RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 ARHGAP27Q6ZUM4 889 aa22.48■■□□□ 1.19
NEK3-208ENST00000618534 ZNF713Q8N859 430 aaPredicted RBP22.48■■□□□ 1.19
NEK3-208ENST00000618534 IFT81Q8WYA0 676 aa22.48■■□□□ 1.19
NEK3-208ENST00000618534 TBC1D5Q92609 795 aa22.48■■□□□ 1.19
NEK3-208ENST00000618534 SYN2Q92777 582 aaPredicted RBP22.48■■□□□ 1.19
NEK3-208ENST00000618534 FAM107BQ9H098 131 aa22.48■■□□□ 1.19
NEK3-208ENST00000618534 NUCKS1Q9H1E3 243 aaKnown RBP22.48■■□□□ 1.19
NEK3-208ENST00000618534 PANK4Q9NVE7 773 aa22.48■■□□□ 1.19
NEK3-208ENST00000618534 PACSIN2Q9UNF0 486 aaPredicted RBP22.48■■□□□ 1.19
NEK3-208ENST00000618534 GPR75-ASB3A0A0A6YYF3 556 aa22.48■■□□□ 1.19
NEK3-208ENST00000618534 NOVP48745 357 aa22.48■■□□□ 1.19
NEK3-208ENST00000618534 PDCLQ13371 301 aa22.48■■□□□ 1.19
NEK3-208ENST00000618534 LRRC47Q8N1G4 583 aaKnown RBP22.48■■□□□ 1.19
NEK3-208ENST00000618534 KDM4FA0A1W2PPD8 638 aa22.47■■□□□ 1.19
NEK3-208ENST00000618534 GNPATO15228 680 aa22.47■■□□□ 1.19
NEK3-208ENST00000618534 SSBP05455 408 aaKnown RBP eCLIP22.47■■□□□ 1.19
NEK3-208ENST00000618534 ARID5AQ03989 594 aa22.47■■□□□ 1.19
NEK3-208ENST00000618534 PAK2Q13177 524 aa22.47■■□□□ 1.19
NEK3-208ENST00000618534 PTF1AQ7RTS3 328 aa22.47■■□□□ 1.19
NEK3-208ENST00000618534 NELFCDQ8IXH7 590 aa22.47■■□□□ 1.19
NEK3-208ENST00000618534 RAPGEF1Q13905 1077 aa22.47■■□□□ 1.19
NEK3-208ENST00000618534 ENOX2Q16206 610 aaKnown RBP22.47■■□□□ 1.19
NEK3-208ENST00000618534 MICALL1Q8N3F8 863 aa22.47■■□□□ 1.19
NEK3-208ENST00000618534 KRT12Q99456 494 aa22.47■■□□□ 1.19
NEK3-208ENST00000618534 PACSIN1Q9BY11 444 aa22.47■■□□□ 1.19
NEK3-208ENST00000618534 NHSQ6T4R5 1651 aa22.46■■□□□ 1.19
NEK3-208ENST00000618534 A0A087X0T9 212 aa22.46■■□□□ 1.19
NEK3-208ENST00000618534 RPS6KA4O75676 772 aa22.46■■□□□ 1.19
NEK3-208ENST00000618534 FAM228BP0C875 321 aa22.46■■□□□ 1.19
NEK3-208ENST00000618534 HOXA7P31268 230 aaPredicted RBP22.46■■□□□ 1.19
NEK3-208ENST00000618534 ATP1A2P50993 1020 aa22.46■■□□□ 1.19
NEK3-208ENST00000618534 GRAPQ13588 217 aa22.46■■□□□ 1.19
NEK3-208ENST00000618534 SLC18A3Q16572 532 aa22.46■■□□□ 1.19
NEK3-208ENST00000618534 CFAP58Q5T655 872 aa22.46■■□□□ 1.19
NEK3-208ENST00000618534 AMIGO3Q86WK7 504 aa22.46■■□□□ 1.19
NEK3-208ENST00000618534 IQCKQ8N0W5 287 aa22.46■■□□□ 1.19
NEK3-208ENST00000618534 GRAPLQ8TC17 118 aaPredicted RBP22.46■■□□□ 1.19
NEK3-208ENST00000618534 HAS1Q92839 578 aa22.46■■□□□ 1.19
NEK3-208ENST00000618534 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.46■■□□□ 1.19
NEK3-208ENST00000618534 GPCPD1Q9NPB8 672 aa22.46■■□□□ 1.19
NEK3-208ENST00000618534 LUC7LQ9NQ29 371 aaKnown RBP22.46■■□□□ 1.19
NEK3-208ENST00000618534 SAMM50Q9Y512 469 aa22.46■■□□□ 1.19
NEK3-208ENST00000618534 PCDHGC5Q9Y5F6 944 aa22.46■■□□□ 1.19
NEK3-208ENST00000618534 ZNF233A6NK53 670 aa22.46■■□□□ 1.19
NEK3-208ENST00000618534 GUCY2FP51841 1108 aa22.46■■□□□ 1.19
NEK3-208ENST00000618534 EIF6P56537 245 aaKnown RBP22.46■■□□□ 1.19
NEK3-208ENST00000618534 RHBDL3P58872 404 aa22.46■■□□□ 1.19
NEK3-208ENST00000618534 RNASE9P60153 205 aaKnown RBP22.46■■□□□ 1.19
NEK3-208ENST00000618534 MEI1Q5TIA1 1274 aa22.46■■□□□ 1.19
NEK3-208ENST00000618534 CLEC10AQ8IUN9 316 aa22.46■■□□□ 1.19
NEK3-208ENST00000618534 CASKIN2Q8WXE0 1202 aa22.46■■□□□ 1.19
NEK3-208ENST00000618534 INPP4AQ96PE3 977 aaPredicted RBP22.46■■□□□ 1.19
NEK3-208ENST00000618534 POLD4Q9HCU8 107 aa22.46■■□□□ 1.19
NEK3-208ENST00000618534 DDX25Q9UHL0 483 aaKnown RBP22.46■■□□□ 1.19
NEK3-208ENST00000618534 LIG3P49916 1009 aa22.45■■□□□ 1.18
NEK3-208ENST00000618534 KIAA0753Q2KHM9 967 aa22.45■■□□□ 1.18
NEK3-208ENST00000618534 TRIM59Q8IWR1 403 aa22.45■■□□□ 1.18
NEK3-208ENST00000618534 FAM133AQ8N9E0 248 aa22.45■■□□□ 1.18
NEK3-208ENST00000618534 CEP63Q96MT8 703 aa22.45■■□□□ 1.18
NEK3-208ENST00000618534 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.45■■□□□ 1.18
NEK3-208ENST00000618534 CACNB1Q02641 598 aaPredicted RBP22.45■■□□□ 1.18
NEK3-208ENST00000618534 PPP4R3AQ6IN85 833 aa22.45■■□□□ 1.18
NEK3-208ENST00000618534 CERS3Q8IU89 383 aa22.45■■□□□ 1.18
NEK3-208ENST00000618534 PIK3R5Q8WYR1 880 aa22.45■■□□□ 1.18
NEK3-208ENST00000618534 UIMC1Q96RL1 719 aa22.45■■□□□ 1.18
NEK3-208ENST00000618534 ADAMTS1Q9UHI8 967 aa22.45■■□□□ 1.18
NEK3-208ENST00000618534 GRID2IPA4D2P6 1211 aa22.44■■□□□ 1.18
NEK3-208ENST00000618534 SEPT2Q15019 361 aa22.44■■□□□ 1.18
NEK3-208ENST00000618534 TRADDQ15628 312 aa22.44■■□□□ 1.18
NEK3-208ENST00000618534 ASPRV1Q53RT3 343 aa22.44■■□□□ 1.18
NEK3-208ENST00000618534 MTMR4Q9NYA4 1195 aa22.44■■□□□ 1.18
NEK3-208ENST00000618534 NPHP3-ACAD11A0A0J9YXS1 232 aa22.43■■□□□ 1.18
NEK3-208ENST00000618534 E9PMD0 336 aa22.43■■□□□ 1.18
NEK3-208ENST00000618534 PPP1R11O60927 126 aaPredicted RBP22.43■■□□□ 1.18
NEK3-208ENST00000618534 KLHL30Q0D2K2 578 aa22.43■■□□□ 1.18
NEK3-208ENST00000618534 BARGINQ6ZT62 677 aa22.43■■□□□ 1.18
NEK3-208ENST00000618534 CD209Q9NNX6 404 aa22.43■■□□□ 1.18
NEK3-208ENST00000618534 MARCH6O60337 910 aa22.43■■□□□ 1.18
NEK3-208ENST00000618534 SF3B2Q13435 895 aaKnown RBP22.43■■□□□ 1.18
NEK3-208ENST00000618534 ICE2Q659A1 982 aa22.43■■□□□ 1.18
NEK3-208ENST00000618534 PCDHA2Q9Y5H9 948 aa22.43■■□□□ 1.18
NEK3-208ENST00000618534 PLCG2P16885 1265 aa22.42■■□□□ 1.18
NEK3-208ENST00000618534 ASIC2Q16515 512 aa22.42■■□□□ 1.18
NEK3-208ENST00000618534 MREGQ8N565 214 aa22.42■■□□□ 1.18
NEK3-208ENST00000618534 RNPC3Q96LT9 517 aaKnown RBP22.42■■□□□ 1.18
NEK3-208ENST00000618534 GANQ9H2C0 597 aa22.42■■□□□ 1.18
NEK3-208ENST00000618534 AHDC1Q5TGY3 1603 aaPredicted RBP22.42■■□□□ 1.18
NEK3-208ENST00000618534 MYH7BA7E2Y1 1941 aa22.42■■□□□ 1.18
NEK3-208ENST00000618534 NDUFAB1O14561 156 aa22.42■■□□□ 1.18
NEK3-208ENST00000618534 RAD51CO43502 376 aa22.42■■□□□ 1.18
NEK3-208ENST00000618534 ERLIN2O94905 339 aa22.42■■□□□ 1.18
NEK3-208ENST00000618534 GNA14O95837 355 aa22.42■■□□□ 1.18
NEK3-208ENST00000618534 MARSP56192 900 aaKnown RBP22.42■■□□□ 1.18
NEK3-208ENST00000618534 GPSM2P81274 684 aa22.42■■□□□ 1.18
NEK3-208ENST00000618534 RC3H1Q5TC82 1133 aaKnown RBP22.42■■□□□ 1.18
NEK3-208ENST00000618534 KDM7AQ6ZMT4 941 aa22.42■■□□□ 1.18
NEK3-208ENST00000618534 JMJD4Q9H9V9 463 aa22.42■■□□□ 1.18
NEK3-208ENST00000618534 BMP2KQ9NSY1 1161 aaPredicted RBP22.42■■□□□ 1.18
NEK3-208ENST00000618534 AIPL1Q9NZN9 384 aa22.42■■□□□ 1.18
NEK3-208ENST00000618534 CLK2P49760 499 aaKnown RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms