RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 PHACTR2O75167 634 aa15.37■□□□□ 0.05
CACNA1C-231ENST00000616390 MOCS3O95396 460 aa15.37■□□□□ 0.05
CACNA1C-231ENST00000616390 PPP1R2P41236 205 aa15.37■□□□□ 0.05
CACNA1C-231ENST00000616390 ICA1Q05084 483 aa15.37■□□□□ 0.05
CACNA1C-231ENST00000616390 TMEM119Q4V9L6 283 aa15.37■□□□□ 0.05
CACNA1C-231ENST00000616390 SH3BP5LQ7L8J4 393 aa15.37■□□□□ 0.05
CACNA1C-231ENST00000616390 TRAPPC11Q7Z392 1133 aa15.37■□□□□ 0.05
CACNA1C-231ENST00000616390 FAM198AQ9UFP1 575 aa15.37■□□□□ 0.05
CACNA1C-231ENST00000616390 SUGT1Q9Y2Z0 365 aa15.37■□□□□ 0.05
CACNA1C-231ENST00000616390 EIF3CLB5ME19 914 aaKnown RBP15.37■□□□□ 0.05
CACNA1C-231ENST00000616390 PSMD14O00487 310 aa15.37■□□□□ 0.05
CACNA1C-231ENST00000616390 APBA3O96018 575 aa15.37■□□□□ 0.05
CACNA1C-231ENST00000616390 PLA2G4BP0C869 781 aa15.37■□□□□ 0.05
CACNA1C-231ENST00000616390 CXCR5P32302 372 aa15.37■□□□□ 0.05
CACNA1C-231ENST00000616390 MATR3P43243 847 aaKnown RBP eCLIP15.37■□□□□ 0.05
CACNA1C-231ENST00000616390 ORC2Q13416 577 aaPredicted RBP15.37■□□□□ 0.05
CACNA1C-231ENST00000616390 BEND6Q5SZJ8 279 aaPredicted RBP15.37■□□□□ 0.05
CACNA1C-231ENST00000616390 EIF3CQ99613 913 aaKnown RBP15.37■□□□□ 0.05
CACNA1C-231ENST00000616390 SIK3Q9Y2K2 1263 aa15.37■□□□□ 0.05
CACNA1C-231ENST00000616390 N4BP1O75113 896 aaKnown RBP15.36■□□□□ 0.05
CACNA1C-231ENST00000616390 MED24O75448 989 aa15.36■□□□□ 0.05
CACNA1C-231ENST00000616390 CHRNA5P30532 468 aa15.36■□□□□ 0.05
CACNA1C-231ENST00000616390 PDE6BP35913 854 aa15.36■□□□□ 0.05
CACNA1C-231ENST00000616390 KIF11P52732 1056 aa15.36■□□□□ 0.05
CACNA1C-231ENST00000616390 PSMC6P62333 389 aa15.36■□□□□ 0.05
CACNA1C-231ENST00000616390 CYP4A11Q02928 519 aa15.36■□□□□ 0.05
CACNA1C-231ENST00000616390 NEK11Q8NG66 645 aa15.36■□□□□ 0.05
CACNA1C-231ENST00000616390 MASTLQ96GX5 879 aa15.36■□□□□ 0.05
CACNA1C-231ENST00000616390 PI4KBQ9UBF8 816 aa15.36■□□□□ 0.05
CACNA1C-231ENST00000616390 ARFGEF1Q9Y6D6 1849 aa15.36■□□□□ 0.05
CACNA1C-231ENST00000616390 F5H6K3 240 aa15.36■□□□□ 0.05
CACNA1C-231ENST00000616390 H3BQF6 201 aa15.36■□□□□ 0.05
CACNA1C-231ENST00000616390 ECE2O60344 883 aa15.36■□□□□ 0.05
CACNA1C-231ENST00000616390 ERLIN1O75477 346 aa15.36■□□□□ 0.05
CACNA1C-231ENST00000616390 FGFR1OPO95684 399 aaKnown RBP15.36■□□□□ 0.05
CACNA1C-231ENST00000616390 GFPT1Q06210 699 aaPredicted RBP15.36■□□□□ 0.05
CACNA1C-231ENST00000616390 KLRC3Q07444 240 aa15.36■□□□□ 0.05
CACNA1C-231ENST00000616390 PABPC4Q13310 644 aaKnown RBP eCLIP15.36■□□□□ 0.05
CACNA1C-231ENST00000616390 TUBB2AQ13885 445 aa15.36■□□□□ 0.05
CACNA1C-231ENST00000616390 AOC3Q16853 763 aa15.36■□□□□ 0.05
CACNA1C-231ENST00000616390 LRRC55Q6ZSA7 311 aa15.36■□□□□ 0.05
CACNA1C-231ENST00000616390 CCDC170Q8IYT3 715 aa15.36■□□□□ 0.05
CACNA1C-231ENST00000616390 P2RX7Q99572 595 aaKnown RBP15.36■□□□□ 0.05
CACNA1C-231ENST00000616390 TUBB2BQ9BVA1 445 aa15.36■□□□□ 0.05
CACNA1C-231ENST00000616390 PCDHA13Q9Y5I0 950 aa15.36■□□□□ 0.05
CACNA1C-231ENST00000616390 CAPN6Q9Y6Q1 641 aa15.36■□□□□ 0.05
CACNA1C-231ENST00000616390 BUB1O43683 1085 aa15.35■□□□□ 0.05
CACNA1C-231ENST00000616390 LRRC63Q05C16 580 aa15.35■□□□□ 0.05
CACNA1C-231ENST00000616390 C2orf54Q08AI8 447 aa15.35■□□□□ 0.05
CACNA1C-231ENST00000616390 CYP2W1Q8TAV3 490 aa15.35■□□□□ 0.05
CACNA1C-231ENST00000616390 PLAGL2Q9UPG8 496 aa15.35■□□□□ 0.05
CACNA1C-231ENST00000616390 TNNT3P45378 269 aaPredicted RBP15.35■□□□□ 0.05
CACNA1C-231ENST00000616390 VAV2P52735 878 aa15.35■□□□□ 0.05
CACNA1C-231ENST00000616390 PPP1R18Q6NYC8 613 aa15.35■□□□□ 0.05
CACNA1C-231ENST00000616390 GSPT2Q8IYD1 628 aaKnown RBP15.35■□□□□ 0.05
CACNA1C-231ENST00000616390 MSANTD4Q8NCY6 345 aa15.35■□□□□ 0.05
CACNA1C-231ENST00000616390 SGSM3Q96HU1 749 aa15.35■□□□□ 0.05
CACNA1C-231ENST00000616390 CCDC17Q96LX7 622 aa15.35■□□□□ 0.05
CACNA1C-231ENST00000616390 BCAS3Q9H6U6 928 aa15.35■□□□□ 0.05
CACNA1C-231ENST00000616390 SMARCAL1Q9NZC9 954 aa15.35■□□□□ 0.05
CACNA1C-231ENST00000616390 FAM170AA1A519 330 aa15.35■□□□□ 0.05
CACNA1C-231ENST00000616390 ATP8B1O43520 1251 aa15.35■□□□□ 0.05
CACNA1C-231ENST00000616390 GH2P01242 217 aa15.35■□□□□ 0.05
CACNA1C-231ENST00000616390 JAG1P78504 1218 aa15.35■□□□□ 0.05
CACNA1C-231ENST00000616390 FKBP3Q00688 224 aaKnown RBP15.35■□□□□ 0.05
CACNA1C-231ENST00000616390 RASSF7Q02833 373 aa15.35■□□□□ 0.05
CACNA1C-231ENST00000616390 ABCB5Q2M3G0 1257 aa15.35■□□□□ 0.05
CACNA1C-231ENST00000616390 SIAH1Q8IUQ4 282 aa15.35■□□□□ 0.05
CACNA1C-231ENST00000616390 CCDC102AQ96A19 550 aa15.35■□□□□ 0.05
CACNA1C-231ENST00000616390 ZDHHC15Q96MV8 337 aa15.35■□□□□ 0.05
CACNA1C-231ENST00000616390 LRRC27Q9C0I9 530 aa15.35■□□□□ 0.05
CACNA1C-231ENST00000616390 ATF5Q9Y2D1 282 aaPredicted RBP15.35■□□□□ 0.05
CACNA1C-231ENST00000616390 COL4A3BPQ9Y5P4 624 aa15.35■□□□□ 0.05
CACNA1C-231ENST00000616390 POTEB2H3BUK9 544 aa15.34■□□□□ 0.05
CACNA1C-231ENST00000616390 MEIS2O14770 477 aa15.34■□□□□ 0.05
CACNA1C-231ENST00000616390 USO1O60763 962 aaKnown RBP15.34■□□□□ 0.05
CACNA1C-231ENST00000616390 EPS15P42566 896 aa15.34■□□□□ 0.05
CACNA1C-231ENST00000616390 POLR2FP61218 127 aaKnown RBP15.34■□□□□ 0.05
CACNA1C-231ENST00000616390 UBXN2AP68543 259 aa15.34■□□□□ 0.05
CACNA1C-231ENST00000616390 ARHGAP4P98171 946 aa15.34■□□□□ 0.05
CACNA1C-231ENST00000616390 KCNMA1Q12791 1236 aa15.34■□□□□ 0.05
CACNA1C-231ENST00000616390 HDXQ7Z353 690 aa15.34■□□□□ 0.05
CACNA1C-231ENST00000616390 PODNQ7Z5L7 613 aa15.34■□□□□ 0.05
CACNA1C-231ENST00000616390 CCDC84Q86UT8 332 aaPredicted RBP15.34■□□□□ 0.05
CACNA1C-231ENST00000616390 CCDC65Q8IXS2 484 aa15.34■□□□□ 0.05
CACNA1C-231ENST00000616390 NT5C3AQ9H0P0 336 aa15.34■□□□□ 0.05
CACNA1C-231ENST00000616390 EMILIN3Q9NT22 766 aa15.34■□□□□ 0.05
CACNA1C-231ENST00000616390 EHD2Q9NZN4 543 aa15.34■□□□□ 0.05
CACNA1C-231ENST00000616390 LTBP1Q14766 1721 aa15.34■□□□□ 0.05
CACNA1C-231ENST00000616390 PDE2AO00408 941 aaPredicted RBP15.34■□□□□ 0.05
CACNA1C-231ENST00000616390 NCK2O43639 380 aa15.34■□□□□ 0.05
CACNA1C-231ENST00000616390 ZNF76P36508 570 aa15.34■□□□□ 0.05
CACNA1C-231ENST00000616390 MAGEA1P43355 309 aa15.34■□□□□ 0.05
CACNA1C-231ENST00000616390 PSMD2Q13200 908 aa15.34■□□□□ 0.05
CACNA1C-231ENST00000616390 ZYXQ15942 572 aaKnown RBP15.34■□□□□ 0.05
CACNA1C-231ENST00000616390 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.34■□□□□ 0.05
CACNA1C-231ENST00000616390 LSM14BQ9BX40 385 aaKnown RBP15.34■□□□□ 0.05
CACNA1C-231ENST00000616390 VPS18Q9P253 973 aa15.34■□□□□ 0.05
CACNA1C-231ENST00000616390 RAB21Q9UL25 225 aa15.34■□□□□ 0.05
CACNA1C-231ENST00000616390 SPDYE3A6NKU9 549 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms