RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 FAM47EQ6ZV65 393 aa20.39■□□□□ 0.85
SPAST-203ENST00000615843 CXorf56Q9H5V9 222 aa20.39■□□□□ 0.85
SPAST-203ENST00000615843 EMILIN3Q9NT22 766 aa20.39■□□□□ 0.85
SPAST-203ENST00000615843 DNAJC17Q9NVM6 304 aaKnown RBP20.39■□□□□ 0.85
SPAST-203ENST00000615843 TTC37Q6PGP7 1564 aa20.39■□□□□ 0.85
SPAST-203ENST00000615843 GOLGA8QA0A0J9YX86 632 aa20.39■□□□□ 0.85
SPAST-203ENST00000615843 GOLGA8OA6NCC3 632 aa20.39■□□□□ 0.85
SPAST-203ENST00000615843 GOLGA8NF8WBI6 632 aa20.39■□□□□ 0.85
SPAST-203ENST00000615843 SPARCL1Q14515 664 aa20.39■□□□□ 0.85
SPAST-203ENST00000615843 GRAMD1BQ3KR37 738 aa20.39■□□□□ 0.85
SPAST-203ENST00000615843 GREM2Q9H772 168 aa20.39■□□□□ 0.85
SPAST-203ENST00000615843 VIPAS39Q9H9C1 493 aa20.39■□□□□ 0.85
SPAST-203ENST00000615843 DNAJC5BQ9UF47 199 aa20.39■□□□□ 0.85
SPAST-203ENST00000615843 CLIC2O15247 247 aa20.38■□□□□ 0.85
SPAST-203ENST00000615843 GAP43P17677 238 aa20.38■□□□□ 0.85
SPAST-203ENST00000615843 SAT1P21673 171 aa20.38■□□□□ 0.85
SPAST-203ENST00000615843 CASP1P29466 404 aa20.38■□□□□ 0.85
SPAST-203ENST00000615843 XKR9Q5GH70 373 aa20.38■□□□□ 0.85
SPAST-203ENST00000615843 PTPN12Q05209 780 aaKnown RBP20.38■□□□□ 0.85
SPAST-203ENST00000615843 RINT1Q6NUQ1 792 aa20.38■□□□□ 0.85
SPAST-203ENST00000615843 TBC1D22AQ8WUA7 517 aa20.38■□□□□ 0.85
SPAST-203ENST00000615843 TRIM49BA6NDI0 452 aa20.38■□□□□ 0.85
SPAST-203ENST00000615843 GYG2O15488 501 aa20.38■□□□□ 0.85
SPAST-203ENST00000615843 APOEP02649 317 aa20.38■□□□□ 0.85
SPAST-203ENST00000615843 PHKG2P15735 406 aa20.38■□□□□ 0.85
SPAST-203ENST00000615843 TCP10Q12799 353 aa20.38■□□□□ 0.85
SPAST-203ENST00000615843 DPP8Q6V1X1 898 aaPredicted RBP20.38■□□□□ 0.85
SPAST-203ENST00000615843 NLRX1Q86UT6 975 aa20.38■□□□□ 0.85
SPAST-203ENST00000615843 RFX6Q8HWS3 928 aa20.38■□□□□ 0.85
SPAST-203ENST00000615843 MAML1Q92585 1016 aa20.38■□□□□ 0.85
SPAST-203ENST00000615843 CHMP6Q96FZ7 201 aa20.38■□□□□ 0.85
SPAST-203ENST00000615843 ATP7AQ04656 1500 aa20.38■□□□□ 0.85
SPAST-203ENST00000615843 GSTA1P08263 222 aa20.38■□□□□ 0.85
SPAST-203ENST00000615843 GSTA2P09210 222 aa20.38■□□□□ 0.85
SPAST-203ENST00000615843 GUCY1A3Q02108 690 aa20.38■□□□□ 0.85
SPAST-203ENST00000615843 DYNC1I2Q13409 638 aaKnown RBP20.38■□□□□ 0.85
SPAST-203ENST00000615843 IQCB1Q15051 598 aa20.38■□□□□ 0.85
SPAST-203ENST00000615843 MRPL46Q9H2W6 279 aaKnown RBP20.38■□□□□ 0.85
SPAST-203ENST00000615843 SPAG7O75391 227 aa20.37■□□□□ 0.85
SPAST-203ENST00000615843 ATP1A1P05023 1023 aaKnown RBP20.37■□□□□ 0.85
SPAST-203ENST00000615843 MTF1Q14872 753 aa20.37■□□□□ 0.85
SPAST-203ENST00000615843 AZI2Q9H6S1 392 aa20.37■□□□□ 0.85
SPAST-203ENST00000615843 DIS3Q9Y2L1 958 aaKnown RBP20.37■□□□□ 0.85
SPAST-203ENST00000615843 CHGBP05060 677 aa20.37■□□□□ 0.85
SPAST-203ENST00000615843 PLS3P13797 630 aa20.37■□□□□ 0.85
SPAST-203ENST00000615843 DRP2Q13474 957 aa20.37■□□□□ 0.85
SPAST-203ENST00000615843 CARD10Q9BWT7 1032 aa20.37■□□□□ 0.85
SPAST-203ENST00000615843 TMEM60Q9H2L4 133 aa20.37■□□□□ 0.85
SPAST-203ENST00000615843 SCINQ9Y6U3 715 aa20.37■□□□□ 0.85
SPAST-203ENST00000615843 RPS8P62241 208 aaKnown RBP20.37■□□□□ 0.85
SPAST-203ENST00000615843 EFHD1Q9BUP0 239 aa20.37■□□□□ 0.85
SPAST-203ENST00000615843 ANLNQ9NQW6 1124 aa20.37■□□□□ 0.85
SPAST-203ENST00000615843 PACSIN2Q9UNF0 486 aaPredicted RBP20.37■□□□□ 0.85
SPAST-203ENST00000615843 CPSF1Q10570 1443 aaKnown RBP20.37■□□□□ 0.85
SPAST-203ENST00000615843 PRR29P0C7W0 189 aa20.37■□□□□ 0.85
SPAST-203ENST00000615843 PI16Q6UXB8 463 aa20.37■□□□□ 0.85
SPAST-203ENST00000615843 DYDC2Q96IM9 177 aa20.37■□□□□ 0.85
SPAST-203ENST00000615843 HAUS8Q9BT25 410 aa20.37■□□□□ 0.85
SPAST-203ENST00000615843 TEKT3Q9BXF9 490 aa20.37■□□□□ 0.85
SPAST-203ENST00000615843 SUFUQ9UMX1 484 aa20.37■□□□□ 0.85
SPAST-203ENST00000615843 ABCA5Q8WWZ7 1642 aa20.37■□□□□ 0.85
SPAST-203ENST00000615843 MAGI3Q5TCQ9 1506 aa20.36■□□□□ 0.85
SPAST-203ENST00000615843 NCK2O43639 380 aa20.36■□□□□ 0.85
SPAST-203ENST00000615843 BIRC2Q13490 618 aa20.36■□□□□ 0.85
SPAST-203ENST00000615843 NME8Q8N427 588 aa20.36■□□□□ 0.85
SPAST-203ENST00000615843 LRRC53A6NM62 1247 aa20.36■□□□□ 0.85
SPAST-203ENST00000615843 ERVV-2B6SEH9 535 aa20.36■□□□□ 0.85
SPAST-203ENST00000615843 PRKAB2O43741 272 aa20.36■□□□□ 0.85
SPAST-203ENST00000615843 PPP1R37O75864 691 aa20.36■□□□□ 0.85
SPAST-203ENST00000615843 FBXO11Q86XK2 927 aa20.36■□□□□ 0.85
SPAST-203ENST00000615843 TAF1DQ9H5J8 278 aaPredicted RBP20.36■□□□□ 0.85
SPAST-203ENST00000615843 ECT2Q9H8V3 914 aa20.36■□□□□ 0.85
SPAST-203ENST00000615843 PSD3Q9NYI0 1048 aa20.36■□□□□ 0.85
SPAST-203ENST00000615843 RPAP1Q9BWH6 1393 aaPredicted RBP20.36■□□□□ 0.85
SPAST-203ENST00000615843 A0A0G2JND7 137 aa20.36■□□□□ 0.85
SPAST-203ENST00000615843 NOP56O00567 594 aaKnown RBP20.36■□□□□ 0.85
SPAST-203ENST00000615843 KRT1P04264 644 aa20.36■□□□□ 0.85
SPAST-203ENST00000615843 TMOD1P28289 359 aa20.36■□□□□ 0.85
SPAST-203ENST00000615843 MAP7D3Q8IWC1 876 aa20.36■□□□□ 0.85
SPAST-203ENST00000615843 NSMCE1Q8WV22 266 aa20.36■□□□□ 0.85
SPAST-203ENST00000615843 OSBPL1AQ9BXW6 950 aa20.36■□□□□ 0.85
SPAST-203ENST00000615843 TOM1L1O75674 476 aa20.36■□□□□ 0.85
SPAST-203ENST00000615843 ZNF710Q8N1W2 664 aa20.36■□□□□ 0.85
SPAST-203ENST00000615843 CEP70Q8NHQ1 597 aa20.36■□□□□ 0.85
SPAST-203ENST00000615843 DPF2Q92785 391 aa20.36■□□□□ 0.85
SPAST-203ENST00000615843 SH3GL3Q99963 347 aa20.36■□□□□ 0.85
SPAST-203ENST00000615843 CEP72Q9P209 647 aa20.36■□□□□ 0.85
SPAST-203ENST00000615843 TTC26A0AVF1 554 aa20.35■□□□□ 0.85
SPAST-203ENST00000615843 TRIM55Q9BYV6 548 aa20.35■□□□□ 0.85
SPAST-203ENST00000615843 IRX2Q9BZI1 471 aaPredicted RBP20.35■□□□□ 0.85
SPAST-203ENST00000615843 SEPT10Q9P0V9 454 aa20.35■□□□□ 0.85
SPAST-203ENST00000615843 PCDHA1Q9Y5I3 950 aa20.35■□□□□ 0.85
SPAST-203ENST00000615843 GRID2IPA4D2P6 1211 aa20.35■□□□□ 0.85
SPAST-203ENST00000615843 RHOT2Q8IXI1 618 aa20.35■□□□□ 0.85
SPAST-203ENST00000615843 TRIML2Q8N7C3 387 aa20.35■□□□□ 0.85
SPAST-203ENST00000615843 THRAP3Q9Y2W1 955 aaKnown RBP20.35■□□□□ 0.85
SPAST-203ENST00000615843 PIK3CAP42336 1068 aa20.35■□□□□ 0.85
SPAST-203ENST00000615843 PMS2P54278 862 aa20.35■□□□□ 0.85
SPAST-203ENST00000615843 GFPT1Q06210 699 aaPredicted RBP20.35■□□□□ 0.85
SPAST-203ENST00000615843 MUM1L1Q5H9M0 696 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms