOT3-210ENST00000618939 NACC1Q96RE7 527 aa15.18■□□□□ 0.02
CNOT3-210ENST00000618939 CEP72Q9P209 647 aa15.18■□□□□ 0.02
CNOT3-210ENST00000618939 DLG5Q8TDM6 1919 aa15.18■□□□□ 0.02
CNOT3-210ENST00000618939 GFPT2O94808 682 aa15.18■□□□□ 0.02
CNOT3-210ENST00000618939 RHOBTB3O94955 611 aa15.18■□□□□ 0.02
CNOT3-210ENST00000618939 TNNI1P19237 187 aa15.18■□□□□ 0.02
CNOT3-210ENST00000618939 CCT5P48643 541 aa15.18■□□□□ 0.02
CNOT3-210ENST00000618939 MRPS25P82663 173 aaKnown RBP15.18■□□□□ 0.02
CNOT3-210ENST00000618939 ALKBH5Q6P6C2 394 aaKnown RBP15.18■□□□□ 0.02
CNOT3-210ENST00000618939 OTUD6AQ7L8S5 288 aa15.18■□□□□ 0.02
CNOT3-210ENST00000618939 FOXP4Q8IVH2 680 aaPredicted RBP15.18■□□□□ 0.02
CNOT3-210ENST00000618939 REXO1L1PQ8IX06 675 aa15.18■□□□□ 0.02
CNOT3-210ENST00000618939 CEP63Q96MT8 703 aa15.18■□□□□ 0.02
CNOT3-210ENST00000618939 MLXIPQ9HAP2 919 aa15.18■□□□□ 0.02
CNOT3-210ENST00000618939 USTQ9Y2C2 406 aa15.18■□□□□ 0.02
CNOT3-210ENST00000618939 GJA3Q9Y6H8 435 aa15.18■□□□□ 0.02
CNOT3-210ENST00000618939 GAS8O95995 478 aa15.18■□□□□ 0.02
CNOT3-210ENST00000618939 HOXA13P31271 388 aaPredicted RBP15.18■□□□□ 0.02
CNOT3-210ENST00000618939 TAOK1Q7L7X3 1001 aa15.18■□□□□ 0.02
CNOT3-210ENST00000618939 GPATCH11Q8N954 259 aa15.18■□□□□ 0.02
CNOT3-210ENST00000618939 RIOK1Q9BRS2 568 aaKnown RBP15.18■□□□□ 0.02
CNOT3-210ENST00000618939 PPP1R3GB7ZBB8 358 aa15.18■□□□□ 0.02
CNOT3-210ENST00000618939 RGS16O15492 202 aaPredicted RBP15.18■□□□□ 0.02
CNOT3-210ENST00000618939 STAT2P52630 851 aa15.18■□□□□ 0.02
CNOT3-210ENST00000618939 C10orf76Q5T2E6 689 aa15.18■□□□□ 0.02
CNOT3-210ENST00000618939 TTC19Q6DKK2 380 aaPredicted RBP15.18■□□□□ 0.02
CNOT3-210ENST00000618939 TMEM60Q9H2L4 133 aa15.18■□□□□ 0.02
CNOT3-210ENST00000618939 PARVGQ9HBI0 331 aa15.18■□□□□ 0.02
CNOT3-210ENST00000618939 STIM2Q9P246 746 aa15.18■□□□□ 0.02
CNOT3-210ENST00000618939 FER1L4A9Z1Z3 1794 aa15.18■□□□□ 0.02
CNOT3-210ENST00000618939 SPATA31A1Q5TZJ5 1347 aa15.18■□□□□ 0.02
CNOT3-210ENST00000618939 POTEB3A0JP26 581 aa15.17■□□□□ 0.02
CNOT3-210ENST00000618939 POTECB2RU33 542 aa15.17■□□□□ 0.02
CNOT3-210ENST00000618939 AKR1B1P15121 316 aa15.17■□□□□ 0.02
CNOT3-210ENST00000618939 HNRNPH2P55795 449 aaKnown RBP15.17■□□□□ 0.02
CNOT3-210ENST00000618939 SNAP25P60880 206 aa15.17■□□□□ 0.02
CNOT3-210ENST00000618939 POTEBQ6S5H4 581 aa15.17■□□□□ 0.02
CNOT3-210ENST00000618939 TMEM179Q6ZVK1 233 aa15.17■□□□□ 0.02
CNOT3-210ENST00000618939 MCF2L2Q86YR7 1114 aa15.17■□□□□ 0.02
CNOT3-210ENST00000618939 LINC00116Q8NCU8 138 aa15.17■□□□□ 0.02
CNOT3-210ENST00000618939 LRRN2O75325 713 aa15.17■□□□□ 0.02
CNOT3-210ENST00000618939 NPR1P16066 1061 aa15.17■□□□□ 0.02
CNOT3-210ENST00000618939 ADRA2BP18089 450 aa15.17■□□□□ 0.02
CNOT3-210ENST00000618939 SEC23AQ15436 765 aa15.17■□□□□ 0.02
CNOT3-210ENST00000618939 HPS3Q969F9 1004 aa15.17■□□□□ 0.02
CNOT3-210ENST00000618939 TMOD4Q9NZQ9 345 aa15.17■□□□□ 0.02
CNOT3-210ENST00000618939 ATP1A1P05023 1023 aaKnown RBP15.17■□□□□ 0.02
CNOT3-210ENST00000618939 FAM83BQ5T0W9 1011 aa15.17■□□□□ 0.02
CNOT3-210ENST00000618939 EMBQ6PCB8 327 aa15.17■□□□□ 0.02
CNOT3-210ENST00000618939 PAF1Q8N7H5 531 aa15.17■□□□□ 0.02
CNOT3-210ENST00000618939 FEZ2Q9UHY8 353 aaPredicted RBP15.17■□□□□ 0.02
CNOT3-210ENST00000618939 STK4Q13043 487 aa15.16■□□□□ 0.02
CNOT3-210ENST00000618939 DCAF4Q8WV16 495 aa15.16■□□□□ 0.02
CNOT3-210ENST00000618939 MAIP1Q8WWC4 291 aa15.16■□□□□ 0.02
CNOT3-210ENST00000618939 FERMT1Q9BQL6 677 aa15.16■□□□□ 0.02
CNOT3-210ENST00000618939 DNAJC5Q9H3Z4 198 aa15.16■□□□□ 0.02
CNOT3-210ENST00000618939 FAM196BA6NMK8 535 aa15.16■□□□□ 0.02
CNOT3-210ENST00000618939 SRGNP10124 158 aa15.16■□□□□ 0.02
CNOT3-210ENST00000618939 GFPT1Q06210 699 aaPredicted RBP15.16■□□□□ 0.02
CNOT3-210ENST00000618939 TRPC3Q13507 836 aa15.16■□□□□ 0.02
CNOT3-210ENST00000618939 CEP128Q6ZU80 1094 aa15.16■□□□□ 0.02
CNOT3-210ENST00000618939 ADGRF4Q8IZF3 695 aa15.16■□□□□ 0.02
CNOT3-210ENST00000618939 PBKQ96KB5 322 aa15.16■□□□□ 0.02
CNOT3-210ENST00000618939 RASA1P20936 1047 aa15.16■□□□□ 0.02
CNOT3-210ENST00000618939 DCUN1D2Q6PH85 259 aa15.16■□□□□ 0.02
CNOT3-210ENST00000618939 PPP1R14CQ8TAE6 165 aa15.16■□□□□ 0.02
CNOT3-210ENST00000618939 AGTPBP1Q9UPW5 1226 aa15.16■□□□□ 0.02
CNOT3-210ENST00000618939 RRP15Q9Y3B9 282 aaKnown RBP15.16■□□□□ 0.02
CNOT3-210ENST00000618939 STXBP3O00186 592 aa15.16■□□□□ 0.02
CNOT3-210ENST00000618939 CRKP46108 304 aa15.16■□□□□ 0.02
CNOT3-210ENST00000618939 USP14P54578 494 aa15.16■□□□□ 0.02
CNOT3-210ENST00000618939 VSNL1P62760 191 aa15.16■□□□□ 0.02
CNOT3-210ENST00000618939 ARHGAP4P98171 946 aa15.16■□□□□ 0.02
CNOT3-210ENST00000618939 ARHGEF16Q5VV41 709 aa15.16■□□□□ 0.02
CNOT3-210ENST00000618939 SFR1Q86XK3 245 aa15.16■□□□□ 0.02
CNOT3-210ENST00000618939 SEPT12Q8IYM1 358 aa15.16■□□□□ 0.02
CNOT3-210ENST00000618939 ST7Q9NRC1 585 aa15.16■□□□□ 0.02
CNOT3-210ENST00000618939 DLATP10515 647 aaKnown RBP15.15■□□□□ 0.02
CNOT3-210ENST00000618939 NF2P35240 595 aa15.15■□□□□ 0.02
CNOT3-210ENST00000618939 PDE6CP51160 858 aa15.15■□□□□ 0.02
CNOT3-210ENST00000618939 QRICH1Q2TAL8 776 aa15.15■□□□□ 0.02
CNOT3-210ENST00000618939 GIMAP8Q8ND71 665 aaPredicted RBP15.15■□□□□ 0.02
CNOT3-210ENST00000618939 PALMO75781 387 aa15.15■□□□□ 0.02
CNOT3-210ENST00000618939 GH2P01242 217 aa15.15■□□□□ 0.02
CNOT3-210ENST00000618939 KLRK1P26718 216 aa15.15■□□□□ 0.02
CNOT3-210ENST00000618939 ZBTB16Q05516 673 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms