RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 TAB3Q8N5C8 712 aaPredicted RBP9.79□□□□□ -0.84
PDLIM5-222ENST00000615540 PLVAPQ9BX97 442 aa9.79□□□□□ -0.84
PDLIM5-222ENST00000615540 OSBPL5Q9H0X9 879 aaPredicted RBP9.79□□□□□ -0.84
PDLIM5-222ENST00000615540 PTPN22Q9Y2R2 807 aa9.79□□□□□ -0.84
PDLIM5-222ENST00000615540 LRRIQ4A6NIV6 560 aa9.78□□□□□ -0.84
PDLIM5-222ENST00000615540 GYS2P54840 703 aa9.78□□□□□ -0.84
PDLIM5-222ENST00000615540 EARS2Q5JPH6 523 aaKnown RBP9.78□□□□□ -0.84
PDLIM5-222ENST00000615540 UNC13DQ70J99 1090 aa9.78□□□□□ -0.84
PDLIM5-222ENST00000615540 HAUS4Q9H6D7 363 aa9.78□□□□□ -0.84
PDLIM5-222ENST00000615540 MTMR4Q9NYA4 1195 aa9.78□□□□□ -0.84
PDLIM5-222ENST00000615540 AMFRQ9UKV5 643 aa9.78□□□□□ -0.84
PDLIM5-222ENST00000615540 ZBTB12Q9Y330 459 aaPredicted RBP9.78□□□□□ -0.84
PDLIM5-222ENST00000615540 GCFC2P16383 781 aaKnown RBP9.78□□□□□ -0.84
PDLIM5-222ENST00000615540 CCND2P30279 289 aa9.78□□□□□ -0.84
PDLIM5-222ENST00000615540 PSMC2P35998 433 aaKnown RBP9.78□□□□□ -0.84
PDLIM5-222ENST00000615540 PTPAQ15257 358 aa9.78□□□□□ -0.84
PDLIM5-222ENST00000615540 UAP1Q16222 522 aaPredicted RBP9.78□□□□□ -0.84
PDLIM5-222ENST00000615540 SBK1Q52WX2 424 aa9.78□□□□□ -0.84
PDLIM5-222ENST00000615540 KSR1Q8IVT5 923 aa9.78□□□□□ -0.84
PDLIM5-222ENST00000615540 VGLL2Q8N8G2 317 aa9.78□□□□□ -0.84
PDLIM5-222ENST00000615540 TTC16Q8NEE8 873 aa9.78□□□□□ -0.84
PDLIM5-222ENST00000615540 POMGNT1Q8WZA1 660 aa9.78□□□□□ -0.84
PDLIM5-222ENST00000615540 KIF4AO95239 1232 aa9.78□□□□□ -0.84
PDLIM5-222ENST00000615540 ZBTB33Q86T24 672 aa9.78□□□□□ -0.84
PDLIM5-222ENST00000615540 TRIM10Q9UDY6 481 aa9.78□□□□□ -0.84
PDLIM5-222ENST00000615540 MTUS1Q9ULD2 1270 aa9.78□□□□□ -0.84
PDLIM5-222ENST00000615540 RCSD1Q6JBY9 416 aa9.78□□□□□ -0.84
PDLIM5-222ENST00000615540 NEDD1Q8NHV4 660 aa9.78□□□□□ -0.84
PDLIM5-222ENST00000615540 UHMK1Q8TAS1 419 aaKnown RBP9.78□□□□□ -0.84
PDLIM5-222ENST00000615540 UBE2TQ9NPD8 197 aaPredicted RBP9.78□□□□□ -0.84
PDLIM5-222ENST00000615540 CD44P16070 742 aaKnown RBP9.78□□□□□ -0.84
PDLIM5-222ENST00000615540 SYCE1Q8N0S2 351 aa9.78□□□□□ -0.84
PDLIM5-222ENST00000615540 NUCKS1Q9H1E3 243 aaKnown RBP9.78□□□□□ -0.84
PDLIM5-222ENST00000615540 ANAPC4Q9UJX5 808 aa9.78□□□□□ -0.84
PDLIM5-222ENST00000615540 TFR2Q9UP52 801 aa9.78□□□□□ -0.84
PDLIM5-222ENST00000615540 LIN9Q5TKA1 542 aa9.77□□□□□ -0.84
PDLIM5-222ENST00000615540 CCDC105Q8IYK2 499 aa9.77□□□□□ -0.84
PDLIM5-222ENST00000615540 CSADQ9Y600 493 aa9.77□□□□□ -0.84
PDLIM5-222ENST00000615540 LGALS16A8MUM7 142 aa9.77□□□□□ -0.85
PDLIM5-222ENST00000615540 F5H6K3 240 aa9.77□□□□□ -0.85
PDLIM5-222ENST00000615540 MARK3P27448 753 aa9.77□□□□□ -0.85
PDLIM5-222ENST00000615540 KLRC3Q07444 240 aa9.77□□□□□ -0.85
PDLIM5-222ENST00000615540 CIAPIN1Q6FI81 312 aa9.77□□□□□ -0.85
PDLIM5-222ENST00000615540 MICALL1Q8N3F8 863 aa9.77□□□□□ -0.85
PDLIM5-222ENST00000615540 WDR24Q96S15 920 aa9.77□□□□□ -0.85
PDLIM5-222ENST00000615540 FUCA2Q9BTY2 467 aa9.77□□□□□ -0.85
PDLIM5-222ENST00000615540 MAK16Q9BXY0 300 aaKnown RBP9.77□□□□□ -0.85
PDLIM5-222ENST00000615540 IRX2Q9BZI1 471 aaPredicted RBP9.77□□□□□ -0.85
PDLIM5-222ENST00000615540 DDX41Q9UJV9 622 aaKnown RBP9.77□□□□□ -0.85
PDLIM5-222ENST00000615540 LMO7Q8WWI1 1683 aa9.77□□□□□ -0.85
PDLIM5-222ENST00000615540 PDHBP11177 359 aa9.77□□□□□ -0.85
PDLIM5-222ENST00000615540 PDE6CP51160 858 aa9.77□□□□□ -0.85
PDLIM5-222ENST00000615540 TUBB4BP68371 445 aa9.77□□□□□ -0.85
PDLIM5-222ENST00000615540 PROCA1Q8NCQ7 364 aaPredicted RBP9.77□□□□□ -0.85
PDLIM5-222ENST00000615540 HGSO14964 777 aaPredicted RBP9.77□□□□□ -0.85
PDLIM5-222ENST00000615540 ATP1A2P50993 1020 aa9.77□□□□□ -0.85
PDLIM5-222ENST00000615540 GUCY2DQ02846 1103 aa9.77□□□□□ -0.85
PDLIM5-222ENST00000615540 BRD3Q15059 726 aa9.77□□□□□ -0.85
PDLIM5-222ENST00000615540 MTERF2Q49AM1 385 aa9.77□□□□□ -0.85
PDLIM5-222ENST00000615540 KRT26Q7Z3Y9 468 aa9.77□□□□□ -0.85
PDLIM5-222ENST00000615540 FOXP4Q8IVH2 680 aaPredicted RBP9.77□□□□□ -0.85
PDLIM5-222ENST00000615540 AP1M1Q9BXS5 423 aa9.77□□□□□ -0.85
PDLIM5-222ENST00000615540 KMT5AQ9NQR1 393 aa9.77□□□□□ -0.85
PDLIM5-222ENST00000615540 CEP83Q9Y592 693 aa9.77□□□□□ -0.85
PDLIM5-222ENST00000615540 SETD1AO15047 1707 aaKnown RBP9.77□□□□□ -0.85
PDLIM5-222ENST00000615540 MYL1P05976 194 aa9.77□□□□□ -0.85
PDLIM5-222ENST00000615540 ARHGAP4P98171 946 aa9.77□□□□□ -0.85
PDLIM5-222ENST00000615540 E4F1Q66K89 784 aaPredicted RBP9.77□□□□□ -0.85
PDLIM5-222ENST00000615540 DCPSQ96C86 337 aaKnown RBP9.77□□□□□ -0.85
PDLIM5-222ENST00000615540 DNAI2Q9GZS0 605 aa9.77□□□□□ -0.85
PDLIM5-222ENST00000615540 SLC37A4O43826 429 aa9.76□□□□□ -0.85
PDLIM5-222ENST00000615540 GYS1P13807 737 aa9.76□□□□□ -0.85
PDLIM5-222ENST00000615540 SSTR3P32745 418 aaPredicted RBP9.76□□□□□ -0.85
PDLIM5-222ENST00000615540 ZNF354CQ86Y25 554 aa9.76□□□□□ -0.85
PDLIM5-222ENST00000615540 C10orf67Q8IYJ2 551 aa9.76□□□□□ -0.85
PDLIM5-222ENST00000615540 RTKN2Q8IZC4 609 aa9.76□□□□□ -0.85
PDLIM5-222ENST00000615540 MTRF1LQ9UGC7 380 aaKnown RBP9.76□□□□□ -0.85
PDLIM5-222ENST00000615540 TSKSQ9UJT2 592 aa9.76□□□□□ -0.85
PDLIM5-222ENST00000615540 MRC1P22897 1456 aa9.76□□□□□ -0.85
PDLIM5-222ENST00000615540 FAM205AQ6ZU69 1335 aa9.76□□□□□ -0.85
PDLIM5-222ENST00000615540 IVLP07476 585 aa9.76□□□□□ -0.85
PDLIM5-222ENST00000615540 CALCOCO2Q13137 446 aa9.76□□□□□ -0.85
PDLIM5-222ENST00000615540 GNPTABQ3T906 1256 aa9.76□□□□□ -0.85
PDLIM5-222ENST00000615540 LRP10Q7Z4F1 713 aa9.76□□□□□ -0.85
PDLIM5-222ENST00000615540 SH2D3AQ9BRG2 576 aa9.76□□□□□ -0.85
PDLIM5-222ENST00000615540 PARVGQ9HBI0 331 aa9.76□□□□□ -0.85
PDLIM5-222ENST00000615540 ASIC3Q9UHC3 531 aa9.76□□□□□ -0.85
PDLIM5-222ENST00000615540 PARP4Q9UKK3 1724 aaKnown RBP9.76□□□□□ -0.85
PDLIM5-222ENST00000615540 TTC26A0AVF1 554 aa9.76□□□□□ -0.85
PDLIM5-222ENST00000615540 PKN1Q16512 942 aa9.76□□□□□ -0.85
PDLIM5-222ENST00000615540 DCAF15Q66K64 600 aa9.76□□□□□ -0.85
PDLIM5-222ENST00000615540 KAZNQ674X7 775 aa9.76□□□□□ -0.85
PDLIM5-222ENST00000615540 MGARPQ8TDB4 240 aa9.76□□□□□ -0.85
PDLIM5-222ENST00000615540 IQCDQ96DY2 449 aa9.76□□□□□ -0.85
PDLIM5-222ENST00000615540 CEP170P1Q96L14 293 aa9.76□□□□□ -0.85
PDLIM5-222ENST00000615540 KCNQ5Q9NR82 932 aa9.76□□□□□ -0.85
PDLIM5-222ENST00000615540 IKBKGQ9Y6K9 419 aa9.76□□□□□ -0.85
PDLIM5-222ENST00000615540 CD19P15391 556 aa9.76□□□□□ -0.85
PDLIM5-222ENST00000615540 OSTNP61366 133 aa9.76□□□□□ -0.85
PDLIM5-222ENST00000615540 ZBED6P86452 979 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms