RNA–Protein interactions for RNA: ENST00000618829.4

SYNRG-224, Transcript of synergin gamma, humanhuman

TSL 2

Gene SYNRG, Length 3,649 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-224ENST00000618829 SIK3Q9Y2K2 1263 aa7.84□□□□□ -1.15
SYNRG-224ENST00000618829 USP17L15C9J2P7 530 aa7.84□□□□□ -1.15
SYNRG-224ENST00000618829 USP17L13C9JLJ4 530 aa7.84□□□□□ -1.15
SYNRG-224ENST00000618829 USP17L11C9JVI0 530 aa7.84□□□□□ -1.15
SYNRG-224ENST00000618829 USP17L18D6R9N7 530 aa7.84□□□□□ -1.15
SYNRG-224ENST00000618829 USP17L22D6RA61 530 aa7.84□□□□□ -1.15
SYNRG-224ENST00000618829 USP17L17D6RBQ6 530 aa7.84□□□□□ -1.15
SYNRG-224ENST00000618829 USP17L19D6RCP7 530 aa7.84□□□□□ -1.15
SYNRG-224ENST00000618829 USP17L20D6RJB6 530 aa7.84□□□□□ -1.15
SYNRG-224ENST00000618829 SLC1A4P43007 532 aa7.84□□□□□ -1.15
SYNRG-224ENST00000618829 MRPL12P52815 198 aaKnown RBP7.84□□□□□ -1.15
SYNRG-224ENST00000618829 LRRC63Q05C16 580 aa7.84□□□□□ -1.15
SYNRG-224ENST00000618829 USP17L24Q0WX57 530 aa7.84□□□□□ -1.15
SYNRG-224ENST00000618829 IKQ13123 557 aaPredicted RBP7.84□□□□□ -1.15
SYNRG-224ENST00000618829 RAPGEF1Q13905 1077 aa7.84□□□□□ -1.15
SYNRG-224ENST00000618829 DOK7Q18PE1 504 aa7.84□□□□□ -1.15
SYNRG-224ENST00000618829 FIGNQ5HY92 759 aa7.84□□□□□ -1.15
SYNRG-224ENST00000618829 FAM26FQ5R3K3 315 aa7.84□□□□□ -1.15
SYNRG-224ENST00000618829 USP17L6PQ6QN14 398 aa7.84□□□□□ -1.15
SYNRG-224ENST00000618829 CCNI2Q6ZMN8 369 aaPredicted RBP7.84□□□□□ -1.15
SYNRG-224ENST00000618829 TBC1D22AQ8WUA7 517 aa7.84□□□□□ -1.15
SYNRG-224ENST00000618829 HDAC7Q8WUI4 952 aa7.84□□□□□ -1.15
SYNRG-224ENST00000618829 OSBPL9Q96SU4 736 aa7.84□□□□□ -1.15
SYNRG-224ENST00000618829 RABEP2Q9H5N1 569 aa7.84□□□□□ -1.15
SYNRG-224ENST00000618829 JMJD4Q9H9V9 463 aa7.84□□□□□ -1.15
SYNRG-224ENST00000618829 PSD3Q9NYI0 1048 aa7.84□□□□□ -1.15
SYNRG-224ENST00000618829 PNMA6FA0A0J9YX94 578 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 TTLL1O95922 423 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 TCP10Q12799 353 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 GPBP1Q86WP2 473 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 DHX37Q8IY37 1157 aaKnown RBP7.83□□□□□ -1.16
SYNRG-224ENST00000618829 COL4A3BPQ9Y5P4 624 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 ESYT2A0FGR8 921 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 GOLGA6BA6NDN3 693 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 FAM196BA6NMK8 535 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 IL1R1P14778 569 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 SNAP25P60880 206 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 FKBP3Q00688 224 aaKnown RBP7.83□□□□□ -1.16
SYNRG-224ENST00000618829 PDIA5Q14554 519 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 PTPROQ16827 1216 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 DNAJC21Q5F1R6 531 aaKnown RBP7.83□□□□□ -1.16
SYNRG-224ENST00000618829 SFMBT2Q5VUG0 894 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 FOXR1Q6PIV2 292 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 CREG2Q8IUH2 290 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 MS4A14Q96JA4 679 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 RUFY1Q96T51 708 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 FGFBP2Q9BYJ0 223 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 POLD4Q9HCU8 107 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 DDX4Q9NQI0 724 aaKnown RBP7.83□□□□□ -1.16
SYNRG-224ENST00000618829 DMGDHQ9UI17 866 aaKnown RBP7.83□□□□□ -1.16
SYNRG-224ENST00000618829 SERPINB13Q9UIV8 391 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 USP21Q9UK80 565 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 HYOU1Q9Y4L1 999 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.83□□□□□ -1.16
SYNRG-224ENST00000618829 ZSWIM8A7E2V4 1837 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 POTEB3A0JP26 581 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 TARSL2A2RTX5 802 aaKnown RBP7.83□□□□□ -1.16
SYNRG-224ENST00000618829 POTECB2RU33 542 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 ANKRD65E5RJM6 399 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 SYF2O95926 243 aaKnown RBP7.83□□□□□ -1.16
SYNRG-224ENST00000618829 SMARCA1P28370 1054 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 STAT3P40763 770 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 RBM5P52756 815 aaKnown RBP eCLIP7.83□□□□□ -1.16
SYNRG-224ENST00000618829 ZNF543Q08ER8 600 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 VPS72Q15906 364 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 SLC9C1Q4G0N8 1177 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 PDXDC1Q6P996 788 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 POTEBQ6S5H4 581 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 CCDC65Q8IXS2 484 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 SPATA4Q8NEY3 305 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 IQCDQ96DY2 449 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 NOX5Q96PH1 765 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 RIC8AQ9NPQ8 531 aa7.83□□□□□ -1.16
SYNRG-224ENST00000618829 FAM170AA1A519 330 aa7.82□□□□□ -1.16
SYNRG-224ENST00000618829 PPP1R11O60927 126 aaPredicted RBP7.82□□□□□ -1.16
SYNRG-224ENST00000618829 FTCDO95954 541 aa7.82□□□□□ -1.16
SYNRG-224ENST00000618829 IVLP07476 585 aa7.82□□□□□ -1.16
SYNRG-224ENST00000618829 CACNB3P54284 484 aa7.82□□□□□ -1.16
SYNRG-224ENST00000618829 CDK17Q00537 523 aa7.82□□□□□ -1.16
SYNRG-224ENST00000618829 C8orf74Q6P047 294 aa7.82□□□□□ -1.16
SYNRG-224ENST00000618829 ZNF662Q6ZS27 426 aa7.82□□□□□ -1.16
SYNRG-224ENST00000618829 LRRC55Q6ZSA7 311 aa7.82□□□□□ -1.16
SYNRG-224ENST00000618829 IFT81Q8WYA0 676 aa7.82□□□□□ -1.16
SYNRG-224ENST00000618829 ZC3H12CQ9C0D7 883 aaKnown RBP7.82□□□□□ -1.16
SYNRG-224ENST00000618829 LCMT1Q9UIC8 334 aa7.82□□□□□ -1.16
SYNRG-224ENST00000618829 SALL4Q9UJQ4 1053 aa7.82□□□□□ -1.16
SYNRG-224ENST00000618829 SCN9AQ15858 1988 aa7.82□□□□□ -1.16
SYNRG-224ENST00000618829 VGLL3A8MV65 326 aa7.82□□□□□ -1.16
SYNRG-224ENST00000618829 hCG_1984214I3L0E3 225 aa7.82□□□□□ -1.16
SYNRG-224ENST00000618829 MEIS1O00470 390 aa7.82□□□□□ -1.16
SYNRG-224ENST00000618829 EDIL3O43854 480 aa7.82□□□□□ -1.16
SYNRG-224ENST00000618829 HLA-DOAP06340 250 aa7.82□□□□□ -1.16
SYNRG-224ENST00000618829 PLA2G4BP0C869 781 aa7.82□□□□□ -1.16
SYNRG-224ENST00000618829 TCP1P17987 556 aaKnown RBP7.82□□□□□ -1.16
SYNRG-224ENST00000618829 KCNMA1Q12791 1236 aa7.82□□□□□ -1.16
SYNRG-224ENST00000618829 PSMD2Q13200 908 aa7.82□□□□□ -1.16
SYNRG-224ENST00000618829 ORC2Q13416 577 aaPredicted RBP7.82□□□□□ -1.16
SYNRG-224ENST00000618829 ADAM9Q13443 819 aa7.82□□□□□ -1.16
SYNRG-224ENST00000618829 MUM1L1Q5H9M0 696 aa7.82□□□□□ -1.16
SYNRG-224ENST00000618829 FAM83BQ5T0W9 1011 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms