RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 TAF1DQ9H5J8 278 aaPredicted RBP11.07□□□□□ -0.64
GGA3-221ENST00000614198 PUF60Q9UHX1 559 aaKnown RBP11.07□□□□□ -0.64
GGA3-221ENST00000614198 ZNF112Q9UJU3 913 aa11.07□□□□□ -0.64
GGA3-221ENST00000614198 CCPG1Q9ULG6 757 aa11.07□□□□□ -0.64
GGA3-221ENST00000614198 GOLGA6L9A6NEM1 432 aa11.07□□□□□ -0.64
GGA3-221ENST00000614198 KIF1CO43896 1103 aaKnown RBP11.07□□□□□ -0.64
GGA3-221ENST00000614198 MRPL12P52815 198 aaKnown RBP11.07□□□□□ -0.64
GGA3-221ENST00000614198 UBASH3AP57075 661 aa11.07□□□□□ -0.64
GGA3-221ENST00000614198 CUL4BQ13620 913 aa11.07□□□□□ -0.64
GGA3-221ENST00000614198 NAALADL2Q58DX5 795 aa11.07□□□□□ -0.64
GGA3-221ENST00000614198 TRMT44Q8IYL2 757 aaKnown RBP11.07□□□□□ -0.64
GGA3-221ENST00000614198 MMTAG2Q9BU76 263 aaKnown RBP11.07□□□□□ -0.64
GGA3-221ENST00000614198 DDX25Q9UHL0 483 aaKnown RBP11.07□□□□□ -0.64
GGA3-221ENST00000614198 A0A087WUV0 522 aaPredicted RBP11.06□□□□□ -0.64
GGA3-221ENST00000614198 CALCRLQ16602 461 aa11.06□□□□□ -0.64
GGA3-221ENST00000614198 HSP90B2PQ58FF3 399 aa11.06□□□□□ -0.64
GGA3-221ENST00000614198 KCNK18Q7Z418 384 aa11.06□□□□□ -0.64
GGA3-221ENST00000614198 TADA2BQ86TJ2 420 aa11.06□□□□□ -0.64
GGA3-221ENST00000614198 KIAA1683Q9H0B3 1180 aa11.06□□□□□ -0.64
GGA3-221ENST00000614198 RANBP17Q9H2T7 1088 aaKnown RBP11.06□□□□□ -0.64
GGA3-221ENST00000614198 COL11A1P12107 1806 aaPredicted RBP11.06□□□□□ -0.64
GGA3-221ENST00000614198 PHIPQ8WWQ0 1821 aa11.06□□□□□ -0.64
GGA3-221ENST00000614198 OR52Z1P0C646 297 aa11.06□□□□□ -0.64
GGA3-221ENST00000614198 ATP1A3P13637 1013 aa11.06□□□□□ -0.64
GGA3-221ENST00000614198 DCAF15Q66K64 600 aa11.06□□□□□ -0.64
GGA3-221ENST00000614198 PAGE5Q96GU1 130 aa11.06□□□□□ -0.64
GGA3-221ENST00000614198 WDR24Q96S15 920 aa11.06□□□□□ -0.64
GGA3-221ENST00000614198 SLF1Q9BQI6 1058 aa11.06□□□□□ -0.64
GGA3-221ENST00000614198 BCAS3Q9H6U6 928 aa11.06□□□□□ -0.64
GGA3-221ENST00000614198 NMRK2Q9NPI5 230 aa11.06□□□□□ -0.64
GGA3-221ENST00000614198 FAN1Q9Y2M0 1017 aa11.06□□□□□ -0.64
GGA3-221ENST00000614198 PPP2R2CQ9Y2T4 447 aa11.06□□□□□ -0.64
GGA3-221ENST00000614198 AFG3L2Q9Y4W6 797 aa11.06□□□□□ -0.64
GGA3-221ENST00000614198 ESYT2A0FGR8 921 aa11.06□□□□□ -0.64
GGA3-221ENST00000614198 PPFIA4O75335 1185 aa11.06□□□□□ -0.64
GGA3-221ENST00000614198 ARHGAP4P98171 946 aa11.06□□□□□ -0.64
GGA3-221ENST00000614198 POSTNQ15063 836 aa11.06□□□□□ -0.64
GGA3-221ENST00000614198 PLEKHA4Q9H4M7 779 aa11.06□□□□□ -0.64
GGA3-221ENST00000614198 DOCK1Q14185 1865 aa11.05□□□□□ -0.64
GGA3-221ENST00000614198 FANCCQ00597 558 aa11.05□□□□□ -0.64
GGA3-221ENST00000614198 NCAPHQ15003 741 aa11.05□□□□□ -0.64
GGA3-221ENST00000614198 MTMR9Q96QG7 549 aa11.05□□□□□ -0.64
GGA3-221ENST00000614198 MED4Q9NPJ6 270 aa11.05□□□□□ -0.64
GGA3-221ENST00000614198 RAB21Q9UL25 225 aa11.05□□□□□ -0.64
GGA3-221ENST00000614198 TELO2Q9Y4R8 837 aa11.05□□□□□ -0.64
GGA3-221ENST00000614198 OTOFQ9HC10 1997 aa11.05□□□□□ -0.64
GGA3-221ENST00000614198 POTEB2H3BUK9 544 aa11.05□□□□□ -0.64
GGA3-221ENST00000614198 ZBTB39O15060 712 aa11.05□□□□□ -0.64
GGA3-221ENST00000614198 TRAPPC10P48553 1259 aa11.05□□□□□ -0.64
GGA3-221ENST00000614198 CACNB1Q02641 598 aaPredicted RBP11.05□□□□□ -0.64
GGA3-221ENST00000614198 GALNT17Q6IS24 598 aa11.05□□□□□ -0.64
GGA3-221ENST00000614198 PRPF38AQ8NAV1 312 aaKnown RBP11.05□□□□□ -0.64
GGA3-221ENST00000614198 CHURC1Q8WUH1 139 aa11.05□□□□□ -0.64
GGA3-221ENST00000614198 FAM107BQ9H098 131 aa11.05□□□□□ -0.64
GGA3-221ENST00000614198 L1RE1Q9UN81 338 aa11.05□□□□□ -0.64
GGA3-221ENST00000614198 ABCB11O95342 1321 aa11.05□□□□□ -0.64
GGA3-221ENST00000614198 DDX39AO00148 427 aaKnown RBP11.05□□□□□ -0.64
GGA3-221ENST00000614198 MEIS1O00470 390 aa11.05□□□□□ -0.64
GGA3-221ENST00000614198 VWA5AO00534 786 aa11.05□□□□□ -0.64
GGA3-221ENST00000614198 ARHGAP6O43182 974 aa11.05□□□□□ -0.64
GGA3-221ENST00000614198 CHMP2AO43633 222 aa11.05□□□□□ -0.64
GGA3-221ENST00000614198 PLCG1P19174 1290 aa11.05□□□□□ -0.64
GGA3-221ENST00000614198 MAP2K2P36507 400 aa11.05□□□□□ -0.64
GGA3-221ENST00000614198 STX17P56962 302 aa11.05□□□□□ -0.64
GGA3-221ENST00000614198 FSTL1Q12841 308 aa11.05□□□□□ -0.64
GGA3-221ENST00000614198 KLHL10Q6JEL2 608 aa11.05□□□□□ -0.64
GGA3-221ENST00000614198 NSMFQ6X4W1 530 aa11.05□□□□□ -0.64
GGA3-221ENST00000614198 GADL1Q6ZQY3 521 aa11.05□□□□□ -0.64
GGA3-221ENST00000614198 FAM71BQ8TC56 605 aa11.05□□□□□ -0.64
GGA3-221ENST00000614198 CLEC4DQ8WXI8 215 aa11.05□□□□□ -0.64
GGA3-221ENST00000614198 MED15Q96RN5 788 aa11.05□□□□□ -0.64
GGA3-221ENST00000614198 WDR18Q9BV38 432 aa11.05□□□□□ -0.64
GGA3-221ENST00000614198 FEM1BQ9UK73 627 aa11.05□□□□□ -0.64
GGA3-221ENST00000614198 FAM237AA0A1B0GTK4 181 aa11.04□□□□□ -0.64
GGA3-221ENST00000614198 SPDYE3A6NKU9 549 aa11.04□□□□□ -0.64
GGA3-221ENST00000614198 N4BP1O75113 896 aaKnown RBP11.04□□□□□ -0.64
GGA3-221ENST00000614198 CD44P16070 742 aaKnown RBP11.04□□□□□ -0.64
GGA3-221ENST00000614198 TMEM132BQ14DG7 1078 aa11.04□□□□□ -0.64
GGA3-221ENST00000614198 SUPT20HL1Q3ZLR7 823 aa11.04□□□□□ -0.64
GGA3-221ENST00000614198 RPAINQ86UA6 219 aa11.04□□□□□ -0.64
GGA3-221ENST00000614198 ANKRD20A12PQ8NF67 263 aa11.04□□□□□ -0.64
GGA3-221ENST00000614198 CPLX3Q8WVH0 158 aa11.04□□□□□ -0.64
GGA3-221ENST00000614198 FERMT2Q96AC1 680 aa11.04□□□□□ -0.64
GGA3-221ENST00000614198 LENG9Q96B70 501 aa11.04□□□□□ -0.64
GGA3-221ENST00000614198 SH2D3AQ9BRG2 576 aa11.04□□□□□ -0.64
GGA3-221ENST00000614198 DESI2Q9BSY9 194 aa11.04□□□□□ -0.64
GGA3-221ENST00000614198 MAN1B1Q9UKM7 699 aa11.04□□□□□ -0.64
GGA3-221ENST00000614198 MARCH6O60337 910 aa11.04□□□□□ -0.64
GGA3-221ENST00000614198 ERLIN1O75477 346 aa11.04□□□□□ -0.64
GGA3-221ENST00000614198 EIF2AK2P19525 551 aaKnown RBP11.04□□□□□ -0.64
GGA3-221ENST00000614198 GJA5P36382 358 aa11.04□□□□□ -0.64
GGA3-221ENST00000614198 DPYDQ12882 1025 aa11.04□□□□□ -0.64
GGA3-221ENST00000614198 PDXDC2PQ6P474 469 aa11.04□□□□□ -0.64
GGA3-221ENST00000614198 ZNF579Q8NAF0 562 aaKnown RBP11.04□□□□□ -0.64
GGA3-221ENST00000614198 LZTFL1Q9NQ48 299 aa11.04□□□□□ -0.64
GGA3-221ENST00000614198 PPP1R9AQ9ULJ8 1098 aa11.04□□□□□ -0.64
GGA3-221ENST00000614198 LAMA3Q16787 3333 aa11.03□□□□□ -0.64
GGA3-221ENST00000614198 WDR46O15213 610 aaKnown RBP11.03□□□□□ -0.64
GGA3-221ENST00000614198 RHOXF2BP0C7M4 288 aa11.03□□□□□ -0.64
GGA3-221ENST00000614198 UBA7P41226 1012 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms