RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 ZNF713Q8N859 430 aaPredicted RBP26.09■■□□□ 1.77
FAM228B-208ENST00000613899 KCNB2Q92953 911 aa26.09■■□□□ 1.77
FAM228B-208ENST00000613899 NKX2-4Q9H2Z4 354 aa26.09■■□□□ 1.77
FAM228B-208ENST00000613899 TUT1Q9H6E5 874 aaKnown RBP26.09■■□□□ 1.77
FAM228B-208ENST00000613899 PCDHA11Q9Y5I1 949 aa26.09■■□□□ 1.77
FAM228B-208ENST00000613899 REC8O95072 547 aa26.08■■□□□ 1.77
FAM228B-208ENST00000613899 NEFLP07196 543 aa26.08■■□□□ 1.77
FAM228B-208ENST00000613899 HSPA4P34932 840 aa26.08■■□□□ 1.77
FAM228B-208ENST00000613899 NAPAP54920 295 aa26.08■■□□□ 1.77
FAM228B-208ENST00000613899 WWC2Q6AWC2 1192 aa26.08■■□□□ 1.77
FAM228B-208ENST00000613899 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.08■■□□□ 1.77
FAM228B-208ENST00000613899 GAS2L1Q99501 681 aaPredicted RBP26.08■■□□□ 1.77
FAM228B-208ENST00000613899 GPR20Q99678 358 aa26.08■■□□□ 1.77
FAM228B-208ENST00000613899 BCAS3Q9H6U6 928 aa26.08■■□□□ 1.77
FAM228B-208ENST00000613899 ZNF215Q9UL58 517 aaPredicted RBP26.08■■□□□ 1.77
FAM228B-208ENST00000613899 YBX2Q9Y2T7 364 aaKnown RBP26.08■■□□□ 1.77
FAM228B-208ENST00000613899 FUT2Q10981 343 aa26.07■■□□□ 1.76
FAM228B-208ENST00000613899 PHOSPHO2Q8TCD6 241 aa26.07■■□□□ 1.76
FAM228B-208ENST00000613899 JAKMIP1Q96N16 626 aaKnown RBP26.07■■□□□ 1.76
FAM228B-208ENST00000613899 PCDHA6Q9UN73 950 aa26.07■■□□□ 1.76
FAM228B-208ENST00000613899 PCDHA8Q9Y5H6 950 aa26.07■■□□□ 1.76
FAM228B-208ENST00000613899 MYO9BQ13459 2157 aa26.07■■□□□ 1.76
FAM228B-208ENST00000613899 C17orf102A2RUQ5 167 aa26.06■■□□□ 1.76
FAM228B-208ENST00000613899 RABGGTBP53611 331 aa26.06■■□□□ 1.76
FAM228B-208ENST00000613899 NAP1L2Q9ULW6 460 aaPredicted RBP26.06■■□□□ 1.76
FAM228B-208ENST00000613899 EYSQ5T1H1 3165 aa26.06■■□□□ 1.76
FAM228B-208ENST00000613899 CCDC196A0A1B0GTZ2 297 aa26.05■■□□□ 1.76
FAM228B-208ENST00000613899 CXCL10P02778 98 aa26.05■■□□□ 1.76
FAM228B-208ENST00000613899 SMIM10L2AP0DMW4 78 aa26.05■■□□□ 1.76
FAM228B-208ENST00000613899 SMIM10L2BP0DMW5 78 aa26.05■■□□□ 1.76
FAM228B-208ENST00000613899 HOXC8P31273 242 aa26.05■■□□□ 1.76
FAM228B-208ENST00000613899 ZNF200P98182 395 aaPredicted RBP26.05■■□□□ 1.76
FAM228B-208ENST00000613899 MTMR1Q13613 665 aa26.05■■□□□ 1.76
FAM228B-208ENST00000613899 TRIM71Q2Q1W2 868 aaKnown RBP26.05■■□□□ 1.76
FAM228B-208ENST00000613899 PPP2R2DQ66LE6 453 aa26.05■■□□□ 1.76
FAM228B-208ENST00000613899 BLOC1S2Q6QNY1 142 aa26.05■■□□□ 1.76
FAM228B-208ENST00000613899 SERINC5Q86VE9 423 aa26.05■■□□□ 1.76
FAM228B-208ENST00000613899 PRDM12Q9H4Q4 367 aa26.05■■□□□ 1.76
FAM228B-208ENST00000613899 RIC8AQ9NPQ8 531 aa26.05■■□□□ 1.76
FAM228B-208ENST00000613899 SNX14Q9Y5W7 946 aa26.05■■□□□ 1.76
FAM228B-208ENST00000613899 UBIAD1Q9Y5Z9 338 aa26.05■■□□□ 1.76
FAM228B-208ENST00000613899 CHD9Q3L8U1 2897 aa26.05■■□□□ 1.76
FAM228B-208ENST00000613899 UNC80Q8N2C7 3258 aa26.04■■□□□ 1.76
FAM228B-208ENST00000613899 ITGB5P18084 799 aa26.04■■□□□ 1.76
FAM228B-208ENST00000613899 KCNJ6P48051 423 aa26.04■■□□□ 1.76
FAM228B-208ENST00000613899 METAP2P50579 478 aaKnown RBP eCLIP26.04■■□□□ 1.76
FAM228B-208ENST00000613899 ADCY7P51828 1080 aa26.04■■□□□ 1.76
FAM228B-208ENST00000613899 SP4Q02446 784 aa26.04■■□□□ 1.76
FAM228B-208ENST00000613899 CNKSR3Q6P9H4 555 aa26.04■■□□□ 1.76
FAM228B-208ENST00000613899 ATP6V0A1Q93050 837 aa26.04■■□□□ 1.76
FAM228B-208ENST00000613899 GLT8D2Q9H1C3 349 aa26.04■■□□□ 1.76
FAM228B-208ENST00000613899 V9GY48 417 aaPredicted RBP26.04■■□□□ 1.76
FAM228B-208ENST00000613899 MAFGO15525 162 aa26.03■■□□□ 1.76
FAM228B-208ENST00000613899 FOSP01100 380 aaPredicted RBP26.03■■□□□ 1.76
FAM228B-208ENST00000613899 GNAT1P11488 350 aa26.03■■□□□ 1.76
FAM228B-208ENST00000613899 KCNA2P16389 499 aa26.03■■□□□ 1.76
FAM228B-208ENST00000613899 CDC27P30260 824 aa26.03■■□□□ 1.76
FAM228B-208ENST00000613899 HIC1Q14526 733 aa26.03■■□□□ 1.76
FAM228B-208ENST00000613899 GPNMBQ14956 572 aa26.03■■□□□ 1.76
FAM228B-208ENST00000613899 ZNF618Q5T7W0 954 aa26.03■■□□□ 1.76
FAM228B-208ENST00000613899 TYW1BQ6NUM6 668 aa26.03■■□□□ 1.76
FAM228B-208ENST00000613899 Q6ZUG5 572 aa26.03■■□□□ 1.76
FAM228B-208ENST00000613899 WNT8BQ93098 351 aa26.03■■□□□ 1.76
FAM228B-208ENST00000613899 FAM217BQ9NTX9 383 aaPredicted RBP26.03■■□□□ 1.76
FAM228B-208ENST00000613899 BARHL2Q9NY43 387 aa26.03■■□□□ 1.76
FAM228B-208ENST00000613899 EMSYQ7Z589 1322 aa26.03■■□□□ 1.76
FAM228B-208ENST00000613899 STXBP3O00186 592 aa26.02■■□□□ 1.76
FAM228B-208ENST00000613899 DLL1O00548 723 aa26.02■■□□□ 1.76
FAM228B-208ENST00000613899 NBNO60934 754 aa26.02■■□□□ 1.76
FAM228B-208ENST00000613899 CPA1P15085 419 aa26.02■■□□□ 1.76
FAM228B-208ENST00000613899 MYOGP15173 224 aa26.02■■□□□ 1.76
FAM228B-208ENST00000613899 PSMA5P28066 241 aa26.02■■□□□ 1.76
FAM228B-208ENST00000613899 APOBRQ0VD83 1088 aa26.02■■□□□ 1.76
FAM228B-208ENST00000613899 UTP14CQ5TAP6 766 aaKnown RBP26.02■■□□□ 1.76
FAM228B-208ENST00000613899 TRIM50Q86XT4 487 aa26.02■■□□□ 1.76
FAM228B-208ENST00000613899 BRF1Q92994 677 aa26.02■■□□□ 1.76
FAM228B-208ENST00000613899 JADE2Q9NQC1 790 aa26.02■■□□□ 1.76
FAM228B-208ENST00000613899 NID2Q14112 1375 aa26.02■■□□□ 1.76
FAM228B-208ENST00000613899 PTPRSQ13332 1948 aa26.02■■□□□ 1.76
FAM228B-208ENST00000613899 A0A0C4DFX4 3053 aa26.01■■□□□ 1.75
FAM228B-208ENST00000613899 KIF28PB7ZC32 967 aa26.01■■□□□ 1.75
FAM228B-208ENST00000613899 EPB41L2O43491 1005 aaKnown RBP26.01■■□□□ 1.75
FAM228B-208ENST00000613899 EFCAB14O75071 495 aa26.01■■□□□ 1.75
FAM228B-208ENST00000613899 ATP9AO75110 1047 aa26.01■■□□□ 1.75
FAM228B-208ENST00000613899 AP3B2Q13367 1082 aa26.01■■□□□ 1.75
FAM228B-208ENST00000613899 TRAF7Q6Q0C0 670 aa26.01■■□□□ 1.75
FAM228B-208ENST00000613899 HERC6Q8IVU3 1022 aa26.01■■□□□ 1.75
FAM228B-208ENST00000613899 FBXL16Q8N461 479 aa26.01■■□□□ 1.75
FAM228B-208ENST00000613899 KAT6AQ92794 2004 aa26.01■■□□□ 1.75
FAM228B-208ENST00000613899 RNPEPQ9H4A4 650 aa26.01■■□□□ 1.75
FAM228B-208ENST00000613899 CAND2O75155 1236 aa26■■□□□ 1.75
FAM228B-208ENST00000613899 RPS6KB1P23443 525 aa26■■□□□ 1.75
FAM228B-208ENST00000613899 TCF7P36402 384 aaPredicted RBP26■■□□□ 1.75
FAM228B-208ENST00000613899 THPOP40225 353 aa26■■□□□ 1.75
FAM228B-208ENST00000613899 WDR5P61964 334 aaKnown RBP26■■□□□ 1.75
FAM228B-208ENST00000613899 SEPT1Q8WYJ6 367 aa26■■□□□ 1.75
FAM228B-208ENST00000613899 ANO3Q9BYT9 981 aa26■■□□□ 1.75
FAM228B-208ENST00000613899 ABHD14A-ACY1A0A1B0GW23 586 aa25.99■■□□□ 1.75
FAM228B-208ENST00000613899 SMCO2A6NFE2 343 aa25.99■■□□□ 1.75
FAM228B-208ENST00000613899 RSPH10B2B2RC85 870 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms