RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 SNX29Q8TEQ0 813 aa18.82■□□□□ 0.6
TRAPPC3-210ENST00000617904 CRYGNQ8WXF5 182 aa18.82■□□□□ 0.6
TRAPPC3-210ENST00000617904 DPF3Q92784 378 aa18.82■□□□□ 0.6
TRAPPC3-210ENST00000617904 PAGE5Q96GU1 130 aa18.82■□□□□ 0.6
TRAPPC3-210ENST00000617904 WDR11Q9BZH6 1224 aa18.82■□□□□ 0.6
TRAPPC3-210ENST00000617904 KCNMB3Q9NPA1 279 aa18.82■□□□□ 0.6
TRAPPC3-210ENST00000617904 HOMER2Q9NSB8 354 aa18.82■□□□□ 0.6
TRAPPC3-210ENST00000617904 BMP2KQ9NSY1 1161 aaPredicted RBP18.82■□□□□ 0.6
TRAPPC3-210ENST00000617904 PCDHA5Q9Y5H7 936 aa18.82■□□□□ 0.6
TRAPPC3-210ENST00000617904 PPP1R2P41236 205 aa18.81■□□□□ 0.6
TRAPPC3-210ENST00000617904 AFMP43652 599 aa18.81■□□□□ 0.6
TRAPPC3-210ENST00000617904 GCLCP48506 637 aaPredicted RBP18.81■□□□□ 0.6
TRAPPC3-210ENST00000617904 KARSQ15046 597 aaKnown RBP18.81■□□□□ 0.6
TRAPPC3-210ENST00000617904 ARHGEF16Q5VV41 709 aa18.81■□□□□ 0.6
TRAPPC3-210ENST00000617904 USP49Q70CQ1 688 aa18.81■□□□□ 0.6
TRAPPC3-210ENST00000617904 SV2BQ7L1I2 683 aa18.81■□□□□ 0.6
TRAPPC3-210ENST00000617904 PLA2G4DQ86XP0 818 aa18.81■□□□□ 0.6
TRAPPC3-210ENST00000617904 CLEC4DQ8WXI8 215 aa18.81■□□□□ 0.6
TRAPPC3-210ENST00000617904 TRIM44Q96DX7 344 aaPredicted RBP18.81■□□□□ 0.6
TRAPPC3-210ENST00000617904 ASCC2Q9H1I8 757 aaPredicted RBP18.81■□□□□ 0.6
TRAPPC3-210ENST00000617904 PFASO15067 1338 aa18.81■□□□□ 0.6
TRAPPC3-210ENST00000617904 SLC25A27O95847 323 aa18.8■□□□□ 0.6
TRAPPC3-210ENST00000617904 CCT6AP40227 531 aaKnown RBP18.8■□□□□ 0.6
TRAPPC3-210ENST00000617904 STIM1Q13586 685 aa18.8■□□□□ 0.6
TRAPPC3-210ENST00000617904 CEP55Q53EZ4 464 aa18.8■□□□□ 0.6
TRAPPC3-210ENST00000617904 NT5DC1Q5TFE4 455 aa18.8■□□□□ 0.6
TRAPPC3-210ENST00000617904 HTATIP2Q9BUP3 242 aa18.8■□□□□ 0.6
TRAPPC3-210ENST00000617904 CBX8Q9HC52 389 aa18.8■□□□□ 0.6
TRAPPC3-210ENST00000617904 CEP290O15078 2479 aa18.8■□□□□ 0.6
TRAPPC3-210ENST00000617904 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC3-210ENST00000617904 SPDYE16A6NNV3 312 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC3-210ENST00000617904 STAM2O75886 525 aa18.79■□□□□ 0.6
TRAPPC3-210ENST00000617904 FARP2O94887 1054 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC3-210ENST00000617904 PLCB2Q00722 1185 aa18.79■□□□□ 0.6
TRAPPC3-210ENST00000617904 MDM2Q00987 491 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC3-210ENST00000617904 E2F4Q16254 413 aa18.79■□□□□ 0.6
TRAPPC3-210ENST00000617904 PCNX4Q63HM2 1172 aa18.79■□□□□ 0.6
TRAPPC3-210ENST00000617904 LBX2Q6XYB7 198 aa18.79■□□□□ 0.6
TRAPPC3-210ENST00000617904 SH3RF1Q7Z6J0 888 aa18.79■□□□□ 0.6
TRAPPC3-210ENST00000617904 NLRX1Q86UT6 975 aa18.79■□□□□ 0.6
TRAPPC3-210ENST00000617904 SYTL5Q8TDW5 730 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC3-210ENST00000617904 NSUN6Q8TEA1 469 aaKnown RBP18.79■□□□□ 0.6
TRAPPC3-210ENST00000617904 MXRA8Q9BRK3 442 aa18.79■□□□□ 0.6
TRAPPC3-210ENST00000617904 PAK6Q9NQU5 681 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC3-210ENST00000617904 GJD2Q9UKL4 321 aa18.79■□□□□ 0.6
TRAPPC3-210ENST00000617904 BIN1O00499 593 aa18.78■□□□□ 0.6
TRAPPC3-210ENST00000617904 NFIBO00712 420 aa18.78■□□□□ 0.6
TRAPPC3-210ENST00000617904 MAFGO15525 162 aa18.78■□□□□ 0.6
TRAPPC3-210ENST00000617904 GAS7O60861 476 aa18.78■□□□□ 0.6
TRAPPC3-210ENST00000617904 PLCG1P19174 1290 aa18.78■□□□□ 0.6
TRAPPC3-210ENST00000617904 CCND2P30279 289 aa18.78■□□□□ 0.6
TRAPPC3-210ENST00000617904 RPS6P62753 249 aaKnown RBP18.78■□□□□ 0.6
TRAPPC3-210ENST00000617904 PDXDC2PQ6P474 469 aa18.78■□□□□ 0.6
TRAPPC3-210ENST00000617904 CHRDL2Q6WN34 429 aa18.78■□□□□ 0.6
TRAPPC3-210ENST00000617904 CDHR1Q96JP9 859 aa18.78■□□□□ 0.6
TRAPPC3-210ENST00000617904 DEFB118Q96PH6 123 aa18.78■□□□□ 0.6
TRAPPC3-210ENST00000617904 RMDN3Q96TC7 470 aa18.78■□□□□ 0.6
TRAPPC3-210ENST00000617904 TEKT3Q9BXF9 490 aa18.78■□□□□ 0.6
TRAPPC3-210ENST00000617904 MORF4L1Q9UBU8 362 aa18.78■□□□□ 0.6
TRAPPC3-210ENST00000617904 ZNF214Q9UL59 606 aaPredicted RBP18.78■□□□□ 0.6
TRAPPC3-210ENST00000617904 IKBKBO14920 756 aa18.77■□□□□ 0.6
TRAPPC3-210ENST00000617904 CAPN2P17655 700 aa18.77■□□□□ 0.6
TRAPPC3-210ENST00000617904 MUTP22033 750 aa18.77■□□□□ 0.6
TRAPPC3-210ENST00000617904 TMEM132BQ14DG7 1078 aa18.77■□□□□ 0.6
TRAPPC3-210ENST00000617904 LRCH2Q5VUJ6 765 aa18.77■□□□□ 0.6
TRAPPC3-210ENST00000617904 RIOX2Q8IUF8 465 aa18.77■□□□□ 0.6
TRAPPC3-210ENST00000617904 REPS2Q8NFH8 660 aa18.77■□□□□ 0.6
TRAPPC3-210ENST00000617904 ETNPPLQ8TBG4 499 aa18.77■□□□□ 0.6
TRAPPC3-210ENST00000617904 NEK9Q8TD19 979 aa18.77■□□□□ 0.6
TRAPPC3-210ENST00000617904 HAS1Q92839 578 aa18.77■□□□□ 0.6
TRAPPC3-210ENST00000617904 RIT2Q99578 217 aa18.77■□□□□ 0.6
TRAPPC3-210ENST00000617904 ZNF577Q9BSK1 485 aa18.77■□□□□ 0.6
TRAPPC3-210ENST00000617904 CRISPLD2Q9H0B8 497 aa18.77■□□□□ 0.6
TRAPPC3-210ENST00000617904 ADD3Q9UEY8 706 aaKnown RBP18.77■□□□□ 0.6
TRAPPC3-210ENST00000617904 RPTORQ8N122 1335 aa18.77■□□□□ 0.6
TRAPPC3-210ENST00000617904 PP2D1A8MPX8 630 aa18.76■□□□□ 0.59
TRAPPC3-210ENST00000617904 GOLGA6L6A8MZA4 724 aa18.76■□□□□ 0.59
TRAPPC3-210ENST00000617904 MEIS1O00470 390 aa18.76■□□□□ 0.59
TRAPPC3-210ENST00000617904 TFRCP02786 760 aaKnown RBP18.76■□□□□ 0.59
TRAPPC3-210ENST00000617904 SARSP49591 514 aaKnown RBP18.76■□□□□ 0.59
TRAPPC3-210ENST00000617904 CCNA1P78396 465 aa18.76■□□□□ 0.59
TRAPPC3-210ENST00000617904 DPYDQ12882 1025 aa18.76■□□□□ 0.59
TRAPPC3-210ENST00000617904 GNPTABQ3T906 1256 aa18.76■□□□□ 0.59
TRAPPC3-210ENST00000617904 MUM1L1Q5H9M0 696 aa18.76■□□□□ 0.59
TRAPPC3-210ENST00000617904 NCAPH2Q6IBW4 605 aa18.76■□□□□ 0.59
TRAPPC3-210ENST00000617904 ANKRD35Q8N283 1001 aa18.76■□□□□ 0.59
TRAPPC3-210ENST00000617904 DNERQ8NFT8 737 aa18.76■□□□□ 0.59
TRAPPC3-210ENST00000617904 SPATA20Q8TB22 786 aa18.76■□□□□ 0.59
TRAPPC3-210ENST00000617904 TBC1D5Q92609 795 aa18.76■□□□□ 0.59
TRAPPC3-210ENST00000617904 LARP4BQ92615 738 aaKnown RBP18.76■□□□□ 0.59
TRAPPC3-210ENST00000617904 P2RX7Q99572 595 aaKnown RBP18.76■□□□□ 0.59
TRAPPC3-210ENST00000617904 TBC1D22BQ9NU19 505 aa18.76■□□□□ 0.59
TRAPPC3-210ENST00000617904 KBTBD4Q9NVX7 518 aa18.76■□□□□ 0.59
TRAPPC3-210ENST00000617904 MAN1B1Q9UKM7 699 aa18.76■□□□□ 0.59
TRAPPC3-210ENST00000617904 FRMPD4Q14CM0 1322 aa18.76■□□□□ 0.59
TRAPPC3-210ENST00000617904 MYH7BA7E2Y1 1941 aa18.76■□□□□ 0.59
TRAPPC3-210ENST00000617904 PLXNB2O15031 1838 aa18.76■□□□□ 0.59
TRAPPC3-210ENST00000617904 A0A087X0B3 334 aa18.75■□□□□ 0.59
TRAPPC3-210ENST00000617904 POTEMA6NI47 508 aa18.75■□□□□ 0.59
TRAPPC3-210ENST00000617904 FAM86B1E9PN63 330 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms