RNA–Protein interactions for RNA: ENST00000618464.1

SYNGR3-206, Transcript of synaptogyrin 3, humanhuman

TSL 1 (best) BASIC

Gene SYNGR3, Length 1,213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-206ENST00000618464 NLRX1Q86UT6 975 aa25.32■■□□□ 1.64
SYNGR3-206ENST00000618464 DHX38Q92620 1227 aaKnown RBP25.32■■□□□ 1.64
SYNGR3-206ENST00000618464 C16orf70Q9BSU1 422 aa25.32■■□□□ 1.64
SYNGR3-206ENST00000618464 NKX2-4Q9H2Z4 354 aa25.32■■□□□ 1.64
SYNGR3-206ENST00000618464 MSRAQ9UJ68 235 aa25.32■■□□□ 1.64
SYNGR3-206ENST00000618464 YBX2Q9Y2T7 364 aaKnown RBP25.32■■□□□ 1.64
SYNGR3-206ENST00000618464 TELO2Q9Y4R8 837 aa25.32■■□□□ 1.64
SYNGR3-206ENST00000618464 TANC1Q9C0D5 1861 aa25.32■■□□□ 1.64
SYNGR3-206ENST00000618464 STXBP3O00186 592 aa25.31■■□□□ 1.64
SYNGR3-206ENST00000618464 LGALS2P05162 132 aa25.31■■□□□ 1.64
SYNGR3-206ENST00000618464 ZNF200P98182 395 aaPredicted RBP25.31■■□□□ 1.64
SYNGR3-206ENST00000618464 RAB30Q15771 203 aa25.31■■□□□ 1.64
SYNGR3-206ENST00000618464 CCDC155Q8N6L0 562 aa25.31■■□□□ 1.64
SYNGR3-206ENST00000618464 PGBD1Q96JS3 809 aa25.31■■□□□ 1.64
SYNGR3-206ENST00000618464 GBF1Q92538 1859 aa25.3■■□□□ 1.64
SYNGR3-206ENST00000618464 SPTBN5Q9NRC6 3674 aaKnown RBP25.3■■□□□ 1.64
SYNGR3-206ENST00000618464 PFKMP08237 780 aa25.3■■□□□ 1.64
SYNGR3-206ENST00000618464 PSMA5P28066 241 aa25.3■■□□□ 1.64
SYNGR3-206ENST00000618464 ADCY7P51828 1080 aa25.3■■□□□ 1.64
SYNGR3-206ENST00000618464 RABGGTBP53611 331 aa25.3■■□□□ 1.64
SYNGR3-206ENST00000618464 RCAN1P53805 252 aa25.3■■□□□ 1.64
SYNGR3-206ENST00000618464 PPP1R18Q6NYC8 613 aa25.3■■□□□ 1.64
SYNGR3-206ENST00000618464 CAGE1Q8TC20 777 aa25.3■■□□□ 1.64
SYNGR3-206ENST00000618464 GAS2L1Q99501 681 aaPredicted RBP25.3■■□□□ 1.64
SYNGR3-206ENST00000618464 GPR20Q99678 358 aa25.3■■□□□ 1.64
SYNGR3-206ENST00000618464 FTOQ9C0B1 505 aaKnown RBP eCLIP25.3■■□□□ 1.64
SYNGR3-206ENST00000618464 RIC8AQ9NPQ8 531 aa25.3■■□□□ 1.64
SYNGR3-206ENST00000618464 PKD2L1Q9P0L9 805 aa25.3■■□□□ 1.64
SYNGR3-206ENST00000618464 CHD9Q3L8U1 2897 aa25.3■■□□□ 1.64
SYNGR3-206ENST00000618464 ITGB5P18084 799 aa25.29■■□□□ 1.64
SYNGR3-206ENST00000618464 RFC2P35250 354 aa25.29■■□□□ 1.64
SYNGR3-206ENST00000618464 ADGRE1Q14246 886 aa25.29■■□□□ 1.64
SYNGR3-206ENST00000618464 HIC1Q14526 733 aa25.29■■□□□ 1.64
SYNGR3-206ENST00000618464 UTP14CQ5TAP6 766 aaKnown RBP25.29■■□□□ 1.64
SYNGR3-206ENST00000618464 EHMT1Q9H9B1 1298 aa25.29■■□□□ 1.64
SYNGR3-206ENST00000618464 PRDM6Q9NQX0 595 aa25.29■■□□□ 1.64
SYNGR3-206ENST00000618464 SLC4A7Q9Y6M7 1214 aa25.29■■□□□ 1.64
SYNGR3-206ENST00000618464 TRIP12Q14669 1992 aaPredicted RBP25.29■■□□□ 1.64
SYNGR3-206ENST00000618464 CCDC196A0A1B0GTZ2 297 aa25.28■■□□□ 1.64
SYNGR3-206ENST00000618464 SMCO2A6NFE2 343 aa25.28■■□□□ 1.64
SYNGR3-206ENST00000618464 H3BRB1 525 aa25.28■■□□□ 1.64
SYNGR3-206ENST00000618464 TRIM50Q86XT4 487 aa25.28■■□□□ 1.64
SYNGR3-206ENST00000618464 AFAP1L1Q8TED9 768 aa25.28■■□□□ 1.64
SYNGR3-206ENST00000618464 PPM1EQ8WY54 764 aa25.28■■□□□ 1.64
SYNGR3-206ENST00000618464 GPRASP2Q96D09 838 aa25.28■■□□□ 1.64
SYNGR3-206ENST00000618464 SENP7Q9BQF6 1050 aa25.28■■□□□ 1.64
SYNGR3-206ENST00000618464 TUT1Q9H6E5 874 aaKnown RBP25.28■■□□□ 1.64
SYNGR3-206ENST00000618464 SLC28A3Q9HAS3 691 aa25.28■■□□□ 1.64
SYNGR3-206ENST00000618464 BARHL2Q9NY43 387 aa25.28■■□□□ 1.64
SYNGR3-206ENST00000618464 UBIAD1Q9Y5Z9 338 aa25.28■■□□□ 1.64
SYNGR3-206ENST00000618464 ATP9AO75110 1047 aa25.27■■□□□ 1.64
SYNGR3-206ENST00000618464 CKBP12277 381 aa25.27■■□□□ 1.64
SYNGR3-206ENST00000618464 MYOGP15173 224 aa25.27■■□□□ 1.64
SYNGR3-206ENST00000618464 SELPP16109 830 aa25.27■■□□□ 1.64
SYNGR3-206ENST00000618464 MTMR1Q13613 665 aa25.27■■□□□ 1.64
SYNGR3-206ENST00000618464 LRRC8DQ7L1W4 858 aa25.27■■□□□ 1.64
SYNGR3-206ENST00000618464 WNT8BQ93098 351 aa25.27■■□□□ 1.64
SYNGR3-206ENST00000618464 USP26Q9BXU7 913 aa25.27■■□□□ 1.64
SYNGR3-206ENST00000618464 TMEM260Q9NX78 707 aa25.27■■□□□ 1.64
SYNGR3-206ENST00000618464 RBAK-RBAKDNI3L0D1 243 aa25.26■■□□□ 1.63
SYNGR3-206ENST00000618464 hCG_1984214I3L0E3 225 aa25.26■■□□□ 1.63
SYNGR3-206ENST00000618464 PPFIA3O75145 1194 aa25.26■■□□□ 1.63
SYNGR3-206ENST00000618464 SMIM10L2AP0DMW4 78 aa25.26■■□□□ 1.63
SYNGR3-206ENST00000618464 SMIM10L2BP0DMW5 78 aa25.26■■□□□ 1.63
SYNGR3-206ENST00000618464 ACTN1P12814 892 aa25.26■■□□□ 1.63
SYNGR3-206ENST00000618464 KCNA2P16389 499 aa25.26■■□□□ 1.63
SYNGR3-206ENST00000618464 PTK7Q13308 1070 aa25.26■■□□□ 1.63
SYNGR3-206ENST00000618464 ZNF713Q8N859 430 aaPredicted RBP25.26■■□□□ 1.63
SYNGR3-206ENST00000618464 GIMAP8Q8ND71 665 aaPredicted RBP25.26■■□□□ 1.63
SYNGR3-206ENST00000618464 CDHR1Q96JP9 859 aa25.26■■□□□ 1.63
SYNGR3-206ENST00000618464 JADE2Q9NQC1 790 aa25.26■■□□□ 1.63
SYNGR3-206ENST00000618464 C17orf102A2RUQ5 167 aa25.25■■□□□ 1.63
SYNGR3-206ENST00000618464 PFKFB3Q16875 520 aaPredicted RBP25.25■■□□□ 1.63
SYNGR3-206ENST00000618464 ANO3Q9BYT9 981 aa25.25■■□□□ 1.63
SYNGR3-206ENST00000618464 AGXT2Q9BYV1 514 aa25.25■■□□□ 1.63
SYNGR3-206ENST00000618464 NID2Q14112 1375 aa25.25■■□□□ 1.63
SYNGR3-206ENST00000618464 SCG2P13521 617 aa25.24■■□□□ 1.63
SYNGR3-206ENST00000618464 ATP2A2P16615 1042 aaKnown RBP25.24■■□□□ 1.63
SYNGR3-206ENST00000618464 RBL2Q08999 1139 aa25.24■■□□□ 1.63
SYNGR3-206ENST00000618464 TRIM71Q2Q1W2 868 aaKnown RBP25.24■■□□□ 1.63
SYNGR3-206ENST00000618464 RUFY3Q7L099 469 aa25.24■■□□□ 1.63
SYNGR3-206ENST00000618464 FBXL16Q8N461 479 aa25.24■■□□□ 1.63
SYNGR3-206ENST00000618464 ATP6V0A1Q93050 837 aa25.24■■□□□ 1.63
SYNGR3-206ENST00000618464 PHKBQ93100 1093 aa25.24■■□□□ 1.63
SYNGR3-206ENST00000618464 EPB41L2O43491 1005 aaKnown RBP25.23■■□□□ 1.63
SYNGR3-206ENST00000618464 FOSP01100 380 aaPredicted RBP25.23■■□□□ 1.63
SYNGR3-206ENST00000618464 IGFBP4P22692 258 aa25.23■■□□□ 1.63
SYNGR3-206ENST00000618464 CCT2P78371 535 aaKnown RBP25.23■■□□□ 1.63
SYNGR3-206ENST00000618464 GPNMBQ14956 572 aa25.23■■□□□ 1.63
SYNGR3-206ENST00000618464 ZNF618Q5T7W0 954 aa25.23■■□□□ 1.63
SYNGR3-206ENST00000618464 TET1Q8NFU7 2136 aa25.23■■□□□ 1.63
SYNGR3-206ENST00000618464 CYP2W1Q8TAV3 490 aa25.23■■□□□ 1.63
SYNGR3-206ENST00000618464 MXRA8Q9BRK3 442 aa25.23■■□□□ 1.63
SYNGR3-206ENST00000618464 NCOA5Q9HCD5 579 aaKnown RBP25.23■■□□□ 1.63
SYNGR3-206ENST00000618464 ZSWIM6Q9HCJ5 1215 aa25.23■■□□□ 1.63
SYNGR3-206ENST00000618464 ZNF215Q9UL58 517 aaPredicted RBP25.23■■□□□ 1.63
SYNGR3-206ENST00000618464 PCDHA11Q9Y5I1 949 aa25.23■■□□□ 1.63
SYNGR3-206ENST00000618464 PDIA3P30101 505 aaKnown RBP25.22■■□□□ 1.63
SYNGR3-206ENST00000618464 TCF7P36402 384 aaPredicted RBP25.22■■□□□ 1.63
SYNGR3-206ENST00000618464 TOB2Q14106 344 aaPredicted RBP25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms