RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 TIGD1Q96MW7 591 aa15.48■□□□□ 0.07
TMEM254-213ENST00000613758 CFHR5Q9BXR6 569 aa15.48■□□□□ 0.07
TMEM254-213ENST00000613758 CCDC39Q9UFE4 941 aa15.48■□□□□ 0.07
TMEM254-213ENST00000613758 ICAM3P32942 547 aa15.48■□□□□ 0.07
TMEM254-213ENST00000613758 PPP2R5CQ13362 524 aa15.48■□□□□ 0.07
TMEM254-213ENST00000613758 ZRSR1Q15695 479 aaKnown RBP15.48■□□□□ 0.07
TMEM254-213ENST00000613758 EEPD1Q7L9B9 569 aa15.48■□□□□ 0.07
TMEM254-213ENST00000613758 CKAP2LQ8IYA6 745 aa15.48■□□□□ 0.07
TMEM254-213ENST00000613758 RASSF8Q8NHQ8 419 aa15.48■□□□□ 0.07
TMEM254-213ENST00000613758 SNX29Q8TEQ0 813 aa15.48■□□□□ 0.07
TMEM254-213ENST00000613758 SDF4Q9BRK5 362 aa15.48■□□□□ 0.07
TMEM254-213ENST00000613758 PYM1Q9BRP8 204 aaKnown RBP15.48■□□□□ 0.07
TMEM254-213ENST00000613758 SERTAD1Q9UHV2 236 aa15.48■□□□□ 0.07
TMEM254-213ENST00000613758 DDX39AO00148 427 aaKnown RBP15.47■□□□□ 0.07
TMEM254-213ENST00000613758 TNPO2O14787 897 aaKnown RBP15.47■□□□□ 0.07
TMEM254-213ENST00000613758 RRAGBQ5VZM2 374 aa15.47■□□□□ 0.07
TMEM254-213ENST00000613758 KRBA2Q6ZNG9 492 aa15.47■□□□□ 0.07
TMEM254-213ENST00000613758 ARMCX2Q7L311 632 aa15.47■□□□□ 0.07
TMEM254-213ENST00000613758 IQUBQ8NA54 791 aa15.47■□□□□ 0.07
TMEM254-213ENST00000613758 CNNM3Q8NE01 707 aa15.47■□□□□ 0.07
TMEM254-213ENST00000613758 ERMNQ8TAM6 284 aa15.47■□□□□ 0.07
TMEM254-213ENST00000613758 NPLOC4Q8TAT6 608 aa15.47■□□□□ 0.07
TMEM254-213ENST00000613758 CALML4Q96GE6 196 aa15.47■□□□□ 0.07
TMEM254-213ENST00000613758 MAML3Q96JK9 1138 aa15.47■□□□□ 0.07
TMEM254-213ENST00000613758 PLIN2Q99541 437 aa15.47■□□□□ 0.07
TMEM254-213ENST00000613758 NUDT12Q9BQG2 462 aa15.47■□□□□ 0.07
TMEM254-213ENST00000613758 UNC45AQ9H3U1 944 aa15.47■□□□□ 0.07
TMEM254-213ENST00000613758 EML1O00423 815 aa15.46■□□□□ 0.07
TMEM254-213ENST00000613758 CHMP2AO43633 222 aa15.46■□□□□ 0.07
TMEM254-213ENST00000613758 CTGFP29279 349 aa15.46■□□□□ 0.07
TMEM254-213ENST00000613758 LACTBP83111 547 aaPredicted RBP15.46■□□□□ 0.07
TMEM254-213ENST00000613758 USP6NLQ92738 828 aa15.46■□□□□ 0.07
TMEM254-213ENST00000613758 DISC1Q9NRI5 854 aa15.46■□□□□ 0.07
TMEM254-213ENST00000613758 USP25Q9UHP3 1055 aa15.46■□□□□ 0.07
TMEM254-213ENST00000613758 GJD2Q9UKL4 321 aa15.46■□□□□ 0.07
TMEM254-213ENST00000613758 STK24Q9Y6E0 443 aa15.46■□□□□ 0.07
TMEM254-213ENST00000613758 ACTN4O43707 911 aaKnown RBP15.46■□□□□ 0.07
TMEM254-213ENST00000613758 KCNA2P16389 499 aa15.46■□□□□ 0.07
TMEM254-213ENST00000613758 CCT6AP40227 531 aaKnown RBP15.46■□□□□ 0.07
TMEM254-213ENST00000613758 PSMC4P43686 418 aa15.46■□□□□ 0.07
TMEM254-213ENST00000613758 FCGRTP55899 365 aa15.46■□□□□ 0.07
TMEM254-213ENST00000613758 E2F4Q16254 413 aa15.46■□□□□ 0.07
TMEM254-213ENST00000613758 B3GNT9Q6UX72 402 aa15.46■□□□□ 0.07
TMEM254-213ENST00000613758 MAMDC4Q6UXC1 1216 aa15.46■□□□□ 0.07
TMEM254-213ENST00000613758 CTAGE5O15320 804 aa15.45■□□□□ 0.06
TMEM254-213ENST00000613758 SLFN14P0C7P3 912 aa15.45■□□□□ 0.06
TMEM254-213ENST00000613758 PLCG1P19174 1290 aa15.45■□□□□ 0.06
TMEM254-213ENST00000613758 STAT6P42226 847 aa15.45■□□□□ 0.06
TMEM254-213ENST00000613758 SP2Q02086 613 aa15.45■□□□□ 0.06
TMEM254-213ENST00000613758 SP3Q02447 781 aa15.45■□□□□ 0.06
TMEM254-213ENST00000613758 GRB10Q13322 594 aa15.45■□□□□ 0.06
TMEM254-213ENST00000613758 CEP57L1Q8IYX8 460 aa15.45■□□□□ 0.06
TMEM254-213ENST00000613758 RNF214Q8ND24 703 aa15.45■□□□□ 0.06
TMEM254-213ENST00000613758 CDK5RAP3Q96JB5 506 aa15.45■□□□□ 0.06
TMEM254-213ENST00000613758 PNMA5Q96PV4 448 aa15.45■□□□□ 0.06
TMEM254-213ENST00000613758 ARHGAP39Q9C0H5 1083 aa15.45■□□□□ 0.06
TMEM254-213ENST00000613758 SLC26A4O43511 780 aa15.45■□□□□ 0.06
TMEM254-213ENST00000613758 HOXC6P09630 235 aa15.45■□□□□ 0.06
TMEM254-213ENST00000613758 TGFB3P10600 412 aa15.45■□□□□ 0.06
TMEM254-213ENST00000613758 HSPA6P17066 643 aa15.45■□□□□ 0.06
TMEM254-213ENST00000613758 RGS2P41220 211 aa15.45■□□□□ 0.06
TMEM254-213ENST00000613758 TYRO3Q06418 890 aa15.45■□□□□ 0.06
TMEM254-213ENST00000613758 HAUS3Q68CZ6 603 aa15.45■□□□□ 0.06
TMEM254-213ENST00000613758 FBXO16Q8IX29 292 aaPredicted RBP15.45■□□□□ 0.06
TMEM254-213ENST00000613758 SOCS4Q8WXH5 440 aa15.45■□□□□ 0.06
TMEM254-213ENST00000613758 TRIM47Q96LD4 638 aa15.45■□□□□ 0.06
TMEM254-213ENST00000613758 EIF2AK1Q9BQI3 630 aaKnown RBP15.45■□□□□ 0.06
TMEM254-213ENST00000613758 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.45■□□□□ 0.06
TMEM254-213ENST00000613758 NFASCO94856 1347 aa15.44■□□□□ 0.06
TMEM254-213ENST00000613758 MED24O75448 989 aa15.44■□□□□ 0.06
TMEM254-213ENST00000613758 CCDC192P0DO97 292 aa15.44■□□□□ 0.06
TMEM254-213ENST00000613758 CYP2B6P20813 491 aa15.44■□□□□ 0.06
TMEM254-213ENST00000613758 EPHA7Q15375 998 aa15.44■□□□□ 0.06
TMEM254-213ENST00000613758 ECM1Q16610 540 aa15.44■□□□□ 0.06
TMEM254-213ENST00000613758 KANK3Q6NY19 840 aa15.44■□□□□ 0.06
TMEM254-213ENST00000613758 KCNV1Q6PIU1 500 aa15.44■□□□□ 0.06
TMEM254-213ENST00000613758 SENP7Q9BQF6 1050 aa15.44■□□□□ 0.06
TMEM254-213ENST00000613758 TINF2Q9BSI4 451 aa15.44■□□□□ 0.06
TMEM254-213ENST00000613758 BCAS3Q9H6U6 928 aa15.44■□□□□ 0.06
TMEM254-213ENST00000613758 TCEAL9Q9UHQ7 104 aa15.44■□□□□ 0.06
TMEM254-213ENST00000613758 ZNF236Q9UL36 1845 aa15.44■□□□□ 0.06
TMEM254-213ENST00000613758 KDM3AQ9Y4C1 1321 aa15.44■□□□□ 0.06
TMEM254-213ENST00000613758 PLXNA1Q9UIW2 1896 aa15.44■□□□□ 0.06
TMEM254-213ENST00000613758 SNAI1O95863 264 aaPredicted RBP15.43■□□□□ 0.06
TMEM254-213ENST00000613758 SPATA31C1P0DKV0 1188 aa15.43■□□□□ 0.06
TMEM254-213ENST00000613758 RPA1P27694 616 aa15.43■□□□□ 0.06
TMEM254-213ENST00000613758 C1QTNF8P60827 252 aa15.43■□□□□ 0.06
TMEM254-213ENST00000613758 KRT76Q01546 638 aa15.43■□□□□ 0.06
TMEM254-213ENST00000613758 KIF22Q14807 665 aa15.43■□□□□ 0.06
TMEM254-213ENST00000613758 TMEM119Q4V9L6 283 aa15.43■□□□□ 0.06
TMEM254-213ENST00000613758 NAALADL2Q58DX5 795 aa15.43■□□□□ 0.06
TMEM254-213ENST00000613758 HYIQ5T013 277 aa15.43■□□□□ 0.06
TMEM254-213ENST00000613758 PDXDC2PQ6P474 469 aa15.43■□□□□ 0.06
TMEM254-213ENST00000613758 MIER3Q7Z3K6 550 aa15.43■□□□□ 0.06
TMEM254-213ENST00000613758 CATSPER3Q86XQ3 398 aa15.43■□□□□ 0.06
TMEM254-213ENST00000613758 ELOA2Q8IYF1 753 aaPredicted RBP15.43■□□□□ 0.06
TMEM254-213ENST00000613758 MSL3Q8N5Y2 521 aaKnown RBP15.43■□□□□ 0.06
TMEM254-213ENST00000613758 POLR3CQ9BUI4 534 aaPredicted RBP15.43■□□□□ 0.06
TMEM254-213ENST00000613758 VTA1Q9NP79 307 aa15.43■□□□□ 0.06
TMEM254-213ENST00000613758 SYNGAP1Q96PV0 1343 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms