RNA–Protein interactions for RNA: ENST00000615135.4

FAM228B-209, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-209ENST00000615135 RAI14Q9P0K7 980 aa8.55□□□□□ -1.04
FAM228B-209ENST00000615135 MUTYHQ9UIF7 546 aa8.55□□□□□ -1.04
FAM228B-209ENST00000615135 SERPINB13Q9UIV8 391 aa8.55□□□□□ -1.04
FAM228B-209ENST00000615135 TNKSO95271 1327 aa8.54□□□□□ -1.04
FAM228B-209ENST00000615135 TMEM221A6NGB7 291 aa8.54□□□□□ -1.04
FAM228B-209ENST00000615135 H3BQV1 296 aa8.54□□□□□ -1.04
FAM228B-209ENST00000615135 M0R296 226 aa8.54□□□□□ -1.04
FAM228B-209ENST00000615135 BAIAP3O94812 1187 aa8.54□□□□□ -1.04
FAM228B-209ENST00000615135 APPP05067 770 aa8.54□□□□□ -1.04
FAM228B-209ENST00000615135 HSPD1P10809 573 aaKnown RBP8.54□□□□□ -1.04
FAM228B-209ENST00000615135 PDIA4P13667 645 aaKnown RBP8.54□□□□□ -1.04
FAM228B-209ENST00000615135 SYT1P21579 422 aa8.54□□□□□ -1.04
FAM228B-209ENST00000615135 SHMT1P34896 483 aa8.54□□□□□ -1.04
FAM228B-209ENST00000615135 ADD2P35612 726 aa8.54□□□□□ -1.04
FAM228B-209ENST00000615135 STAT3P40763 770 aa8.54□□□□□ -1.04
FAM228B-209ENST00000615135 HAND2P61296 217 aa8.54□□□□□ -1.04
FAM228B-209ENST00000615135 TRDNQ13061 729 aa8.54□□□□□ -1.04
FAM228B-209ENST00000615135 TOB2Q14106 344 aaPredicted RBP8.54□□□□□ -1.04
FAM228B-209ENST00000615135 TSGA10IPQ3SY00 556 aa8.54□□□□□ -1.04
FAM228B-209ENST00000615135 CXCL17Q6UXB2 119 aa8.54□□□□□ -1.04
FAM228B-209ENST00000615135 PI16Q6UXB8 463 aa8.54□□□□□ -1.04
FAM228B-209ENST00000615135 ASCL5Q7RTU5 278 aa8.54□□□□□ -1.04
FAM228B-209ENST00000615135 RNF135Q8IUD6 432 aa8.54□□□□□ -1.04
FAM228B-209ENST00000615135 ATOH1Q92858 354 aaPredicted RBP8.54□□□□□ -1.04
FAM228B-209ENST00000615135 BRF1Q92994 677 aa8.54□□□□□ -1.04
FAM228B-209ENST00000615135 PABPC5Q96DU9 382 aaKnown RBP8.54□□□□□ -1.04
FAM228B-209ENST00000615135 KATNBL1Q9H079 304 aa8.54□□□□□ -1.04
FAM228B-209ENST00000615135 LMBRD1Q9NUN5 540 aa8.54□□□□□ -1.04
FAM228B-209ENST00000615135 FAM86C1Q9NVL1 165 aa8.54□□□□□ -1.04
FAM228B-209ENST00000615135 ZHX1Q9UKY1 873 aaPredicted RBP8.54□□□□□ -1.04
FAM228B-209ENST00000615135 BRPF3Q9ULD4 1205 aa8.54□□□□□ -1.04
FAM228B-209ENST00000615135 TPCN1Q9ULQ1 816 aa8.54□□□□□ -1.04
FAM228B-209ENST00000615135 ZDHHC9Q9Y397 364 aa8.54□□□□□ -1.04
FAM228B-209ENST00000615135 PTPRSQ13332 1948 aa8.54□□□□□ -1.04
FAM228B-209ENST00000615135 COL11A1P12107 1806 aaPredicted RBP8.54□□□□□ -1.04
FAM228B-209ENST00000615135 ASTN1O14525 1302 aa8.54□□□□□ -1.04
FAM228B-209ENST00000615135 SIP14410 1827 aa8.53□□□□□ -1.04
FAM228B-209ENST00000615135 LCHNA4D1U4 455 aa8.53□□□□□ -1.04
FAM228B-209ENST00000615135 PRR23AA6NEV1 266 aa8.53□□□□□ -1.04
FAM228B-209ENST00000615135 GOLGA8BA8MQT2 603 aa8.53□□□□□ -1.04
FAM228B-209ENST00000615135 E7EWF7 191 aa8.53□□□□□ -1.04
FAM228B-209ENST00000615135 H3BQ06 376 aaPredicted RBP8.53□□□□□ -1.04
FAM228B-209ENST00000615135 NR1I2O75469 434 aa8.53□□□□□ -1.04
FAM228B-209ENST00000615135 FLOT1O75955 427 aa8.53□□□□□ -1.04
FAM228B-209ENST00000615135 CHGBP05060 677 aa8.53□□□□□ -1.04
FAM228B-209ENST00000615135 SUPT20HL2P0C7V6 817 aa8.53□□□□□ -1.04
FAM228B-209ENST00000615135 PDE6AP16499 860 aa8.53□□□□□ -1.04
FAM228B-209ENST00000615135 KRT85P78386 507 aa8.53□□□□□ -1.04
FAM228B-209ENST00000615135 SEPT2Q15019 361 aa8.53□□□□□ -1.04
FAM228B-209ENST00000615135 SMAD2Q15796 467 aaKnown RBP8.53□□□□□ -1.04
FAM228B-209ENST00000615135 ZSCAN23Q3MJ62 389 aa8.53□□□□□ -1.04
FAM228B-209ENST00000615135 SLFNL1Q499Z3 407 aa8.53□□□□□ -1.04
FAM228B-209ENST00000615135 NAA16Q6N069 864 aaPredicted RBP8.53□□□□□ -1.04
FAM228B-209ENST00000615135 DEFB128Q7Z7B8 93 aa8.53□□□□□ -1.04
FAM228B-209ENST00000615135 ADGRA1Q86SQ6 560 aa8.53□□□□□ -1.04
FAM228B-209ENST00000615135 SUGP1Q8IWZ8 645 aaKnown RBP8.53□□□□□ -1.04
FAM228B-209ENST00000615135 REPS2Q8NFH8 660 aa8.53□□□□□ -1.04
FAM228B-209ENST00000615135 ZNF516Q92618 1163 aa8.53□□□□□ -1.04
FAM228B-209ENST00000615135 ZNF512BQ96KM6 892 aaPredicted RBP8.53□□□□□ -1.04
FAM228B-209ENST00000615135 TGS1Q96RS0 853 aaKnown RBP8.53□□□□□ -1.04
FAM228B-209ENST00000615135 POP1Q99575 1024 aaKnown RBP8.53□□□□□ -1.04
FAM228B-209ENST00000615135 PRR14Q9BWN1 585 aa8.53□□□□□ -1.04
FAM228B-209ENST00000615135 LRRC2Q9BYS8 371 aa8.53□□□□□ -1.04
FAM228B-209ENST00000615135 ALDH8A1Q9H2A2 487 aaPredicted RBP8.53□□□□□ -1.04
FAM228B-209ENST00000615135 MAP10Q9P2G4 905 aa8.53□□□□□ -1.04
FAM228B-209ENST00000615135 LRP2BPQ9P2M1 347 aa8.53□□□□□ -1.04
FAM228B-209ENST00000615135 SAP30BPQ9UHR5 308 aaKnown RBP8.53□□□□□ -1.04
FAM228B-209ENST00000615135 ZNF214Q9UL59 606 aaPredicted RBP8.53□□□□□ -1.04
FAM228B-209ENST00000615135 GNEQ9Y223 722 aaKnown RBP8.53□□□□□ -1.04
FAM228B-209ENST00000615135 MCM3APO60318 1980 aa8.53□□□□□ -1.04
FAM228B-209ENST00000615135 ZNF532Q9HCE3 1301 aa8.53□□□□□ -1.04
FAM228B-209ENST00000615135 MYH4Q9Y623 1939 aa8.52□□□□□ -1.04
FAM228B-209ENST00000615135 MYO7AQ13402 2215 aa8.52□□□□□ -1.05
FAM228B-209ENST00000615135 ATRXP46100 2492 aa8.52□□□□□ -1.05
FAM228B-209ENST00000615135 FSD2A1L4K1 749 aa8.52□□□□□ -1.05
FAM228B-209ENST00000615135 VWA5AO00534 786 aa8.52□□□□□ -1.05
FAM228B-209ENST00000615135 ZNF213O14771 459 aa8.52□□□□□ -1.05
FAM228B-209ENST00000615135 NBL1P41271 181 aa8.52□□□□□ -1.05
FAM228B-209ENST00000615135 TDO2P48775 406 aa8.52□□□□□ -1.05
FAM228B-209ENST00000615135 NASPP49321 788 aaPredicted RBP8.52□□□□□ -1.05
FAM228B-209ENST00000615135 HMGN5P82970 282 aaKnown RBP8.52□□□□□ -1.05
FAM228B-209ENST00000615135 BEX3Q00994 111 aa8.52□□□□□ -1.05
FAM228B-209ENST00000615135 GABPAQ06546 454 aa8.52□□□□□ -1.05
FAM228B-209ENST00000615135 ST3GAL1Q11201 340 aa8.52□□□□□ -1.05
FAM228B-209ENST00000615135 SLC9C2Q5TAH2 1124 aa8.52□□□□□ -1.05
FAM228B-209ENST00000615135 LARP1BQ659C4 914 aaKnown RBP8.52□□□□□ -1.05
FAM228B-209ENST00000615135 STOX1Q6ZVD7 989 aa8.52□□□□□ -1.05
FAM228B-209ENST00000615135 DHX32Q7L7V1 743 aaKnown RBP8.52□□□□□ -1.05
FAM228B-209ENST00000615135 TTC6Q86TZ1 520 aa8.52□□□□□ -1.05
FAM228B-209ENST00000615135 SIAH1Q8IUQ4 282 aa8.52□□□□□ -1.05
FAM228B-209ENST00000615135 NCOA7Q8NI08 942 aa8.52□□□□□ -1.05
FAM228B-209ENST00000615135 GLMNQ92990 594 aa8.52□□□□□ -1.05
FAM228B-209ENST00000615135 OSBP2Q969R2 916 aa8.52□□□□□ -1.05
FAM228B-209ENST00000615135 MRPL38Q96DV4 380 aaKnown RBP8.52□□□□□ -1.05
FAM228B-209ENST00000615135 TRIM44Q96DX7 344 aaPredicted RBP8.52□□□□□ -1.05
FAM228B-209ENST00000615135 FGD4Q96M96 766 aa8.52□□□□□ -1.05
FAM228B-209ENST00000615135 NAPBQ9H115 298 aa8.52□□□□□ -1.05
FAM228B-209ENST00000615135 PIH1D3Q9NQM4 214 aaKnown RBP8.52□□□□□ -1.05
FAM228B-209ENST00000615135 TAF6LQ9Y6J9 622 aa8.52□□□□□ -1.05
FAM228B-209ENST00000615135 EP300Q09472 2414 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms