RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 CACNA2D4Q7Z3S7 1137 aa21.3■■□□□ 1
PCDHGB3-202ENST00000618934 GPBP1Q86WP2 473 aa21.3■■□□□ 1
PCDHGB3-202ENST00000618934 SIAH1Q8IUQ4 282 aa21.3■■□□□ 1
PCDHGB3-202ENST00000618934 SCFD1Q8WVM8 642 aa21.3■■□□□ 1
PCDHGB3-202ENST00000618934 RIN2Q8WYP3 895 aaPredicted RBP21.3■■□□□ 1
PCDHGB3-202ENST00000618934 CALCOCO1Q9P1Z2 691 aa21.3■■□□□ 1
PCDHGB3-202ENST00000618934 BUB1O43683 1085 aa21.3■■□□□ 1
PCDHGB3-202ENST00000618934 CYP11B2P19099 503 aa21.3■■□□□ 1
PCDHGB3-202ENST00000618934 PSMC6P62333 389 aa21.3■■□□□ 1
PCDHGB3-202ENST00000618934 CCNI2Q6ZMN8 369 aaPredicted RBP21.3■■□□□ 1
PCDHGB3-202ENST00000618934 PROM2Q8N271 834 aa21.3■■□□□ 1
PCDHGB3-202ENST00000618934 IQCDQ96DY2 449 aa21.3■■□□□ 1
PCDHGB3-202ENST00000618934 TRERF1Q96PN7 1200 aa21.3■■□□□ 1
PCDHGB3-202ENST00000618934 LRRC27Q9C0I9 530 aa21.3■■□□□ 1
PCDHGB3-202ENST00000618934 DBNDD1Q9H9R9 158 aa21.3■■□□□ 1
PCDHGB3-202ENST00000618934 KCNMB3Q9NPA1 279 aa21.3■■□□□ 1
PCDHGB3-202ENST00000618934 HPCAL4Q9UM19 191 aa21.3■■□□□ 1
PCDHGB3-202ENST00000618934 QSER1Q2KHR3 1735 aa21.3■■□□□ 1
PCDHGB3-202ENST00000618934 TARSL2A2RTX5 802 aaKnown RBP21.29■■□□□ 1
PCDHGB3-202ENST00000618934 POTEFA5A3E0 1075 aa21.29■■□□□ 1
PCDHGB3-202ENST00000618934 POTEIP0CG38 1075 aa21.29■■□□□ 1
PCDHGB3-202ENST00000618934 HERC4Q5GLZ8 1057 aaPredicted RBP21.29■■□□□ 1
PCDHGB3-202ENST00000618934 POTEGQ6S5H5 508 aa21.29■■□□□ 1
PCDHGB3-202ENST00000618934 POTEEQ6S8J3 1075 aa21.29■■□□□ 1
PCDHGB3-202ENST00000618934 TEKT1Q969V4 418 aa21.29■■□□□ 1
PCDHGB3-202ENST00000618934 OSBPL9Q96SU4 736 aa21.29■■□□□ 1
PCDHGB3-202ENST00000618934 ANO3Q9BYT9 981 aa21.29■■□□□ 1
PCDHGB3-202ENST00000618934 KCTD10Q9H3F6 313 aa21.29■■□□□ 1
PCDHGB3-202ENST00000618934 BCAS3Q9H6U6 928 aa21.29■■□□□ 1
PCDHGB3-202ENST00000618934 POLD4Q9HCU8 107 aa21.29■■□□□ 1
PCDHGB3-202ENST00000618934 PSD3Q9NYI0 1048 aa21.29■■□□□ 1
PCDHGB3-202ENST00000618934 DMGDHQ9UI17 866 aaKnown RBP21.29■■□□□ 1
PCDHGB3-202ENST00000618934 SIPA1L1O43166 1804 aa21.29■■□□□ 1
PCDHGB3-202ENST00000618934 MEIS2O14770 477 aa21.29■■□□□ 1
PCDHGB3-202ENST00000618934 ONECUT3O60422 494 aaPredicted RBP21.29■■□□□ 1
PCDHGB3-202ENST00000618934 HLA-DOAP06340 250 aa21.29■■□□□ 1
PCDHGB3-202ENST00000618934 CRKP46108 304 aa21.29■■□□□ 1
PCDHGB3-202ENST00000618934 CASP5P51878 434 aa21.29■■□□□ 1
PCDHGB3-202ENST00000618934 FAM83BQ5T0W9 1011 aa21.29■■□□□ 1
PCDHGB3-202ENST00000618934 RPGRIP1Q96KN7 1286 aa21.29■■□□□ 1
PCDHGB3-202ENST00000618934 LRRC1Q9BTT6 524 aa21.29■■□□□ 1
PCDHGB3-202ENST00000618934 LSM14BQ9BX40 385 aaKnown RBP21.29■■□□□ 1
PCDHGB3-202ENST00000618934 AFF2P51816 1311 aa21.28■■□□□ 1
PCDHGB3-202ENST00000618934 MYO3BQ8WXR4 1341 aa21.28■■□□□ 1
PCDHGB3-202ENST00000618934 MEIS1O00470 390 aa21.28■■□□□ 1
PCDHGB3-202ENST00000618934 TRIM37O94972 964 aa21.28■■□□□ 1
PCDHGB3-202ENST00000618934 GCFC2P16383 781 aaKnown RBP21.28■■□□□ 1
PCDHGB3-202ENST00000618934 MATR3P43243 847 aaKnown RBP eCLIP21.28■■□□□ 1
PCDHGB3-202ENST00000618934 POLR2FP61218 127 aaKnown RBP21.28■■□□□ 1
PCDHGB3-202ENST00000618934 HHIPL2Q6UWX4 724 aa21.28■■□□□ 1
PCDHGB3-202ENST00000618934 SH3BP5LQ7L8J4 393 aa21.28■■□□□ 1
PCDHGB3-202ENST00000618934 SMCHD1A6NHR9 2005 aa21.28■■□□□ 1
PCDHGB3-202ENST00000618934 SLC7A5Q01650 507 aa21.28■■□□□ 1
PCDHGB3-202ENST00000618934 CDC37Q16543 378 aaPredicted RBP21.28■■□□□ 1
PCDHGB3-202ENST00000618934 TDRD12Q587J7 1177 aaKnown RBP21.28■■□□□ 1
PCDHGB3-202ENST00000618934 KIAA0825Q8IV33 1275 aa21.28■■□□□ 1
PCDHGB3-202ENST00000618934 ZHX3Q9H4I2 956 aa21.28■■□□□ 1
PCDHGB3-202ENST00000618934 PJA2O43164 708 aa21.27■■□□□ 1
PCDHGB3-202ENST00000618934 SEPT2Q15019 361 aa21.27■■□□□ 1
PCDHGB3-202ENST00000618934 ZSCAN26Q16670 478 aa21.27■■□□□ 1
PCDHGB3-202ENST00000618934 MEX3CQ5U5Q3 659 aaKnown RBP21.27■■□□□ 1
PCDHGB3-202ENST00000618934 SLFN13Q68D06 897 aa21.27■■□□□ 1
PCDHGB3-202ENST00000618934 TRIM59Q8IWR1 403 aa21.27■■□□□ 1
PCDHGB3-202ENST00000618934 FAM71BQ8TC56 605 aa21.27■■□□□ 1
PCDHGB3-202ENST00000618934 TLR10Q9BXR5 811 aa21.27■■□□□ 1
PCDHGB3-202ENST00000618934 NT5C3AQ9H0P0 336 aa21.27■■□□□ 1
PCDHGB3-202ENST00000618934 SLC12A3P55017 1021 aa21.27■■□□□ 1
PCDHGB3-202ENST00000618934 ARID5AQ03989 594 aa21.27■■□□□ 1
PCDHGB3-202ENST00000618934 SPIRE1Q08AE8 756 aa21.27■■□□□ 1
PCDHGB3-202ENST00000618934 MAPK8IP2Q13387 824 aaPredicted RBP21.27■■□□□ 1
PCDHGB3-202ENST00000618934 ENOX2Q16206 610 aaKnown RBP21.27■■□□□ 1
PCDHGB3-202ENST00000618934 SPATA4Q8NEY3 305 aa21.27■■□□□ 1
PCDHGB3-202ENST00000618934 MS4A14Q96JA4 679 aa21.27■■□□□ 1
PCDHGB3-202ENST00000618934 BMP2KQ9NSY1 1161 aaPredicted RBP21.27■■□□□ 1
PCDHGB3-202ENST00000618934 EMILIN3Q9NT22 766 aa21.27■■□□□ 1
PCDHGB3-202ENST00000618934 FAM198AQ9UFP1 575 aa21.27■■□□□ 1
PCDHGB3-202ENST00000618934 PRR16Q569H4 304 aa21.26■□□□□ 0.99
PCDHGB3-202ENST00000618934 KLHDC7AQ5VTJ3 777 aa21.26■□□□□ 0.99
PCDHGB3-202ENST00000618934 CATSPER3Q86XQ3 398 aa21.26■□□□□ 0.99
PCDHGB3-202ENST00000618934 CCDC65Q8IXS2 484 aa21.26■□□□□ 0.99
PCDHGB3-202ENST00000618934 SELENOOQ9BVL4 669 aa21.26■□□□□ 0.99
PCDHGB3-202ENST00000618934 CEP72Q9P209 647 aa21.26■□□□□ 0.99
PCDHGB3-202ENST00000618934 KDM3AQ9Y4C1 1321 aa21.26■□□□□ 0.99
PCDHGB3-202ENST00000618934 JAG1P78504 1218 aa21.26■□□□□ 0.99
PCDHGB3-202ENST00000618934 FOXR2Q6PJQ5 311 aa21.26■□□□□ 0.99
PCDHGB3-202ENST00000618934 MMGT1Q8N4V1 131 aa21.26■□□□□ 0.99
PCDHGB3-202ENST00000618934 AGPSO00116 658 aa21.25■□□□□ 0.99
PCDHGB3-202ENST00000618934 RNF40O75150 1001 aa21.25■□□□□ 0.99
PCDHGB3-202ENST00000618934 USH1GQ495M9 461 aa21.25■□□□□ 0.99
PCDHGB3-202ENST00000618934 CERKLQ49MI3 558 aaPredicted RBP21.25■□□□□ 0.99
PCDHGB3-202ENST00000618934 HSP90B2PQ58FF3 399 aa21.25■□□□□ 0.99
PCDHGB3-202ENST00000618934 CRYGNQ8WXF5 182 aa21.25■□□□□ 0.99
PCDHGB3-202ENST00000618934 FAM204AQ9H8W3 233 aa21.25■□□□□ 0.99
PCDHGB3-202ENST00000618934 VIPAS39Q9H9C1 493 aa21.25■□□□□ 0.99
PCDHGB3-202ENST00000618934 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.25■□□□□ 0.99
PCDHGB3-202ENST00000618934 CYP3A7-CYP3A51PA0A087WV96 503 aa21.25■□□□□ 0.99
PCDHGB3-202ENST00000618934 SSU72P8A0A1W2PR75 194 aa21.25■□□□□ 0.99
PCDHGB3-202ENST00000618934 G3V3G9 751 aa21.25■□□□□ 0.99
PCDHGB3-202ENST00000618934 PRPF6O94906 941 aaKnown RBP21.25■□□□□ 0.99
PCDHGB3-202ENST00000618934 GDF11O95390 407 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms