RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 CNNM4Q6P4Q7 775 aa12.39□□□□□ -0.43
ATF3-211ENST00000613954 PAXIP1Q6ZW49 1069 aaPredicted RBP12.39□□□□□ -0.43
ATF3-211ENST00000613954 B4GALNT4Q76KP1 1039 aa12.39□□□□□ -0.43
ATF3-211ENST00000613954 CCDC84Q86UT8 332 aaPredicted RBP12.39□□□□□ -0.43
ATF3-211ENST00000613954 UPF1Q92900 1129 aaKnown RBP eCLIP12.39□□□□□ -0.438e-7■■■■■ 29.4
ATF3-211ENST00000613954 CCDC17Q96LX7 622 aa12.39□□□□□ -0.43
ATF3-211ENST00000613954 OSBPL9Q96SU4 736 aa12.39□□□□□ -0.43
ATF3-211ENST00000613954 C7orf25Q9BPX7 421 aa12.39□□□□□ -0.43
ATF3-211ENST00000613954 TAOK3Q9H2K8 898 aa12.39□□□□□ -0.43
ATF3-211ENST00000613954 TDRD3Q9H7E2 651 aaKnown RBP12.39□□□□□ -0.43
ATF3-211ENST00000613954 MTMR4Q9NYA4 1195 aa12.39□□□□□ -0.43
ATF3-211ENST00000613954 PI4KBQ9UBF8 816 aa12.39□□□□□ -0.43
ATF3-211ENST00000613954 PPP1R1BQ9UD71 204 aaPredicted RBP12.39□□□□□ -0.43
ATF3-211ENST00000613954 FAM169AQ9Y6X4 670 aa12.39□□□□□ -0.43
ATF3-211ENST00000613954 BRCA1P38398 1863 aaKnown RBP12.39□□□□□ -0.43
ATF3-211ENST00000613954 COL2A1P02458 1487 aaPredicted RBP12.39□□□□□ -0.43
ATF3-211ENST00000613954 M0R2N6 131 aa12.38□□□□□ -0.43
ATF3-211ENST00000613954 GNGT1P63211 74 aa12.38□□□□□ -0.43
ATF3-211ENST00000613954 TCP10Q12799 353 aa12.38□□□□□ -0.43
ATF3-211ENST00000613954 MIIPQ5JXC2 388 aa12.38□□□□□ -0.43
ATF3-211ENST00000613954 STAG2Q8N3U4 1231 aa12.38□□□□□ -0.43
ATF3-211ENST00000613954 AGBL3Q8NEM8 1001 aa12.38□□□□□ -0.43
ATF3-211ENST00000613954 PRMT6Q96LA8 375 aaPredicted RBP12.38□□□□□ -0.43
ATF3-211ENST00000613954 LRRC1Q9BTT6 524 aa12.38□□□□□ -0.43
ATF3-211ENST00000613954 DUSP10Q9Y6W6 482 aa12.38□□□□□ -0.43
ATF3-211ENST00000613954 DDTLA6NHG4 134 aaPredicted RBP12.38□□□□□ -0.43
ATF3-211ENST00000613954 SPDYE2BA6NHP3 402 aa12.38□□□□□ -0.43
ATF3-211ENST00000613954 PJA2O43164 708 aa12.38□□□□□ -0.43
ATF3-211ENST00000613954 SPDYE6P0CI01 402 aa12.38□□□□□ -0.43
ATF3-211ENST00000613954 KIF11P52732 1056 aa12.38□□□□□ -0.43
ATF3-211ENST00000613954 ANKRD40Q6AI12 368 aa12.38□□□□□ -0.43
ATF3-211ENST00000613954 ARHGAP27Q6ZUM4 889 aa12.38□□□□□ -0.43
ATF3-211ENST00000613954 OGFOD1Q8N543 542 aa12.38□□□□□ -0.43
ATF3-211ENST00000613954 RNF10Q8N5U6 811 aaKnown RBP12.38□□□□□ -0.43
ATF3-211ENST00000613954 TRIM9Q9C026 710 aa12.38□□□□□ -0.43
ATF3-211ENST00000613954 TMOD2Q9NZR1 351 aa12.38□□□□□ -0.43
ATF3-211ENST00000613954 FER1L6Q2WGJ9 1857 aa12.37□□□□□ -0.43
ATF3-211ENST00000613954 ZNF263O14978 683 aa12.37□□□□□ -0.43
ATF3-211ENST00000613954 AKR1B10O60218 316 aa12.37□□□□□ -0.43
ATF3-211ENST00000613954 KLK7P49862 253 aa12.37□□□□□ -0.43
ATF3-211ENST00000613954 DLGAP5Q15398 846 aa12.37□□□□□ -0.43
ATF3-211ENST00000613954 SWT1Q5T5J6 900 aaKnown RBP12.37□□□□□ -0.43
ATF3-211ENST00000613954 C8orf74Q6P047 294 aa12.37□□□□□ -0.43
ATF3-211ENST00000613954 SH3BP5LQ7L8J4 393 aa12.37□□□□□ -0.43
ATF3-211ENST00000613954 CABP7Q86V35 215 aa12.37□□□□□ -0.43
ATF3-211ENST00000613954 IFT20Q8IY31 132 aa12.37□□□□□ -0.43
ATF3-211ENST00000613954 PLCD3Q8N3E9 789 aa12.37□□□□□ -0.43
ATF3-211ENST00000613954 CEP89Q96ST8 783 aa12.37□□□□□ -0.43
ATF3-211ENST00000613954 EDEM3Q9BZQ6 932 aa12.37□□□□□ -0.43
ATF3-211ENST00000613954 DMGDHQ9UI17 866 aaKnown RBP12.37□□□□□ -0.43
ATF3-211ENST00000613954 PCDHA6Q9UN73 950 aa12.37□□□□□ -0.43
ATF3-211ENST00000613954 PCDHA8Q9Y5H6 950 aa12.37□□□□□ -0.43
ATF3-211ENST00000613954 CAPN6Q9Y6Q1 641 aa12.37□□□□□ -0.43
ATF3-211ENST00000613954 GRIN2DO15399 1336 aa12.37□□□□□ -0.43
ATF3-211ENST00000613954 ATRNL1Q5VV63 1379 aa12.37□□□□□ -0.43
ATF3-211ENST00000613954 SIPA1L1O43166 1804 aa12.37□□□□□ -0.43
ATF3-211ENST00000613954 ANKRD65E5RJM6 399 aa12.37□□□□□ -0.43
ATF3-211ENST00000613954 ZEB2O60315 1214 aa12.37□□□□□ -0.43
ATF3-211ENST00000613954 TTLL1O95922 423 aa12.37□□□□□ -0.43
ATF3-211ENST00000613954 INPP5BP32019 993 aa12.37□□□□□ -0.43
ATF3-211ENST00000613954 ASIC1P78348 528 aa12.37□□□□□ -0.43
ATF3-211ENST00000613954 CFAP221Q4G0U5 840 aa12.37□□□□□ -0.43
ATF3-211ENST00000613954 VWA3BQ502W6 1294 aa12.37□□□□□ -0.43
ATF3-211ENST00000613954 TYW1BQ6NUM6 668 aa12.37□□□□□ -0.43
ATF3-211ENST00000613954 JDP2Q8WYK2 163 aa12.37□□□□□ -0.43
ATF3-211ENST00000613954 SPZ1Q9BXG8 430 aa12.37□□□□□ -0.43
ATF3-211ENST00000613954 DNAJC18Q9H819 358 aa12.37□□□□□ -0.43
ATF3-211ENST00000613954 LUC7LQ9NQ29 371 aaKnown RBP12.37□□□□□ -0.43
ATF3-211ENST00000613954 GEMIN8Q9NWZ8 242 aaKnown RBP12.37□□□□□ -0.43
ATF3-211ENST00000613954 ARHGAP20Q9P2F6 1191 aa12.37□□□□□ -0.43
ATF3-211ENST00000613954 MTMR7Q9Y216 660 aa12.37□□□□□ -0.43
ATF3-211ENST00000613954 GREB1LQ9C091 1923 aaPredicted RBP12.36□□□□□ -0.43
ATF3-211ENST00000613954 PP2D1A8MPX8 630 aa12.36□□□□□ -0.43
ATF3-211ENST00000613954 KLRF2D3W0D1 207 aa12.36□□□□□ -0.43
ATF3-211ENST00000613954 PLCG1P19174 1290 aa12.36□□□□□ -0.43
ATF3-211ENST00000613954 SMARCA1P28370 1054 aa12.36□□□□□ -0.43
ATF3-211ENST00000613954 PTGER2P43116 358 aa12.36□□□□□ -0.43
ATF3-211ENST00000613954 CXCL9Q07325 125 aa12.36□□□□□ -0.43
ATF3-211ENST00000613954 ORC2Q13416 577 aaPredicted RBP12.36□□□□□ -0.43
ATF3-211ENST00000613954 MAN2A1Q16706 1144 aa12.36□□□□□ -0.43
ATF3-211ENST00000613954 HAUS3Q68CZ6 603 aa12.36□□□□□ -0.43
ATF3-211ENST00000613954 MCTP2Q6DN12 878 aa12.36□□□□□ -0.43
ATF3-211ENST00000613954 MICALCLQ6ZW33 695 aa12.36□□□□□ -0.43
ATF3-211ENST00000613954 MTMR14Q8NCE2 650 aa12.36□□□□□ -0.43
ATF3-211ENST00000613954 RRP36Q96EU6 259 aaKnown RBP12.36□□□□□ -0.43
ATF3-211ENST00000613954 NOX5Q96PH1 765 aa12.36□□□□□ -0.43
ATF3-211ENST00000613954 TMEM60Q9H2L4 133 aa12.36□□□□□ -0.43
ATF3-211ENST00000613954 NDST4Q9H3R1 872 aa12.36□□□□□ -0.43
ATF3-211ENST00000613954 ZBTB12Q9Y330 459 aaPredicted RBP12.36□□□□□ -0.43
ATF3-211ENST00000613954 LTBP3Q9NS15 1303 aa12.35□□□□□ -0.43
ATF3-211ENST00000613954 SSU72P8A0A1W2PR75 194 aa12.35□□□□□ -0.43
ATF3-211ENST00000613954 NFKBIEO00221 500 aa12.35□□□□□ -0.43
ATF3-211ENST00000613954 MPHOSPH10O00566 681 aaKnown RBP12.35□□□□□ -0.43
ATF3-211ENST00000613954 MOCS3O95396 460 aa12.35□□□□□ -0.43
ATF3-211ENST00000613954 OR52Z1P0C646 297 aa12.35□□□□□ -0.43
ATF3-211ENST00000613954 MAGEA1P43355 309 aa12.35□□□□□ -0.43
ATF3-211ENST00000613954 STK4Q13043 487 aa12.35□□□□□ -0.43
ATF3-211ENST00000613954 PAK2Q13177 524 aa12.35□□□□□ -0.43
ATF3-211ENST00000613954 INF2Q27J81 1249 aa12.35□□□□□ -0.43
ATF3-211ENST00000613954 SLC35G1Q2M3R5 365 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms